RNA–Protein interactions for RNA: ENST00000421263.1

VARS2-202, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 460 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-202ENST00000421263 A0A1W2PPE3 182 aa14.93□□□□□ -0.02
VARS2-202ENST00000421263 ORC5O43913 435 aa14.93□□□□□ -0.02
VARS2-202ENST00000421263 ZNF780AO75290 641 aaPredicted RBP14.93□□□□□ -0.02
VARS2-202ENST00000421263 CLIC3O95833 236 aa14.93□□□□□ -0.02
VARS2-202ENST00000421263 LALBAP00709 142 aa14.93□□□□□ -0.02
VARS2-202ENST00000421263 IGKV1D-33P01593 117 aa14.93□□□□□ -0.02
VARS2-202ENST00000421263 IGKV1-33P01594 117 aa14.93□□□□□ -0.02
VARS2-202ENST00000421263 CSTBP04080 98 aaKnown RBP14.93□□□□□ -0.02
VARS2-202ENST00000421263 GAPDHP04406 335 aaKnown RBP14.93□□□□□ -0.02
VARS2-202ENST00000421263 BDKRB2P30411 391 aa14.93□□□□□ -0.02
VARS2-202ENST00000421263 THBS3P49746 956 aa14.93□□□□□ -0.02
VARS2-202ENST00000421263 RPL23AP62750 156 aaKnown RBP14.93□□□□□ -0.02
VARS2-202ENST00000421263 PPP3R1P63098 170 aa14.93□□□□□ -0.02
VARS2-202ENST00000421263 KHDC1LQ5JSQ8 128 aa14.93□□□□□ -0.02
VARS2-202ENST00000421263 DMKNQ6E0U4 476 aaPredicted RBP14.93□□□□□ -0.02
VARS2-202ENST00000421263 MRPL41Q8IXM3 137 aaKnown RBP14.93□□□□□ -0.02
VARS2-202ENST00000421263 ZNF555Q8NEP9 628 aa14.93□□□□□ -0.02
VARS2-202ENST00000421263 OR10X1Q8NGY0 326 aa14.93□□□□□ -0.02
VARS2-202ENST00000421263 ST6GALNAC6Q969X2 333 aa14.93□□□□□ -0.02
VARS2-202ENST00000421263 ORAI1Q96D31 301 aa14.93□□□□□ -0.02
VARS2-202ENST00000421263 PAK1IP1Q9NWT1 392 aaPredicted RBP14.93□□□□□ -0.02
VARS2-202ENST00000421263 SMPD3Q9NY59 655 aaPredicted RBP14.93□□□□□ -0.02
VARS2-202ENST00000421263 DIMT1Q9UNQ2 313 aaKnown RBP14.93□□□□□ -0.02
VARS2-202ENST00000421263 IGHV1-3A0A0C4DH29 117 aa14.92□□□□□ -0.02
VARS2-202ENST00000421263 TMEM30CPA0ZSE6 113 aa14.92□□□□□ -0.02
VARS2-202ENST00000421263 IRGMA1A4Y4 181 aa14.92□□□□□ -0.02
VARS2-202ENST00000421263 HSD17B6O14756 317 aa14.92□□□□□ -0.02
VARS2-202ENST00000421263 MT-ND4P03905 459 aa14.92□□□□□ -0.02
VARS2-202ENST00000421263 SLC6A1P30531 599 aa14.92□□□□□ -0.02
VARS2-202ENST00000421263 RPS11P62280 158 aaKnown RBP eCLIP14.92□□□□□ -0.02
VARS2-202ENST00000421263 ZNF497Q6ZNH5 498 aa14.92□□□□□ -0.02
VARS2-202ENST00000421263 COMMD1Q8N668 190 aa14.92□□□□□ -0.02
VARS2-202ENST00000421263 Q8N6K4 173 aa14.92□□□□□ -0.02
VARS2-202ENST00000421263 ZNF485Q8NCK3 441 aa14.92□□□□□ -0.02
VARS2-202ENST00000421263 GHSRQ92847 366 aa14.92□□□□□ -0.02
VARS2-202ENST00000421263 ARL11Q969Q4 196 aa14.92□□□□□ -0.02
VARS2-202ENST00000421263 EAF1Q96JC9 268 aaPredicted RBP14.92□□□□□ -0.02
VARS2-202ENST00000421263 COL7A1Q02388 2944 aa14.92□□□□□ -0.02
VARS2-202ENST00000421263 A0A1W2PP11 408 aa14.91□□□□□ -0.02
VARS2-202ENST00000421263 WI2-2373I1.2A0A1W2PRP0 233 aa14.91□□□□□ -0.02
VARS2-202ENST00000421263 LINC01548A6NM66 108 aa14.91□□□□□ -0.02
VARS2-202ENST00000421263 SERPINA2P20848 420 aa14.91□□□□□ -0.02
VARS2-202ENST00000421263 RIPK1Q13546 671 aa14.91□□□□□ -0.02
VARS2-202ENST00000421263 Q3ZCU0 254 aa14.91□□□□□ -0.02
VARS2-202ENST00000421263 OR2W3Q7Z3T1 314 aa14.91□□□□□ -0.02
VARS2-202ENST00000421263 IZUMO1Q8IYV9 350 aa14.91□□□□□ -0.02
VARS2-202ENST00000421263 TMEM104Q8NE00 496 aa14.91□□□□□ -0.02
VARS2-202ENST00000421263 OR51D1Q8NGF3 324 aa14.91□□□□□ -0.02
VARS2-202ENST00000421263 S100A13Q99584 98 aa14.91□□□□□ -0.02
VARS2-202ENST00000421263 ZNF184Q99676 751 aaPredicted RBP14.91□□□□□ -0.02
VARS2-202ENST00000421263 GFOD1Q9NXC2 390 aa14.91□□□□□ -0.02
VARS2-202ENST00000421263 CLEC2DQ9UHP7 191 aa14.91□□□□□ -0.02
VARS2-202ENST00000421263 LINC00527Q9UJ94 153 aa14.91□□□□□ -0.02
VARS2-202ENST00000421263 EXOSC1Q9Y3B2 195 aaKnown RBP14.91□□□□□ -0.02
VARS2-202ENST00000421263 SERPINE3A8MV23 424 aa14.9□□□□□ -0.02
VARS2-202ENST00000421263 CCRL2O00421 344 aa14.9□□□□□ -0.02
VARS2-202ENST00000421263 GTF2F2P13984 249 aa14.9□□□□□ -0.02
VARS2-202ENST00000421263 MYCNOSP40205 109 aa14.9□□□□□ -0.02
VARS2-202ENST00000421263 GPR176Q14439 515 aa14.9□□□□□ -0.02
VARS2-202ENST00000421263 Q499Y3 187 aa14.9□□□□□ -0.02
VARS2-202ENST00000421263 ATAD3CQ5T2N8 411 aa14.9□□□□□ -0.02
VARS2-202ENST00000421263 FAM53AQ6NSI3 398 aaPredicted RBP14.9□□□□□ -0.02
VARS2-202ENST00000421263 C18orf65Q6ZTR6 163 aa14.9□□□□□ -0.02
VARS2-202ENST00000421263 SLC35E3Q7Z769 313 aa14.9□□□□□ -0.02
VARS2-202ENST00000421263 MOB3BQ86TA1 216 aa14.9□□□□□ -0.02
VARS2-202ENST00000421263 TGIF2LXQ8IUE1 241 aa14.9□□□□□ -0.02
VARS2-202ENST00000421263 STPG2Q8N412 459 aa14.9□□□□□ -0.02
VARS2-202ENST00000421263 OR13C5Q8NGS8 318 aa14.9□□□□□ -0.02
VARS2-202ENST00000421263 CCDC107Q8WV48 283 aa14.9□□□□□ -0.02
VARS2-202ENST00000421263 PGLYRP3Q96LB9 341 aa14.9□□□□□ -0.02
VARS2-202ENST00000421263 P2RX4Q99571 388 aa14.9□□□□□ -0.02
VARS2-202ENST00000421263 PLSCR3Q9NRY6 295 aa14.9□□□□□ -0.02
VARS2-202ENST00000421263 RCC2Q9P258 522 aaKnown RBP14.9□□□□□ -0.02
VARS2-202ENST00000421263 TRAV8-7A0A075B6U6 113 aa14.89□□□□□ -0.03
VARS2-202ENST00000421263 MAGEA13PA6NCF6 341 aa14.89□□□□□ -0.03
VARS2-202ENST00000421263 SDCBPO00560 298 aaPredicted RBP14.89□□□□□ -0.03
VARS2-202ENST00000421263 FSTP19883 344 aa14.89□□□□□ -0.03
VARS2-202ENST00000421263 CD1BP29016 333 aa14.89□□□□□ -0.03
VARS2-202ENST00000421263 REG1BP48304 166 aa14.89□□□□□ -0.03
VARS2-202ENST00000421263 SLC22A6Q4U2R8 563 aa14.89□□□□□ -0.03
VARS2-202ENST00000421263 YIF1BQ5BJH7 314 aa14.89□□□□□ -0.03
VARS2-202ENST00000421263 LYPD6Q86Y78 171 aa14.89□□□□□ -0.03
VARS2-202ENST00000421263 FOXRED2Q8IWF2 684 aa14.89□□□□□ -0.03
VARS2-202ENST00000421263 GAPTQ8N292 157 aa14.89□□□□□ -0.03
VARS2-202ENST00000421263 Q8N9W7 124 aa14.89□□□□□ -0.03
VARS2-202ENST00000421263 ZNF439Q8NDP4 499 aa14.89□□□□□ -0.03
VARS2-202ENST00000421263 OR2T10Q8NGZ9 312 aa14.89□□□□□ -0.03
VARS2-202ENST00000421263 MRPS24Q96EL2 167 aaKnown RBP14.89□□□□□ -0.03
VARS2-202ENST00000421263 TMEM80Q96HE8 168 aa14.89□□□□□ -0.03
VARS2-202ENST00000421263 GPR61Q9BZJ8 451 aa14.89□□□□□ -0.03
VARS2-202ENST00000421263 ABCG5Q9H222 651 aa14.89□□□□□ -0.03
VARS2-202ENST00000421263 LIN7CQ9NUP9 197 aaKnown RBP14.89□□□□□ -0.03
VARS2-202ENST00000421263 TRBV5-7A0A0A0MS05 114 aa14.88□□□□□ -0.03
VARS2-202ENST00000421263 IGHV3-72A0A0B4J1Y9 119 aa14.88□□□□□ -0.03
VARS2-202ENST00000421263 BAG2O95816 211 aa14.88□□□□□ -0.03
VARS2-202ENST00000421263 MYL12AP19105 171 aa14.88□□□□□ -0.03
VARS2-202ENST00000421263 HOXD3P31249 432 aaPredicted RBP14.88□□□□□ -0.03
VARS2-202ENST00000421263 ZNF137PP52743 207 aa14.88□□□□□ -0.03
VARS2-202ENST00000421263 SLC35B1P78383 322 aa14.88□□□□□ -0.03
VARS2-202ENST00000421263 C8orf86Q6ZUL3 223 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms