RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 PGAM2P15259 253 aa14.17□□□□□ -0.14
CALD1-204ENST00000417172 FPR2P25090 351 aa14.17□□□□□ -0.14
CALD1-204ENST00000417172 KIR2DS4P43632 304 aa14.17□□□□□ -0.14
CALD1-204ENST00000417172 KIR2DS1Q14954 304 aa14.17□□□□□ -0.14
CALD1-204ENST00000417172 C2orf68Q2NKX9 166 aa14.17□□□□□ -0.14
CALD1-204ENST00000417172 FAM53AQ6NSI3 398 aaPredicted RBP14.17□□□□□ -0.14
CALD1-204ENST00000417172 MEX3BQ6ZN04 569 aaKnown RBP14.17□□□□□ -0.14
CALD1-204ENST00000417172 SLC25A42Q86VD7 318 aa14.17□□□□□ -0.14
CALD1-204ENST00000417172 FAM216BQ8N7L0 139 aa14.17□□□□□ -0.14
CALD1-204ENST00000417172 GAFA1Q96PS6 74 aa14.17□□□□□ -0.14
CALD1-204ENST00000417172 MBNL3Q9NUK0 354 aaKnown RBP14.17□□□□□ -0.14
CALD1-204ENST00000417172 LRRC30A6NM36 301 aa14.16□□□□□ -0.14
CALD1-204ENST00000417172 TRAPPC2P0DI81 140 aa14.16□□□□□ -0.14
CALD1-204ENST00000417172 TRAPPC2BP0DI82 140 aa14.16□□□□□ -0.14
CALD1-204ENST00000417172 SRSF1Q07955 248 aaKnown RBP eCLIP14.16□□□□□ -0.146e-8■■■■□ 19.9
CALD1-204ENST00000417172 DHRS2Q13268 280 aa14.16□□□□□ -0.14
CALD1-204ENST00000417172 SLC35E4Q6ICL7 350 aa14.16□□□□□ -0.14
CALD1-204ENST00000417172 C11orf71Q6IPW1 123 aa14.16□□□□□ -0.14
CALD1-204ENST00000417172 UXS1Q8NBZ7 420 aa14.16□□□□□ -0.14
CALD1-204ENST00000417172 MRGPRDQ8TDS7 321 aa14.16□□□□□ -0.14
CALD1-204ENST00000417172 TAF9BQ9HBM6 251 aa14.16□□□□□ -0.14
CALD1-204ENST00000417172 PRR13Q9NZ81 148 aa14.16□□□□□ -0.14
CALD1-204ENST00000417172 IGHV1-69-2A0A0G2JMI3 117 aa14.15□□□□□ -0.14
CALD1-204ENST00000417172 SMLR1H3BR10 107 aa14.15□□□□□ -0.14
CALD1-204ENST00000417172 HLA-AP01891 365 aaKnown RBP14.15□□□□□ -0.14
CALD1-204ENST00000417172 TEX36Q5VZQ5 186 aa14.15□□□□□ -0.14
CALD1-204ENST00000417172 OR13A1Q8NGR1 328 aa14.15□□□□□ -0.14
CALD1-204ENST00000417172 ALX4Q9H161 411 aaPredicted RBP14.15□□□□□ -0.14
CALD1-204ENST00000417172 UBTD1Q9HAC8 227 aa14.15□□□□□ -0.14
CALD1-204ENST00000417172 GPN1Q9HCN4 374 aaPredicted RBP14.15□□□□□ -0.14
CALD1-204ENST00000417172 CRYBG3Q68DQ2 2970 aa14.15□□□□□ -0.14
CALD1-204ENST00000417172 USF3Q68DE3 2245 aa14.15□□□□□ -0.14
CALD1-204ENST00000417172 K7N7A8 449 aa14.15□□□□□ -0.14
CALD1-204ENST00000417172 PPYP01298 95 aa14.15□□□□□ -0.14
CALD1-204ENST00000417172 TK1P04183 234 aa14.15□□□□□ -0.14
CALD1-204ENST00000417172 DANCRP0C864 163 aa14.15□□□□□ -0.14
CALD1-204ENST00000417172 VAMP1P23763 118 aa14.15□□□□□ -0.14
CALD1-204ENST00000417172 ZBTB25P24278 435 aa14.15□□□□□ -0.14
CALD1-204ENST00000417172 COL8A2P25067 703 aa14.15□□□□□ -0.14
CALD1-204ENST00000417172 SSTR5P35346 364 aa14.15□□□□□ -0.14
CALD1-204ENST00000417172 GLP1RP43220 463 aa14.15□□□□□ -0.14
CALD1-204ENST00000417172 NKX2-5P52952 324 aaPredicted RBP14.15□□□□□ -0.14
CALD1-204ENST00000417172 CD276Q5ZPR3 534 aa14.15□□□□□ -0.14
CALD1-204ENST00000417172 LIN54Q6MZP7 749 aa14.15□□□□□ -0.14
CALD1-204ENST00000417172 LDLRAD3Q86YD5 345 aa14.15□□□□□ -0.14
CALD1-204ENST00000417172 TMEM185AQ8NFB2 350 aa14.15□□□□□ -0.14
CALD1-204ENST00000417172 OR1L1Q8NH94 360 aa14.15□□□□□ -0.14
CALD1-204ENST00000417172 ZNF431Q8TF32 576 aaPredicted RBP14.15□□□□□ -0.14
CALD1-204ENST00000417172 MED30Q96HR3 178 aa14.15□□□□□ -0.14
CALD1-204ENST00000417172 SNX22Q96L94 193 aa14.15□□□□□ -0.14
CALD1-204ENST00000417172 CBLN4Q9NTU7 201 aa14.15□□□□□ -0.14
CALD1-204ENST00000417172 LAMP3Q9UQV4 416 aa14.15□□□□□ -0.14
CALD1-204ENST00000417172 IGKV1D-13A0A0B4J2D9 117 aa14.14□□□□□ -0.15
CALD1-204ENST00000417172 SNRPGP15A8MWD9 76 aa14.14□□□□□ -0.15
CALD1-204ENST00000417172 C12orf77C9JDV5 145 aa14.14□□□□□ -0.15
CALD1-204ENST00000417172 H7C1Q1 480 aa14.14□□□□□ -0.15
CALD1-204ENST00000417172 SULT1A3P0DMM9 295 aa14.14□□□□□ -0.15
CALD1-204ENST00000417172 SULT1A4P0DMN0 295 aa14.14□□□□□ -0.15
CALD1-204ENST00000417172 IGKV1-13P0DP09 117 aa14.14□□□□□ -0.15
CALD1-204ENST00000417172 PPOXP50336 477 aa14.14□□□□□ -0.15
CALD1-204ENST00000417172 EDDM3BP56851 147 aa14.14□□□□□ -0.15
CALD1-204ENST00000417172 HMGN3Q15651 99 aa14.14□□□□□ -0.15
CALD1-204ENST00000417172 MOB1BQ7L9L4 216 aa14.14□□□□□ -0.15
CALD1-204ENST00000417172 OR4A4PQ8NGN8 299 aa14.14□□□□□ -0.15
CALD1-204ENST00000417172 CASTOR1Q8WTX7 329 aa14.14□□□□□ -0.15
CALD1-204ENST00000417172 MOB3AQ96BX8 217 aa14.14□□□□□ -0.15
CALD1-204ENST00000417172 WDR89Q96FK6 387 aaPredicted RBP14.14□□□□□ -0.15
CALD1-204ENST00000417172 ARPC5LQ9BPX5 153 aa14.14□□□□□ -0.15
CALD1-204ENST00000417172 PARP12Q9H0J9 701 aaKnown RBP14.14□□□□□ -0.15
CALD1-204ENST00000417172 MYOZ1Q9NP98 299 aaPredicted RBP14.14□□□□□ -0.15
CALD1-204ENST00000417172 C9orf170A2RU37 121 aa14.13□□□□□ -0.15
CALD1-204ENST00000417172 A6NNC1 897 aa14.13□□□□□ -0.15
CALD1-204ENST00000417172 FCN3O75636 299 aa14.13□□□□□ -0.15
CALD1-204ENST00000417172 MUC1P15941 1255 aaPredicted RBP14.13□□□□□ -0.15
CALD1-204ENST00000417172 SUPT4H1P63272 117 aaKnown RBP14.13□□□□□ -0.15
CALD1-204ENST00000417172 ZNF788Q6ZQV5 615 aa14.13□□□□□ -0.15
CALD1-204ENST00000417172 ZNF561Q8N587 486 aa14.13□□□□□ -0.15
CALD1-204ENST00000417172 SDSLQ96GA7 329 aa14.13□□□□□ -0.15
CALD1-204ENST00000417172 CABLES2Q9BTV7 478 aa14.13□□□□□ -0.15
CALD1-204ENST00000417172 MGAT4CQ9UBM8 478 aa14.13□□□□□ -0.15
CALD1-204ENST00000417172 PPIAL4EA0A075B759 164 aa14.13□□□□□ -0.15
CALD1-204ENST00000417172 TRBV6-7A0A0A0MS04 114 aa14.13□□□□□ -0.15
CALD1-204ENST00000417172 PPIAL4DF5H284 164 aa14.13□□□□□ -0.15
CALD1-204ENST00000417172 LGALS8O00214 317 aa14.13□□□□□ -0.15
CALD1-204ENST00000417172 TMPRSS2O15393 492 aa14.13□□□□□ -0.15
CALD1-204ENST00000417172 SIX6O95475 246 aa14.13□□□□□ -0.15
CALD1-204ENST00000417172 ZNF728P0DKX0 622 aa14.13□□□□□ -0.15
CALD1-204ENST00000417172 PPIAL4FP0DN26 164 aa14.13□□□□□ -0.15
CALD1-204ENST00000417172 HERV-K104P61576 105 aa14.13□□□□□ -0.15
CALD1-204ENST00000417172 SLC9A3R2Q15599 337 aa14.13□□□□□ -0.15
CALD1-204ENST00000417172 PHLDA2Q53GA4 152 aa14.13□□□□□ -0.15
CALD1-204ENST00000417172 LYPD2Q6UXB3 125 aa14.13□□□□□ -0.15
CALD1-204ENST00000417172 LYG2Q86SG7 212 aa14.13□□□□□ -0.15
CALD1-204ENST00000417172 GPHA2Q96T91 129 aa14.13□□□□□ -0.15
CALD1-204ENST00000417172 PPIAL4AQ9Y536 164 aa14.13□□□□□ -0.15
CALD1-204ENST00000417172 YLPM1P49750 1951 aaKnown RBP14.13□□□□□ -0.15
CALD1-204ENST00000417172 MGST3O14880 152 aa14.12□□□□□ -0.15
CALD1-204ENST00000417172 KCNJ3P48549 501 aa14.12□□□□□ -0.15
CALD1-204ENST00000417172 EIF2B2P49770 351 aaKnown RBP14.12□□□□□ -0.15
CALD1-204ENST00000417172 IL13RA1P78552 427 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms