RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 HPSE2Q8WWQ2 592 aa11.19□□□□□ -0.62
COL12A1-205ENST00000425443 FAM173AQ9BQD7 235 aa11.19□□□□□ -0.62
COL12A1-205ENST00000425443 HES7Q9BYE0 225 aa11.19□□□□□ -0.62
COL12A1-205ENST00000425443 NECAP2Q9NVZ3 263 aa11.19□□□□□ -0.62
COL12A1-205ENST00000425443 ESPL1Q14674 2120 aa11.18□□□□□ -0.62
COL12A1-205ENST00000425443 IGKV1-12A0A0C4DH73 117 aa11.18□□□□□ -0.62
COL12A1-205ENST00000425443 TAAR5O14804 337 aa11.18□□□□□ -0.62
COL12A1-205ENST00000425443 PHF1O43189 567 aaPredicted RBP11.18□□□□□ -0.62
COL12A1-205ENST00000425443 IGKV1D-12P01611 117 aa11.18□□□□□ -0.62
COL12A1-205ENST00000425443 CTSDP07339 412 aaPredicted RBP11.18□□□□□ -0.62
COL12A1-205ENST00000425443 DVL1P1P54792 670 aaPredicted RBP11.18□□□□□ -0.62
COL12A1-205ENST00000425443 OR10AD1Q8NGE0 317 aa11.18□□□□□ -0.62
COL12A1-205ENST00000425443 SNHG12Q9BXW3 62 aa11.18□□□□□ -0.62
COL12A1-205ENST00000425443 ZNF391Q9UJN7 358 aa11.18□□□□□ -0.62
COL12A1-205ENST00000425443 RCL1Q9Y2P8 373 aaKnown RBP11.18□□□□□ -0.62
COL12A1-205ENST00000425443 BOD1L1Q8NFC6 3051 aa11.18□□□□□ -0.62
COL12A1-205ENST00000425443 ECI1P42126 302 aa11.18□□□□□ -0.62
COL12A1-205ENST00000425443 FUT6P51993 359 aa11.18□□□□□ -0.62
COL12A1-205ENST00000425443 FAM3AP98173 230 aa11.18□□□□□ -0.62
COL12A1-205ENST00000425443 MALLQ13021 153 aa11.18□□□□□ -0.62
COL12A1-205ENST00000425443 TMEM187Q14656 261 aa11.18□□□□□ -0.62
COL12A1-205ENST00000425443 AWAT1Q58HT5 328 aa11.18□□□□□ -0.62
COL12A1-205ENST00000425443 NSUN5P2Q63ZY6 315 aa11.18□□□□□ -0.62
COL12A1-205ENST00000425443 EXTL1Q92935 676 aa11.18□□□□□ -0.62
COL12A1-205ENST00000425443 ADGRG7Q96K78 797 aa11.18□□□□□ -0.62
COL12A1-205ENST00000425443 SIGLEC12Q96PQ1 595 aa11.18□□□□□ -0.62
COL12A1-205ENST00000425443 VPS25Q9BRG1 176 aa11.18□□□□□ -0.62
COL12A1-205ENST00000425443 GAL3ST2Q9H3Q3 398 aa11.18□□□□□ -0.62
COL12A1-205ENST00000425443 RGCCQ9H4X1 137 aa11.18□□□□□ -0.62
COL12A1-205ENST00000425443 RNF122Q9H9V4 155 aa11.18□□□□□ -0.62
COL12A1-205ENST00000425443 PARPBPQ9NWS1 579 aa11.18□□□□□ -0.62
COL12A1-205ENST00000425443 FOXJ2Q9P0K8 574 aa11.18□□□□□ -0.62
COL12A1-205ENST00000425443 CACNA1DQ01668 2161 aa11.18□□□□□ -0.62
COL12A1-205ENST00000425443 CFAP47Q6ZTR5 3102 aa11.18□□□□□ -0.62
COL12A1-205ENST00000425443 ZNF816-ZNF321PA0A0X1KG74 233 aa11.18□□□□□ -0.62
COL12A1-205ENST00000425443 CELA3AP09093 270 aa11.18□□□□□ -0.62
COL12A1-205ENST00000425443 SNCAP37840 140 aa11.18□□□□□ -0.62
COL12A1-205ENST00000425443 NPBWR2P48146 333 aa11.18□□□□□ -0.62
COL12A1-205ENST00000425443 ARF1P84077 181 aaKnown RBP11.18□□□□□ -0.62
COL12A1-205ENST00000425443 MCEMP1Q8IX19 187 aa11.18□□□□□ -0.62
COL12A1-205ENST00000425443 OR2M7Q8NG81 312 aa11.18□□□□□ -0.62
COL12A1-205ENST00000425443 PSMF1Q92530 271 aa11.18□□□□□ -0.62
COL12A1-205ENST00000425443 EIF5A2Q9GZV4 153 aaKnown RBP11.18□□□□□ -0.62
COL12A1-205ENST00000425443 DECR2Q9NUI1 292 aa11.18□□□□□ -0.62
COL12A1-205ENST00000425443 GAR1Q9NY12 217 aaKnown RBP11.18□□□□□ -0.62
COL12A1-205ENST00000425443 KIAA2026Q5HYC2 2103 aa11.17□□□□□ -0.62
COL12A1-205ENST00000425443 A0A1W2PPH5 198 aa11.17□□□□□ -0.62
COL12A1-205ENST00000425443 C9orf172C9J069 976 aa11.17□□□□□ -0.62
COL12A1-205ENST00000425443 SIAH2O43255 324 aa11.17□□□□□ -0.62
COL12A1-205ENST00000425443 IGHV2-5P01817 119 aa11.17□□□□□ -0.62
COL12A1-205ENST00000425443 SLC25A26Q70HW3 274 aa11.17□□□□□ -0.62
COL12A1-205ENST00000425443 SMIM15Q7Z3B0 74 aa11.17□□□□□ -0.62
COL12A1-205ENST00000425443 TUSC5Q8IXB3 177 aa11.17□□□□□ -0.62
COL12A1-205ENST00000425443 TNFRSF14Q92956 283 aa11.17□□□□□ -0.62
COL12A1-205ENST00000425443 NTNG2Q96CW9 530 aa11.17□□□□□ -0.62
COL12A1-205ENST00000425443 SLC7A10Q9NS82 523 aa11.17□□□□□ -0.62
COL12A1-205ENST00000425443 A0A1W2PPQ1 181 aa11.17□□□□□ -0.62
COL12A1-205ENST00000425443 LNP1A1A4G5 178 aa11.17□□□□□ -0.62
COL12A1-205ENST00000425443 ZNF587BE7ETH6 402 aa11.17□□□□□ -0.62
COL12A1-205ENST00000425443 MAGEA5P43359 124 aa11.17□□□□□ -0.62
COL12A1-205ENST00000425443 GFRA1P56159 465 aa11.17□□□□□ -0.62
COL12A1-205ENST00000425443 SOX8P57073 446 aa11.17□□□□□ -0.62
COL12A1-205ENST00000425443 DAZAP2Q15038 168 aaPredicted RBP11.17□□□□□ -0.62
COL12A1-205ENST00000425443 OR1C1Q15619 314 aa11.17□□□□□ -0.62
COL12A1-205ENST00000425443 VASH2Q86V25 355 aa11.17□□□□□ -0.62
COL12A1-205ENST00000425443 EGLN1Q9GZT9 426 aa11.17□□□□□ -0.62
COL12A1-205ENST00000425443 MAGT1Q9H0U3 335 aa11.17□□□□□ -0.62
COL12A1-205ENST00000425443 IGHV3-64DA0A0J9YX35 117 aa11.16□□□□□ -0.62
COL12A1-205ENST00000425443 C5orf49A4QMS7 147 aa11.16□□□□□ -0.62
COL12A1-205ENST00000425443 JTBO76095 146 aa11.16□□□□□ -0.62
COL12A1-205ENST00000425443 HLA-HP01893 362 aa11.16□□□□□ -0.62
COL12A1-205ENST00000425443 GAPDHP04406 335 aaKnown RBP11.16□□□□□ -0.62
COL12A1-205ENST00000425443 NDUFA6P56556 154 aa11.16□□□□□ -0.62
COL12A1-205ENST00000425443 CALHM1Q8IU99 346 aa11.16□□□□□ -0.62
COL12A1-205ENST00000425443 ARV1Q9H2C2 271 aa11.16□□□□□ -0.62
COL12A1-205ENST00000425443 SLC2A9Q9NRM0 540 aa11.16□□□□□ -0.62
COL12A1-205ENST00000425443 hCG_38984A0A1B0GV85 526 aa11.16□□□□□ -0.62
COL12A1-205ENST00000425443 C7orf77A4D0Y5 90 aa11.16□□□□□ -0.62
COL12A1-205ENST00000425443 TSPAN15O95858 294 aa11.16□□□□□ -0.62
COL12A1-205ENST00000425443 GLP1RP43220 463 aa11.16□□□□□ -0.62
COL12A1-205ENST00000425443 EIF5AL1Q6IS14 154 aaKnown RBP11.16□□□□□ -0.62
COL12A1-205ENST00000425443 FBXW12Q6X9E4 464 aa11.16□□□□□ -0.62
COL12A1-205ENST00000425443 Q6ZSR3 168 aa11.16□□□□□ -0.62
COL12A1-205ENST00000425443 MRPL21Q7Z2W9 205 aaKnown RBP11.16□□□□□ -0.62
COL12A1-205ENST00000425443 NUDT11Q96G61 164 aa11.16□□□□□ -0.62
COL12A1-205ENST00000425443 ABHD14AQ9BUJ0 271 aa11.16□□□□□ -0.62
COL12A1-205ENST00000425443 ELOVL1Q9BW60 279 aa11.16□□□□□ -0.62
COL12A1-205ENST00000425443 DDA1Q9BW61 102 aa11.16□□□□□ -0.62
COL12A1-205ENST00000425443 ZNF286AQ9HBT8 521 aa11.16□□□□□ -0.62
COL12A1-205ENST00000425443 SEPSECSQ9HD40 501 aaKnown RBP11.16□□□□□ -0.62
COL12A1-205ENST00000425443 SMCO4Q9NRQ5 59 aa11.16□□□□□ -0.62
COL12A1-205ENST00000425443 EP300Q09472 2414 aaPredicted RBP11.16□□□□□ -0.62
COL12A1-205ENST00000425443 TNFSF12O43508 249 aa11.15□□□□□ -0.62
COL12A1-205ENST00000425443 FOLR2P14207 255 aa11.15□□□□□ -0.62
COL12A1-205ENST00000425443 ODF1Q14990 250 aa11.15□□□□□ -0.62
COL12A1-205ENST00000425443 IGFBP7Q16270 282 aa11.15□□□□□ -0.62
COL12A1-205ENST00000425443 FAM24BQ8N5W8 94 aa11.15□□□□□ -0.62
COL12A1-205ENST00000425443 ZNF611Q8N823 705 aa11.15□□□□□ -0.62
COL12A1-205ENST00000425443 NAA60Q9H7X0 242 aa11.15□□□□□ -0.62
COL12A1-205ENST00000425443 IL36RNQ9UBH0 155 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms