RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 ZNF665Q9H7R5 613 aa13.3□□□□□ -0.28
LIMS2-205ENST00000409455 ETV2O00321 342 aaPredicted RBP13.3□□□□□ -0.28
LIMS2-205ENST00000409455 IL18BPO95998 194 aa13.3□□□□□ -0.28
LIMS2-205ENST00000409455 JMJD7P0C870 316 aa13.3□□□□□ -0.28
LIMS2-205ENST00000409455 CLN3Q13286 438 aa13.3□□□□□ -0.28
LIMS2-205ENST00000409455 CNN3Q15417 329 aaKnown RBP13.3□□□□□ -0.28
LIMS2-205ENST00000409455 PIGYQ3MUY2 71 aa13.3□□□□□ -0.28
LIMS2-205ENST00000409455 COA6Q5JTJ3 125 aaKnown RBP13.3□□□□□ -0.28
LIMS2-205ENST00000409455 SLC25A26Q70HW3 274 aa13.3□□□□□ -0.28
LIMS2-205ENST00000409455 HIST1H2AAQ96QV6 131 aa13.3□□□□□ -0.28
LIMS2-205ENST00000409455 P2RX4Q99571 388 aa13.3□□□□□ -0.28
LIMS2-205ENST00000409455 P4HTMQ9NXG6 502 aa13.3□□□□□ -0.28
LIMS2-205ENST00000409455 ZNF814B7Z6K7 855 aa13.29□□□□□ -0.28
LIMS2-205ENST00000409455 SLC33A1O00400 549 aaPredicted RBP13.29□□□□□ -0.28
LIMS2-205ENST00000409455 GALR2O43603 387 aaPredicted RBP13.29□□□□□ -0.28
LIMS2-205ENST00000409455 TMEM50AO95807 157 aa13.29□□□□□ -0.28
LIMS2-205ENST00000409455 TK1P04183 234 aa13.29□□□□□ -0.28
LIMS2-205ENST00000409455 OR8B8Q15620 311 aa13.29□□□□□ -0.28
LIMS2-205ENST00000409455 Q6ZSR3 168 aa13.29□□□□□ -0.28
LIMS2-205ENST00000409455 SELENOHQ8IZQ5 122 aaKnown RBP13.29□□□□□ -0.28
LIMS2-205ENST00000409455 ATG101Q9BSB4 218 aa13.29□□□□□ -0.28
LIMS2-205ENST00000409455 CHST1O43916 411 aa13.29□□□□□ -0.28
LIMS2-205ENST00000409455 OR2J2O76002 312 aa13.29□□□□□ -0.28
LIMS2-205ENST00000409455 NXPH3O95157 252 aa13.29□□□□□ -0.28
LIMS2-205ENST00000409455 COX5BP10606 129 aa13.29□□□□□ -0.28
LIMS2-205ENST00000409455 TUBG1P23258 451 aa13.29□□□□□ -0.28
LIMS2-205ENST00000409455 ID3Q02535 119 aa13.29□□□□□ -0.28
LIMS2-205ENST00000409455 HNF4GQ14541 408 aa13.29□□□□□ -0.28
LIMS2-205ENST00000409455 EXT1Q16394 746 aa13.29□□□□□ -0.28
LIMS2-205ENST00000409455 ABLIM2Q6H8Q1 611 aa13.29□□□□□ -0.28
LIMS2-205ENST00000409455 OR2V1Q8NHB1 315 aa13.29□□□□□ -0.28
LIMS2-205ENST00000409455 ACY3Q96HD9 319 aa13.29□□□□□ -0.28
LIMS2-205ENST00000409455 VAX2Q9UIW0 290 aa13.29□□□□□ -0.28
LIMS2-205ENST00000409455 TRBV11-1A0A0K0K1C0 115 aa13.28□□□□□ -0.28
LIMS2-205ENST00000409455 DUXBA0A1W2PPF3 345 aa13.28□□□□□ -0.28
LIMS2-205ENST00000409455 PPP5D1E7EU14 171 aa13.28□□□□□ -0.28
LIMS2-205ENST00000409455 G0S2P27469 103 aa13.28□□□□□ -0.28
LIMS2-205ENST00000409455 GNRHRP30968 328 aa13.28□□□□□ -0.28
LIMS2-205ENST00000409455 CLDN17P56750 224 aa13.28□□□□□ -0.28
LIMS2-205ENST00000409455 RELQ04864 619 aaPredicted RBP13.28□□□□□ -0.28
LIMS2-205ENST00000409455 MALLQ13021 153 aa13.28□□□□□ -0.28
LIMS2-205ENST00000409455 LCN15Q6UWW0 184 aa13.28□□□□□ -0.28
LIMS2-205ENST00000409455 OSR2Q8N2R0 312 aa13.28□□□□□ -0.28
LIMS2-205ENST00000409455 SPTSSAQ969W0 71 aa13.28□□□□□ -0.28
LIMS2-205ENST00000409455 BORCS8Q96FH0 119 aa13.28□□□□□ -0.28
LIMS2-205ENST00000409455 SIGLEC12Q96PQ1 595 aa13.28□□□□□ -0.28
LIMS2-205ENST00000409455 WDR54Q9H977 334 aa13.28□□□□□ -0.28
LIMS2-205ENST00000409455 LAMP3Q9UQV4 416 aa13.28□□□□□ -0.28
LIMS2-205ENST00000409455 NCOA6Q14686 2063 aaPredicted RBP13.28□□□□□ -0.28
LIMS2-205ENST00000409455 RTTNQ86VV8 2226 aa13.28□□□□□ -0.28
LIMS2-205ENST00000409455 CLEC18AA5D8T8 446 aa13.28□□□□□ -0.28
LIMS2-205ENST00000409455 KLF7O75840 302 aaPredicted RBP13.28□□□□□ -0.28
LIMS2-205ENST00000409455 VDAC1P21796 283 aa13.28□□□□□ -0.28
LIMS2-205ENST00000409455 MSX1P28360 303 aa13.28□□□□□ -0.28
LIMS2-205ENST00000409455 ADIRFQ15847 76 aa13.28□□□□□ -0.28
LIMS2-205ENST00000409455 IQCJQ1A5X6 159 aa13.28□□□□□ -0.28
LIMS2-205ENST00000409455 SNAI3Q3KNW1 292 aa13.28□□□□□ -0.28
LIMS2-205ENST00000409455 SLC25A53Q5H9E4 307 aa13.28□□□□□ -0.28
LIMS2-205ENST00000409455 NCR3LG1Q68D85 454 aa13.28□□□□□ -0.28
LIMS2-205ENST00000409455 ZNF66Q6ZN08 573 aa13.28□□□□□ -0.28
LIMS2-205ENST00000409455 TGIF2LYQ8IUE0 185 aa13.28□□□□□ -0.28
LIMS2-205ENST00000409455 CLEC18CQ8NCF0 446 aa13.28□□□□□ -0.28
LIMS2-205ENST00000409455 POC1BQ8TC44 478 aa13.28□□□□□ -0.28
LIMS2-205ENST00000409455 ADGRG7Q96K78 797 aa13.28□□□□□ -0.28
LIMS2-205ENST00000409455 ST3GAL6Q9Y274 331 aa13.28□□□□□ -0.28
LIMS2-205ENST00000409455 RALGAPA1Q6GYQ0 2036 aa13.27□□□□□ -0.28
LIMS2-205ENST00000409455 B4E171 279 aa13.27□□□□□ -0.29
LIMS2-205ENST00000409455 OTX1P32242 354 aaPredicted RBP13.27□□□□□ -0.29
LIMS2-205ENST00000409455 TSPAN7P41732 249 aa13.27□□□□□ -0.29
LIMS2-205ENST00000409455 MRPS34P82930 218 aaKnown RBP13.27□□□□□ -0.29
LIMS2-205ENST00000409455 P2RY6Q15077 328 aa13.27□□□□□ -0.29
LIMS2-205ENST00000409455 NMSQ5H8A3 153 aa13.27□□□□□ -0.29
LIMS2-205ENST00000409455 WDR25Q64LD2 544 aaPredicted RBP13.27□□□□□ -0.29
LIMS2-205ENST00000409455 TMEM18Q96B42 140 aa13.27□□□□□ -0.29
LIMS2-205ENST00000409455 ZNF442Q9H7R0 627 aa13.27□□□□□ -0.29
LIMS2-205ENST00000409455 RPRMQ9NS64 109 aa13.27□□□□□ -0.29
LIMS2-205ENST00000409455 PLEK2Q9NYT0 353 aa13.27□□□□□ -0.29
LIMS2-205ENST00000409455 C19orf25Q9UFG5 118 aaPredicted RBP13.27□□□□□ -0.29
LIMS2-205ENST00000409455 RNF150Q9ULK6 438 aa13.27□□□□□ -0.29
LIMS2-205ENST00000409455 LOXL2Q9Y4K0 774 aa13.27□□□□□ -0.29
LIMS2-205ENST00000409455 IGKV1-27A0A075B6S5 117 aa13.27□□□□□ -0.29
LIMS2-205ENST00000409455 CEBPZOSA8MTT3 80 aa13.27□□□□□ -0.29
LIMS2-205ENST00000409455 PDCD6O75340 191 aa13.27□□□□□ -0.29
LIMS2-205ENST00000409455 IFNA1P01562 189 aa13.27□□□□□ -0.29
LIMS2-205ENST00000409455 HLA-HP01893 362 aa13.27□□□□□ -0.29
LIMS2-205ENST00000409455 UMODP07911 640 aa13.27□□□□□ -0.29
LIMS2-205ENST00000409455 TCN2P20062 427 aa13.27□□□□□ -0.29
LIMS2-205ENST00000409455 RAB4AP20338 218 aa13.27□□□□□ -0.29
LIMS2-205ENST00000409455 IDH3GP51553 393 aaPredicted RBP13.27□□□□□ -0.29
LIMS2-205ENST00000409455 PAX5Q02548 391 aa13.27□□□□□ -0.29
LIMS2-205ENST00000409455 ENDOGQ14249 297 aaKnown RBP13.27□□□□□ -0.29
LIMS2-205ENST00000409455 RSPO4Q2I0M5 234 aaPredicted RBP13.27□□□□□ -0.29
LIMS2-205ENST00000409455 LHFPL2Q6ZUX7 228 aa13.27□□□□□ -0.29
LIMS2-205ENST00000409455 SCGB1C1Q8TD33 95 aa13.27□□□□□ -0.29
LIMS2-205ENST00000409455 OR5B12Q96R08 314 aa13.27□□□□□ -0.29
LIMS2-205ENST00000409455 SNHG12Q9BXW3 62 aa13.27□□□□□ -0.29
LIMS2-205ENST00000409455 NAT8Q9UHE5 227 aa13.27□□□□□ -0.29
LIMS2-205ENST00000409455 AQP7P3A6NL99 342 aa13.26□□□□□ -0.29
LIMS2-205ENST00000409455 CD55P08174 381 aa13.26□□□□□ -0.29
LIMS2-205ENST00000409455 FGF8P55075 233 aaPredicted RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms