RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 RFESDQ8TAC1 157 aa16.55■□□□□ 0.24
PKNOX1-202ENST00000418336 ZNF596Q8TC21 504 aa16.55■□□□□ 0.24
PKNOX1-202ENST00000418336 LEAP2Q969E1 77 aa16.55■□□□□ 0.24
PKNOX1-202ENST00000418336 KCNK15Q9H427 330 aa16.55■□□□□ 0.24
PKNOX1-202ENST00000418336 ACOT13Q9NPJ3 140 aa16.55■□□□□ 0.24
PKNOX1-202ENST00000418336 PCDHB16Q9NRJ7 776 aa16.55■□□□□ 0.24
PKNOX1-202ENST00000418336 TMEM30CPA0ZSE6 113 aa16.54■□□□□ 0.24
PKNOX1-202ENST00000418336 LOXL3P58215 753 aa16.54■□□□□ 0.24
PKNOX1-202ENST00000418336 UNC119Q13432 240 aa16.54■□□□□ 0.24
PKNOX1-202ENST00000418336 HSD17B12Q53GQ0 312 aa16.54■□□□□ 0.24
PKNOX1-202ENST00000418336 ATAD3CQ5T2N8 411 aa16.54■□□□□ 0.24
PKNOX1-202ENST00000418336 TPTE2P1Q5T6R2 138 aa16.54■□□□□ 0.24
PKNOX1-202ENST00000418336 NDNFQ8TB73 568 aa16.54■□□□□ 0.24
PKNOX1-202ENST00000418336 WIPF2Q8TF74 440 aaPredicted RBP16.54■□□□□ 0.24
PKNOX1-202ENST00000418336 SELENOIQ9C0D9 397 aa16.54■□□□□ 0.24
PKNOX1-202ENST00000418336 CCDC90BQ9GZT6 254 aa16.54■□□□□ 0.24
PKNOX1-202ENST00000418336 TCF7L1Q9HCS4 588 aa16.54■□□□□ 0.24
PKNOX1-202ENST00000418336 GHRLQ9UBU3 117 aa16.54■□□□□ 0.24
PKNOX1-202ENST00000418336 PSG11Q9UQ72 335 aa16.54■□□□□ 0.24
PKNOX1-202ENST00000418336 SHISA3A0PJX4 238 aa16.53■□□□□ 0.24
PKNOX1-202ENST00000418336 J3QR06 171 aa16.53■□□□□ 0.24
PKNOX1-202ENST00000418336 HSMCR30P0CW71 290 aa16.53■□□□□ 0.24
PKNOX1-202ENST00000418336 EMX1Q04741 257 aaPredicted RBP16.53■□□□□ 0.24
PKNOX1-202ENST00000418336 DIAPH2-AS1Q14236 149 aa16.53■□□□□ 0.24
PKNOX1-202ENST00000418336 OR10K2Q6IF99 312 aa16.53■□□□□ 0.24
PKNOX1-202ENST00000418336 RAB12Q6IQ22 244 aa16.53■□□□□ 0.24
PKNOX1-202ENST00000418336 Q6ZPA2 131 aa16.53■□□□□ 0.24
PKNOX1-202ENST00000418336 Q6ZS46 218 aa16.53■□□□□ 0.24
PKNOX1-202ENST00000418336 OR9G1Q8NH87 305 aa16.53■□□□□ 0.24
PKNOX1-202ENST00000418336 MMP28Q9H239 520 aa16.53■□□□□ 0.24
PKNOX1-202ENST00000418336 WNK1Q9H4A3 2382 aa16.53■□□□□ 0.24
PKNOX1-202ENST00000418336 TMEM14DPA8MWL7 114 aa16.52■□□□□ 0.24
PKNOX1-202ENST00000418336 LEUTXA8MZ59 168 aa16.52■□□□□ 0.24
PKNOX1-202ENST00000418336 CRTAPO75718 401 aaPredicted RBP16.52■□□□□ 0.24
PKNOX1-202ENST00000418336 IGHV3-7P01780 117 aa16.52■□□□□ 0.24
PKNOX1-202ENST00000418336 GZMHP20718 246 aa16.52■□□□□ 0.24
PKNOX1-202ENST00000418336 NFYBP25208 207 aa16.52■□□□□ 0.24
PKNOX1-202ENST00000418336 GABRA5P31644 462 aa16.52■□□□□ 0.24
PKNOX1-202ENST00000418336 GABARAPL2P60520 117 aa16.52■□□□□ 0.24
PKNOX1-202ENST00000418336 CD200R1LQ6Q8B3 271 aa16.52■□□□□ 0.24
PKNOX1-202ENST00000418336 ZNF367Q7RTV3 350 aa16.52■□□□□ 0.24
PKNOX1-202ENST00000418336 FAM46BQ96A09 425 aa16.52■□□□□ 0.24
PKNOX1-202ENST00000418336 TM2D1Q9BX74 207 aa16.52■□□□□ 0.24
PKNOX1-202ENST00000418336 SPACA1Q9HBV2 294 aa16.52■□□□□ 0.24
PKNOX1-202ENST00000418336 RAB18Q9NP72 206 aa16.52■□□□□ 0.24
PKNOX1-202ENST00000418336 SERTAD4Q9NUC0 356 aa16.52■□□□□ 0.24
PKNOX1-202ENST00000418336 A0A0A6YYD4 124 aa16.51■□□□□ 0.23
PKNOX1-202ENST00000418336 FAM90A9PA6NNJ1 464 aa16.51■□□□□ 0.23
PKNOX1-202ENST00000418336 F2RL2O00254 374 aa16.51■□□□□ 0.23
PKNOX1-202ENST00000418336 ORC5O43913 435 aa16.51■□□□□ 0.23
PKNOX1-202ENST00000418336 GLAP06280 429 aa16.51■□□□□ 0.23
PKNOX1-202ENST00000418336 UBBP0CG47 229 aa16.51■□□□□ 0.23
PKNOX1-202ENST00000418336 CD24P25063 80 aa16.51■□□□□ 0.23
PKNOX1-202ENST00000418336 RPS27AP62979 156 aaKnown RBP16.51■□□□□ 0.23
PKNOX1-202ENST00000418336 HABP2Q14520 560 aaPredicted RBP16.51■□□□□ 0.23
PKNOX1-202ENST00000418336 TRAM1Q15629 374 aa16.51■□□□□ 0.23
PKNOX1-202ENST00000418336 GLT8D1Q68CQ7 371 aa16.51■□□□□ 0.23
PKNOX1-202ENST00000418336 SLC16A12Q6ZSM3 486 aa16.51■□□□□ 0.23
PKNOX1-202ENST00000418336 UBALD1Q8TB05 177 aa16.51■□□□□ 0.23
PKNOX1-202ENST00000418336 CCDC107Q8WV48 283 aa16.51■□□□□ 0.23
PKNOX1-202ENST00000418336 NICN1Q9BSH3 213 aa16.51■□□□□ 0.23
PKNOX1-202ENST00000418336 MBNL3Q9NUK0 354 aaKnown RBP16.51■□□□□ 0.23
PKNOX1-202ENST00000418336 PEX16Q9Y5Y5 336 aa16.51■□□□□ 0.23
PKNOX1-202ENST00000418336 A0A1W2PPI3 338 aa16.5■□□□□ 0.23
PKNOX1-202ENST00000418336 FOXI3A8MTJ6 420 aaPredicted RBP16.5■□□□□ 0.23
PKNOX1-202ENST00000418336 C12orf77C9JDV5 145 aa16.5■□□□□ 0.23
PKNOX1-202ENST00000418336 AIPO00170 330 aa16.5■□□□□ 0.23
PKNOX1-202ENST00000418336 FUT3P21217 361 aa16.5■□□□□ 0.23
PKNOX1-202ENST00000418336 PSMA1P25786 263 aaKnown RBP16.5■□□□□ 0.23
PKNOX1-202ENST00000418336 CHATP28329 748 aa16.5■□□□□ 0.23
PKNOX1-202ENST00000418336 HTR2CP28335 458 aa16.5■□□□□ 0.23
PKNOX1-202ENST00000418336 PRRX1P54821 245 aa16.5■□□□□ 0.23
PKNOX1-202ENST00000418336 BLCAPP62952 87 aa16.5■□□□□ 0.23
PKNOX1-202ENST00000418336 LTC4SQ16873 150 aa16.5■□□□□ 0.23
PKNOX1-202ENST00000418336 C5orf24Q7Z6I8 188 aa16.5■□□□□ 0.23
PKNOX1-202ENST00000418336 OR52M1Q8NGK5 317 aa16.5■□□□□ 0.23
PKNOX1-202ENST00000418336 OR4C13Q8NGP0 309 aa16.5■□□□□ 0.23
PKNOX1-202ENST00000418336 CFHR4Q92496 578 aa16.5■□□□□ 0.23
PKNOX1-202ENST00000418336 NPFFR1Q9GZQ6 430 aa16.5■□□□□ 0.23
PKNOX1-202ENST00000418336 ABCB10Q9NRK6 738 aa16.5■□□□□ 0.23
PKNOX1-202ENST00000418336 NDUFB11Q9NX14 153 aa16.5■□□□□ 0.23
PKNOX1-202ENST00000418336 ETAA1Q9NY74 926 aa16.5■□□□□ 0.23
PKNOX1-202ENST00000418336 MCRIP1C9JLW8 97 aa16.49■□□□□ 0.23
PKNOX1-202ENST00000418336 SLC17A2O00624 439 aa16.49■□□□□ 0.23
PKNOX1-202ENST00000418336 MRPS14O60783 128 aaKnown RBP16.49■□□□□ 0.23
PKNOX1-202ENST00000418336 PDCD6O75340 191 aa16.49■□□□□ 0.23
PKNOX1-202ENST00000418336 MPIG6BO95866 241 aa16.49■□□□□ 0.23
PKNOX1-202ENST00000418336 AMY1AP04745 511 aa16.49■□□□□ 0.23
PKNOX1-202ENST00000418336 AMY2AP04746 511 aa16.49■□□□□ 0.23
PKNOX1-202ENST00000418336 RCC1P18754 421 aaPredicted RBP16.49■□□□□ 0.23
PKNOX1-202ENST00000418336 SYT6Q5T7P8 510 aaPredicted RBP16.49■□□□□ 0.23
PKNOX1-202ENST00000418336 UBE2UQ5VVX9 321 aa16.49■□□□□ 0.23
PKNOX1-202ENST00000418336 HIST2H2BDQ6DRA6 164 aa16.49■□□□□ 0.23
PKNOX1-202ENST00000418336 SPARTQ8N0X7 666 aa16.49■□□□□ 0.23
PKNOX1-202ENST00000418336 C8orf31Q8N9H6 132 aa16.49■□□□□ 0.23
PKNOX1-202ENST00000418336 ZNF439Q8NDP4 499 aa16.49■□□□□ 0.23
PKNOX1-202ENST00000418336 OR6M1Q8NGM8 313 aa16.49■□□□□ 0.23
PKNOX1-202ENST00000418336 OR4K15Q8NH41 348 aa16.49■□□□□ 0.23
PKNOX1-202ENST00000418336 MRPL30Q8TCC3 161 aaKnown RBP16.49■□□□□ 0.23
PKNOX1-202ENST00000418336 ARL11Q969Q4 196 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms