RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 ALG14Q96F25 216 aa9.84□□□□□ -0.83
PTCH1-205ENST00000418258 NPAS1Q99742 590 aa9.84□□□□□ -0.83
PTCH1-205ENST00000418258 TMEM38BQ9NVV0 291 aa9.84□□□□□ -0.83
PTCH1-205ENST00000418258 CIDEAO60543 219 aa9.84□□□□□ -0.83
PTCH1-205ENST00000418258 CRISP2P16562 243 aa9.84□□□□□ -0.83
PTCH1-205ENST00000418258 ZNF658BQ4V348 819 aaPredicted RBP9.84□□□□□ -0.83
PTCH1-205ENST00000418258 TM4SF20Q53R12 229 aa9.84□□□□□ -0.83
PTCH1-205ENST00000418258 HMGCLL1Q8TB92 370 aa9.84□□□□□ -0.83
PTCH1-205ENST00000418258 C10orf35Q96D05 121 aa9.84□□□□□ -0.83
PTCH1-205ENST00000418258 GHITMQ9H3K2 345 aa9.84□□□□□ -0.83
PTCH1-205ENST00000418258 ZMAT5Q9UDW3 170 aaKnown RBP9.84□□□□□ -0.83
PTCH1-205ENST00000418258 WSB1Q9Y6I7 421 aa9.84□□□□□ -0.83
PTCH1-205ENST00000418258 LRP5O75197 1615 aa9.84□□□□□ -0.83
PTCH1-205ENST00000418258 A0A1W2PQD3 144 aa9.84□□□□□ -0.83
PTCH1-205ENST00000418258 RAB32Q13637 225 aa9.84□□□□□ -0.83
PTCH1-205ENST00000418258 CLEC9AQ6UXN8 241 aa9.84□□□□□ -0.83
PTCH1-205ENST00000418258 C16orf92Q96LL3 132 aa9.84□□□□□ -0.83
PTCH1-205ENST00000418258 NRTNQ99748 197 aa9.84□□□□□ -0.83
PTCH1-205ENST00000418258 IGSF23A1L1A6 192 aa9.84□□□□□ -0.83
PTCH1-205ENST00000418258 NDUFB6O95139 128 aa9.84□□□□□ -0.83
PTCH1-205ENST00000418258 POLR2GP62487 172 aaKnown RBP eCLIP9.84□□□□□ -0.83
PTCH1-205ENST00000418258 ISXQ2M1V0 245 aa9.84□□□□□ -0.83
PTCH1-205ENST00000418258 KHDC3LQ587J8 217 aa9.84□□□□□ -0.83
PTCH1-205ENST00000418258 RNF165Q6ZSG1 346 aa9.84□□□□□ -0.83
PTCH1-205ENST00000418258 SLC2A9Q9NRM0 540 aa9.84□□□□□ -0.83
PTCH1-205ENST00000418258 PRNDQ9UKY0 176 aa9.84□□□□□ -0.83
PTCH1-205ENST00000418258 TRPM7Q96QT4 1865 aa9.84□□□□□ -0.83
PTCH1-205ENST00000418258 MFSD2BA6NFX1 497 aa9.84□□□□□ -0.83
PTCH1-205ENST00000418258 IQCJQ1A5X6 159 aa9.84□□□□□ -0.83
PTCH1-205ENST00000418258 OPN3Q9H1Y3 402 aaPredicted RBP9.84□□□□□ -0.83
PTCH1-205ENST00000418258 SMAD7O15105 426 aaKnown RBP9.84□□□□□ -0.84
PTCH1-205ENST00000418258 TOMM20LQ6UXN7 152 aa9.84□□□□□ -0.84
PTCH1-205ENST00000418258 TET1Q8NFU7 2136 aa9.84□□□□□ -0.84
PTCH1-205ENST00000418258 MTFP1Q9UDX5 166 aa9.84□□□□□ -0.84
PTCH1-205ENST00000418258 SF3B6Q9Y3B4 125 aaKnown RBP9.84□□□□□ -0.84
PTCH1-205ENST00000418258 SBF1O95248 1867 aa9.83□□□□□ -0.84
PTCH1-205ENST00000418258 C5orf52A6NGY3 159 aa9.83□□□□□ -0.84
PTCH1-205ENST00000418258 CBY3A6NI87 242 aa9.83□□□□□ -0.84
PTCH1-205ENST00000418258 M0R2Z0 102 aa9.83□□□□□ -0.84
PTCH1-205ENST00000418258 SPINT1O43278 529 aa9.83□□□□□ -0.84
PTCH1-205ENST00000418258 HLA-GP17693 338 aa9.83□□□□□ -0.84
PTCH1-205ENST00000418258 SPANXN1Q5VSR9 72 aa9.83□□□□□ -0.84
PTCH1-205ENST00000418258 C1QL3Q5VWW1 255 aa9.83□□□□□ -0.84
PTCH1-205ENST00000418258 OR1L8Q8NGR8 309 aa9.83□□□□□ -0.84
PTCH1-205ENST00000418258 SNRNP40Q96DI7 357 aaKnown RBP9.83□□□□□ -0.84
PTCH1-205ENST00000418258 ZNF714Q96N38 554 aa9.83□□□□□ -0.84
PTCH1-205ENST00000418258 NUDT16L1Q9BRJ7 211 aaKnown RBP9.83□□□□□ -0.84
PTCH1-205ENST00000418258 MELTFP08582 738 aa9.83□□□□□ -0.84
PTCH1-205ENST00000418258 ACAA2P42765 397 aaKnown RBP9.83□□□□□ -0.84
PTCH1-205ENST00000418258 RIGQ13278 110 aa9.83□□□□□ -0.84
PTCH1-205ENST00000418258 PMS2P11Q13670 270 aa9.83□□□□□ -0.84
PTCH1-205ENST00000418258 SEC11CQ9BY50 192 aa9.83□□□□□ -0.84
PTCH1-205ENST00000418258 GSX1Q9H4S2 264 aaPredicted RBP9.83□□□□□ -0.84
PTCH1-205ENST00000418258 SPTA1P02549 2419 aa9.83□□□□□ -0.84
PTCH1-205ENST00000418258 KIAA2026Q5HYC2 2103 aa9.83□□□□□ -0.84
PTCH1-205ENST00000418258 K7N7A8 449 aa9.83□□□□□ -0.84
PTCH1-205ENST00000418258 ATP5J2P56134 94 aa9.83□□□□□ -0.84
PTCH1-205ENST00000418258 LYRM7Q5U5X0 104 aa9.83□□□□□ -0.84
PTCH1-205ENST00000418258 OIT3Q8WWZ8 545 aa9.83□□□□□ -0.84
PTCH1-205ENST00000418258 OR10C1Q96KK4 312 aa9.83□□□□□ -0.84
PTCH1-205ENST00000418258 MIEN1Q9BRT3 115 aa9.83□□□□□ -0.84
PTCH1-205ENST00000418258 CEP250Q9BV73 2442 aa9.83□□□□□ -0.84
PTCH1-205ENST00000418258 IGKV3D-15A0A087WSY6 115 aa9.83□□□□□ -0.84
PTCH1-205ENST00000418258 SYNGR1O43759 233 aa9.83□□□□□ -0.84
PTCH1-205ENST00000418258 IGKV3-15P01624 115 aa9.83□□□□□ -0.84
PTCH1-205ENST00000418258 SLC6A1P30531 599 aa9.83□□□□□ -0.84
PTCH1-205ENST00000418258 MYOZ3Q8TDC0 251 aa9.83□□□□□ -0.84
PTCH1-205ENST00000418258 EID2BQ96D98 161 aa9.83□□□□□ -0.84
PTCH1-205ENST00000418258 NAT2P11245 290 aa9.83□□□□□ -0.84
PTCH1-205ENST00000418258 PPP1CCP36873 323 aaKnown RBP9.83□□□□□ -0.84
PTCH1-205ENST00000418258 PRNTQ86SH4 94 aa9.83□□□□□ -0.84
PTCH1-205ENST00000418258 GAPTQ8N292 157 aa9.83□□□□□ -0.84
PTCH1-205ENST00000418258 METTL26Q96S19 204 aa9.83□□□□□ -0.84
PTCH1-205ENST00000418258 SLC35B3Q9H1N7 401 aa9.83□□□□□ -0.84
PTCH1-205ENST00000418258 CISD1Q9NZ45 108 aaKnown RBP9.83□□□□□ -0.84
PTCH1-205ENST00000418258 OR51B2Q9Y5P1 312 aa9.83□□□□□ -0.84
PTCH1-205ENST00000418258 ALPK2Q86TB3 2170 aa9.83□□□□□ -0.84
PTCH1-205ENST00000418258 CACNA1GO43497 2377 aa9.83□□□□□ -0.84
PTCH1-205ENST00000418258 CDC42EP2O14613 210 aa9.83□□□□□ -0.84
PTCH1-205ENST00000418258 MRGPRFQ96AM1 343 aa9.83□□□□□ -0.84
PTCH1-205ENST00000418258 MAP1LC3CQ9BXW4 147 aa9.83□□□□□ -0.84
PTCH1-205ENST00000418258 TAF1LQ8IZX4 1826 aa9.82□□□□□ -0.84
PTCH1-205ENST00000418258 RAB29O14966 203 aa9.82□□□□□ -0.84
PTCH1-205ENST00000418258 SMAGPQ0VAQ4 97 aa9.82□□□□□ -0.84
PTCH1-205ENST00000418258 TWIST1Q15672 202 aa9.82□□□□□ -0.84
PTCH1-205ENST00000418258 OR10AC1Q8NH08 325 aa9.82□□□□□ -0.84
PTCH1-205ENST00000418258 WDR34Q96EX3 536 aa9.82□□□□□ -0.84
PTCH1-205ENST00000418258 FLRT3Q9NZU0 649 aa9.82□□□□□ -0.84
PTCH1-205ENST00000418258 NKX2-8O15522 239 aa9.82□□□□□ -0.84
PTCH1-205ENST00000418258 HPXP02790 462 aa9.82□□□□□ -0.84
PTCH1-205ENST00000418258 WNT5AP41221 380 aa9.82□□□□□ -0.84
PTCH1-205ENST00000418258 CRYBB2P43320 205 aa9.82□□□□□ -0.84
PTCH1-205ENST00000418258 PMS2CLQ68D20 193 aa9.82□□□□□ -0.84
PTCH1-205ENST00000418258 LINC00596Q86U02 117 aa9.82□□□□□ -0.84
PTCH1-205ENST00000418258 OR5A2Q8NGI9 324 aa9.82□□□□□ -0.84
PTCH1-205ENST00000418258 TMEM140Q9NV12 185 aa9.82□□□□□ -0.84
PTCH1-205ENST00000418258 SDK2Q58EX2 2172 aa9.82□□□□□ -0.84
PTCH1-205ENST00000418258 CADP27708 2225 aa9.82□□□□□ -0.84
PTCH1-205ENST00000418258 ASPDHA6ND91 283 aa9.82□□□□□ -0.84
PTCH1-205ENST00000418258 TO15178 435 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms