RNA–Protein interactions for RNA: ENST00000425451.2

HDAC7-208, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-208ENST00000425451 LINC00311Q8N616 119 aa13.73□□□□□ -0.21
HDAC7-208ENST00000425451 TNFAIP8L1Q8WVP5 186 aa13.73□□□□□ -0.21
HDAC7-208ENST00000425451 LGALS12Q96DT0 336 aa13.73□□□□□ -0.21
HDAC7-208ENST00000425451 PDCD1LG2Q9BQ51 273 aa13.73□□□□□ -0.21
HDAC7-208ENST00000425451 HSPB9Q9BQS6 159 aa13.73□□□□□ -0.21
HDAC7-208ENST00000425451 DPCDQ9BVM2 203 aaPredicted RBP13.73□□□□□ -0.21
HDAC7-208ENST00000425451 IMPAD1Q9NX62 359 aa13.73□□□□□ -0.21
HDAC7-208ENST00000425451 AASSQ9UDR5 926 aa13.73□□□□□ -0.21
HDAC7-208ENST00000425451 TENM2Q9NT68 2774 aa13.72□□□□□ -0.21
HDAC7-208ENST00000425451 SAC3D1A6NKF1 404 aa13.72□□□□□ -0.21
HDAC7-208ENST00000425451 FCGR1AP12314 374 aa13.72□□□□□ -0.21
HDAC7-208ENST00000425451 GZMHP20718 246 aa13.72□□□□□ -0.21
HDAC7-208ENST00000425451 GALEQ14376 348 aa13.72□□□□□ -0.21
HDAC7-208ENST00000425451 MEDAGQ5VYS4 303 aa13.72□□□□□ -0.21
HDAC7-208ENST00000425451 SYS1Q8N2H4 156 aa13.72□□□□□ -0.21
HDAC7-208ENST00000425451 C8orf31Q8N9H6 132 aa13.72□□□□□ -0.21
HDAC7-208ENST00000425451 OR52M1Q8NGK5 317 aa13.72□□□□□ -0.21
HDAC7-208ENST00000425451 RTN4IP1Q8WWV3 396 aaPredicted RBP13.72□□□□□ -0.21
HDAC7-208ENST00000425451 S1PR3Q99500 378 aa13.72□□□□□ -0.21
HDAC7-208ENST00000425451 ALG8Q9BVK2 526 aa13.72□□□□□ -0.21
HDAC7-208ENST00000425451 IFT22Q9H7X7 185 aa13.72□□□□□ -0.21
HDAC7-208ENST00000425451 TMEM212A6NML5 194 aa13.71□□□□□ -0.21
HDAC7-208ENST00000425451 MOSP00540 346 aa13.71□□□□□ -0.21
HDAC7-208ENST00000425451 RAB3AP20336 220 aa13.71□□□□□ -0.21
HDAC7-208ENST00000425451 PSMB8P28062 276 aa13.71□□□□□ -0.21
HDAC7-208ENST00000425451 CD1BP29016 333 aa13.71□□□□□ -0.21
HDAC7-208ENST00000425451 RSU1Q15404 277 aa13.71□□□□□ -0.21
HDAC7-208ENST00000425451 SATL1Q86VE3 508 aa13.71□□□□□ -0.21
HDAC7-208ENST00000425451 FAM71E2Q8N5Q1 922 aa13.71□□□□□ -0.21
HDAC7-208ENST00000425451 OR5AK2Q8NH90 309 aa13.71□□□□□ -0.21
HDAC7-208ENST00000425451 UBALD1Q8TB05 177 aa13.71□□□□□ -0.21
HDAC7-208ENST00000425451 C4orf3Q8WVX3 66 aa13.71□□□□□ -0.21
HDAC7-208ENST00000425451 GPER1Q99527 375 aa13.71□□□□□ -0.21
HDAC7-208ENST00000425451 FAM118AQ9NWS6 357 aa13.71□□□□□ -0.21
HDAC7-208ENST00000425451 DHDHQ9UQ10 334 aa13.71□□□□□ -0.21
HDAC7-208ENST00000425451 ZNF256Q9Y2P7 627 aaPredicted RBP13.71□□□□□ -0.21
HDAC7-208ENST00000425451 CDRT1O95170 752 aa13.7□□□□□ -0.22
HDAC7-208ENST00000425451 HTR3BO95264 441 aa13.7□□□□□ -0.22
HDAC7-208ENST00000425451 IGF1P05019 195 aa13.7□□□□□ -0.22
HDAC7-208ENST00000425451 ALPLP05186 524 aa13.7□□□□□ -0.22
HDAC7-208ENST00000425451 RPSAP08865 295 aaKnown RBP13.7□□□□□ -0.22
HDAC7-208ENST00000425451 CHATP28329 748 aa13.7□□□□□ -0.22
HDAC7-208ENST00000425451 VHLP40337 213 aa13.7□□□□□ -0.22
HDAC7-208ENST00000425451 F2RL1P55085 397 aa13.7□□□□□ -0.22
HDAC7-208ENST00000425451 KIAA0141Q14154 515 aaPredicted RBP13.7□□□□□ -0.22
HDAC7-208ENST00000425451 ZNF260Q3ZCT1 412 aa13.7□□□□□ -0.22
HDAC7-208ENST00000425451 NHLRC3Q5JS37 347 aa13.7□□□□□ -0.22
HDAC7-208ENST00000425451 MYOZ3Q8TDC0 251 aa13.7□□□□□ -0.22
HDAC7-208ENST00000425451 RGP1Q92546 391 aaPredicted RBP13.7□□□□□ -0.22
HDAC7-208ENST00000425451 ARL11Q969Q4 196 aa13.7□□□□□ -0.22
HDAC7-208ENST00000425451 GFOD1Q9NXC2 390 aa13.7□□□□□ -0.22
HDAC7-208ENST00000425451 ST3GAL6Q9Y274 331 aa13.7□□□□□ -0.22
HDAC7-208ENST00000425451 IGHV3-43A0A0B4J1X8 118 aa13.69□□□□□ -0.22
HDAC7-208ENST00000425451 TMEM30CPA0ZSE6 113 aa13.69□□□□□ -0.22
HDAC7-208ENST00000425451 SDCBPO00560 298 aaPredicted RBP13.69□□□□□ -0.22
HDAC7-208ENST00000425451 SLC31A2O15432 143 aa13.69□□□□□ -0.22
HDAC7-208ENST00000425451 RRP9O43818 475 aaKnown RBP13.69□□□□□ -0.22
HDAC7-208ENST00000425451 IGHV3-43DP0DP04 118 aa13.69□□□□□ -0.22
HDAC7-208ENST00000425451 GABRB1P18505 474 aa13.69□□□□□ -0.22
HDAC7-208ENST00000425451 RBM11P57052 281 aaKnown RBP13.69□□□□□ -0.22
HDAC7-208ENST00000425451 CASC10Q5T4H9 136 aa13.69□□□□□ -0.22
HDAC7-208ENST00000425451 ASPHD1Q5U4P2 390 aa13.69□□□□□ -0.22
HDAC7-208ENST00000425451 C1orf146Q5VVC0 180 aa13.69□□□□□ -0.22
HDAC7-208ENST00000425451 OR11H1Q8NG94 326 aa13.69□□□□□ -0.22
HDAC7-208ENST00000425451 OR8H1Q8NGG4 311 aa13.69□□□□□ -0.22
HDAC7-208ENST00000425451 CCDC107Q8WV48 283 aa13.69□□□□□ -0.22
HDAC7-208ENST00000425451 TSEN15Q8WW01 171 aaKnown RBP13.69□□□□□ -0.22
HDAC7-208ENST00000425451 CPNE2Q96FN4 548 aaPredicted RBP13.69□□□□□ -0.22
HDAC7-208ENST00000425451 RASL11BQ9BPW5 248 aa13.69□□□□□ -0.22
HDAC7-208ENST00000425451 FAM192AQ9GZU8 254 aa13.69□□□□□ -0.22
HDAC7-208ENST00000425451 ERVK13-1Q9NX77 482 aa13.69□□□□□ -0.22
HDAC7-208ENST00000425451 TAS2R4Q9NYW5 299 aa13.69□□□□□ -0.22
HDAC7-208ENST00000425451 IL36GQ9NZH8 169 aa13.69□□□□□ -0.22
HDAC7-208ENST00000425451 ZNF580Q9UK33 172 aa13.69□□□□□ -0.22
HDAC7-208ENST00000425451 SIRT4Q9Y6E7 314 aaPredicted RBP13.69□□□□□ -0.22
HDAC7-208ENST00000425451 GEMIN2O14893 280 aaKnown RBP13.68□□□□□ -0.22
HDAC7-208ENST00000425451 MAGEB3O15480 346 aa13.68□□□□□ -0.22
HDAC7-208ENST00000425451 ORC5O43913 435 aa13.68□□□□□ -0.22
HDAC7-208ENST00000425451 OR7C1O76099 320 aaPredicted RBP13.68□□□□□ -0.22
HDAC7-208ENST00000425451 SOX6P35712 828 aa13.68□□□□□ -0.22
HDAC7-208ENST00000425451 SOX2P48431 317 aa13.68□□□□□ -0.22
HDAC7-208ENST00000425451 ZNF134P52741 427 aa13.68□□□□□ -0.22
HDAC7-208ENST00000425451 ZIK1Q3SY52 487 aaPredicted RBP13.68□□□□□ -0.22
HDAC7-208ENST00000425451 ZNF439Q8NDP4 499 aa13.68□□□□□ -0.22
HDAC7-208ENST00000425451 OR52N1Q8NH53 320 aa13.68□□□□□ -0.22
HDAC7-208ENST00000425451 MRPL48Q96GC5 212 aaKnown RBP13.68□□□□□ -0.22
HDAC7-208ENST00000425451 KCTD7Q96MP8 289 aa13.68□□□□□ -0.22
HDAC7-208ENST00000425451 JAM3Q9BX67 310 aa13.68□□□□□ -0.22
HDAC7-208ENST00000425451 I3L521 148 aa13.67□□□□□ -0.22
HDAC7-208ENST00000425451 MT-ND4P03905 459 aa13.67□□□□□ -0.22
HDAC7-208ENST00000425451 VDAC1P21796 283 aa13.67□□□□□ -0.22
HDAC7-208ENST00000425451 GTF2A1P52655 376 aaPredicted RBP13.67□□□□□ -0.22
HDAC7-208ENST00000425451 ZNF137PP52743 207 aa13.67□□□□□ -0.22
HDAC7-208ENST00000425451 MRPL28Q13084 256 aaKnown RBP13.67□□□□□ -0.22
HDAC7-208ENST00000425451 Q3ZCU0 254 aa13.67□□□□□ -0.22
HDAC7-208ENST00000425451 KLHL22Q53GT1 634 aa13.67□□□□□ -0.22
HDAC7-208ENST00000425451 ZNF497Q6ZNH5 498 aa13.67□□□□□ -0.22
HDAC7-208ENST00000425451 SLC25A48Q6ZT89 311 aaKnown RBP13.67□□□□□ -0.22
HDAC7-208ENST00000425451 SBSPONQ8IVN8 264 aa13.67□□□□□ -0.22
HDAC7-208ENST00000425451 MUC7Q8TAX7 377 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms