RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 PPP1R3CQ9UQK1 317 aa21.46■■□□□ 1.03
CPNE1-205ENST00000401607 A0A0B4J2A0 478 aa21.46■■□□□ 1.03
CPNE1-205ENST00000401607 CRYM-AS1A6NIL9 109 aa21.46■■□□□ 1.03
CPNE1-205ENST00000401607 DIRAS3O95661 229 aa21.46■■□□□ 1.03
CPNE1-205ENST00000401607 PIGPP57054 158 aa21.46■■□□□ 1.03
CPNE1-205ENST00000401607 TESK1Q15569 626 aa21.46■■□□□ 1.03
CPNE1-205ENST00000401607 EFNB3Q15768 340 aa21.46■■□□□ 1.03
CPNE1-205ENST00000401607 ANKRD55Q3KP44 614 aa21.46■■□□□ 1.03
CPNE1-205ENST00000401607 KCTD9Q7L273 389 aa21.46■■□□□ 1.03
CPNE1-205ENST00000401607 PIK3IP1Q96FE7 263 aa21.46■■□□□ 1.03
CPNE1-205ENST00000401607 SHPKQ9UHJ6 478 aa21.46■■□□□ 1.03
CPNE1-205ENST00000401607 TPRP12270 2363 aaKnown RBP21.45■■□□□ 1.02
CPNE1-205ENST00000401607 HCFC1P51610 2035 aa21.45■■□□□ 1.02
CPNE1-205ENST00000401607 TNFRSF1AP19438 455 aa21.45■■□□□ 1.02
CPNE1-205ENST00000401607 FAM209AQ5JX71 171 aa21.45■■□□□ 1.02
CPNE1-205ENST00000401607 OR11L1Q8NGX0 322 aa21.45■■□□□ 1.02
CPNE1-205ENST00000401607 ANGPTL6Q8NI99 470 aa21.45■■□□□ 1.02
CPNE1-205ENST00000401607 DCAF16Q9NXF7 216 aa21.45■■□□□ 1.02
CPNE1-205ENST00000401607 ICE1Q9Y2F5 2266 aa21.44■■□□□ 1.02
CPNE1-205ENST00000401607 NPIPB11E5RHQ5 1161 aa21.44■■□□□ 1.02
CPNE1-205ENST00000401607 ZG16O60844 167 aa21.44■■□□□ 1.02
CPNE1-205ENST00000401607 GABRA2P47869 451 aa21.44■■□□□ 1.02
CPNE1-205ENST00000401607 PAX5Q02548 391 aa21.44■■□□□ 1.02
CPNE1-205ENST00000401607 LPCAT3Q6P1A2 487 aa21.44■■□□□ 1.02
CPNE1-205ENST00000401607 H1FOOQ8IZA3 346 aaPredicted RBP21.44■■□□□ 1.02
CPNE1-205ENST00000401607 C9orf62Q8N4C0 152 aa21.44■■□□□ 1.02
CPNE1-205ENST00000401607 TAF9BQ9HBM6 251 aa21.44■■□□□ 1.02
CPNE1-205ENST00000401607 SLC2A9Q9NRM0 540 aa21.44■■□□□ 1.02
CPNE1-205ENST00000401607 CISD1Q9NZ45 108 aaKnown RBP21.44■■□□□ 1.02
CPNE1-205ENST00000401607 OR1A1Q9P1Q5 309 aa21.44■■□□□ 1.02
CPNE1-205ENST00000401607 CACNA1DQ01668 2161 aa21.44■■□□□ 1.02
CPNE1-205ENST00000401607 NBASA2RRP1 2371 aa21.44■■□□□ 1.02
CPNE1-205ENST00000401607 IGKV1D-13A0A0B4J2D9 117 aa21.43■■□□□ 1.02
CPNE1-205ENST00000401607 IGKV1-13P0DP09 117 aa21.43■■□□□ 1.02
CPNE1-205ENST00000401607 SRSF4Q08170 494 aaKnown RBP21.43■■□□□ 1.02
CPNE1-205ENST00000401607 ABCA11PQ4W5N1 156 aa21.43■■□□□ 1.02
CPNE1-205ENST00000401607 PHLDA2Q53GA4 152 aa21.43■■□□□ 1.02
CPNE1-205ENST00000401607 SGPP2Q8IWX5 399 aa21.43■■□□□ 1.02
CPNE1-205ENST00000401607 OR10J5Q8NHC4 309 aa21.43■■□□□ 1.02
CPNE1-205ENST00000401607 GRPEL2Q8TAA5 225 aa21.43■■□□□ 1.02
CPNE1-205ENST00000401607 UBALD1Q8TB05 177 aa21.43■■□□□ 1.02
CPNE1-205ENST00000401607 ITLN2Q8WWU7 325 aaPredicted RBP21.43■■□□□ 1.02
CPNE1-205ENST00000401607 ASB13Q8WXK3 278 aa21.43■■□□□ 1.02
CPNE1-205ENST00000401607 TMEM204Q9BSN7 226 aa21.43■■□□□ 1.02
CPNE1-205ENST00000401607 GLIPR1P48060 266 aa21.43■■□□□ 1.02
CPNE1-205ENST00000401607 KRBOX4Q5JUW0 171 aa21.43■■□□□ 1.02
CPNE1-205ENST00000401607 PRR18Q8N4B5 295 aa21.43■■□□□ 1.02
CPNE1-205ENST00000401607 COQ8AQ8NI60 647 aa21.43■■□□□ 1.02
CPNE1-205ENST00000401607 IL1F10Q8WWZ1 152 aa21.43■■□□□ 1.02
CPNE1-205ENST00000401607 SNX22Q96L94 193 aa21.43■■□□□ 1.02
CPNE1-205ENST00000401607 B9A039 149 aa21.42■■□□□ 1.02
CPNE1-205ENST00000401607 CLDN14O95500 239 aa21.42■■□□□ 1.02
CPNE1-205ENST00000401607 IFNA2P01563 188 aa21.42■■□□□ 1.02
CPNE1-205ENST00000401607 GNRHRP30968 328 aa21.42■■□□□ 1.02
CPNE1-205ENST00000401607 STUMQ69YW2 141 aa21.42■■□□□ 1.02
CPNE1-205ENST00000401607 LDLRAD3Q86YD5 345 aa21.42■■□□□ 1.02
CPNE1-205ENST00000401607 ZNF808Q8N4W9 903 aaPredicted RBP21.42■■□□□ 1.02
CPNE1-205ENST00000401607 TPRX1Q8N7U7 411 aa21.42■■□□□ 1.02
CPNE1-205ENST00000401607 ZBTB8BQ8NAP8 495 aaPredicted RBP21.42■■□□□ 1.02
CPNE1-205ENST00000401607 RTN4IP1Q8WWV3 396 aaPredicted RBP21.42■■□□□ 1.02
CPNE1-205ENST00000401607 NAA60Q9H7X0 242 aa21.42■■□□□ 1.02
CPNE1-205ENST00000401607 SAP30LQ9HAJ7 183 aa21.42■■□□□ 1.02
CPNE1-205ENST00000401607 DYNLRB1Q9NP97 96 aa21.42■■□□□ 1.02
CPNE1-205ENST00000401607 MAB21L2Q9Y586 359 aa21.42■■□□□ 1.02
CPNE1-205ENST00000401607 DYSFO75923 2080 aa21.42■■□□□ 1.02
CPNE1-205ENST00000401607 TEX13DA0A0J9YY54 714 aaPredicted RBP21.41■■□□□ 1.02
CPNE1-205ENST00000401607 IRF2P14316 349 aa21.41■■□□□ 1.02
CPNE1-205ENST00000401607 IFITM2Q01629 132 aa21.41■■□□□ 1.02
CPNE1-205ENST00000401607 ZNF672Q499Z4 452 aaPredicted RBP21.41■■□□□ 1.02
CPNE1-205ENST00000401607 SECTM1Q8WVN6 248 aa21.41■■□□□ 1.02
CPNE1-205ENST00000401607 EGLN1Q9GZT9 426 aa21.41■■□□□ 1.02
CPNE1-205ENST00000401607 DIDO1Q9BTC0 2240 aaKnown RBP21.41■■□□□ 1.02
CPNE1-205ENST00000401607 C12orf77C9JDV5 145 aa21.41■■□□□ 1.02
CPNE1-205ENST00000401607 OR2W1Q9Y3N9 320 aa21.41■■□□□ 1.02
CPNE1-205ENST00000401607 OOEPA6NGQ2 149 aa21.4■■□□□ 1.02
CPNE1-205ENST00000401607 RGS11O94810 467 aa21.4■■□□□ 1.02
CPNE1-205ENST00000401607 SWI5Q1ZZU3 235 aa21.4■■□□□ 1.02
CPNE1-205ENST00000401607 TEX36Q5VZQ5 186 aa21.4■■□□□ 1.02
CPNE1-205ENST00000401607 ZNRF1Q8ND25 227 aa21.4■■□□□ 1.02
CPNE1-205ENST00000401607 MRGPRDQ8TDS7 321 aa21.4■■□□□ 1.02
CPNE1-205ENST00000401607 GALNT14Q96FL9 552 aa21.4■■□□□ 1.02
CPNE1-205ENST00000401607 SLC5A7Q9GZV3 580 aa21.4■■□□□ 1.02
CPNE1-205ENST00000401607 MS4A5Q9H3V2 200 aa21.4■■□□□ 1.02
CPNE1-205ENST00000401607 KCNIP1Q9NZI2 227 aa21.4■■□□□ 1.02
CPNE1-205ENST00000401607 ACACBO00763 2458 aa21.39■■□□□ 1.02
CPNE1-205ENST00000401607 K7N7A8 449 aa21.39■■□□□ 1.01
CPNE1-205ENST00000401607 MGST3O14880 152 aa21.39■■□□□ 1.01
CPNE1-205ENST00000401607 AGAP20933 346 aa21.39■■□□□ 1.01
CPNE1-205ENST00000401607 EDDM3AQ14507 147 aa21.39■■□□□ 1.01
CPNE1-205ENST00000401607 ZNF818PQ6ZRF7 136 aa21.39■■□□□ 1.01
CPNE1-205ENST00000401607 OR13A1Q8NGR1 328 aa21.39■■□□□ 1.01
CPNE1-205ENST00000401607 OR1L1Q8NH94 360 aa21.39■■□□□ 1.01
CPNE1-205ENST00000401607 PPP1R35Q8TAP8 253 aa21.39■■□□□ 1.01
CPNE1-205ENST00000401607 SDSLQ96GA7 329 aa21.39■■□□□ 1.01
CPNE1-205ENST00000401607 SEC22AQ96IW7 307 aa21.39■■□□□ 1.01
CPNE1-205ENST00000401607 RAB18Q9NP72 206 aa21.39■■□□□ 1.01
CPNE1-205ENST00000401607 HSPB11Q9Y547 144 aa21.39■■□□□ 1.01
CPNE1-205ENST00000401607 ADAP1O75689 374 aa21.38■■□□□ 1.01
CPNE1-205ENST00000401607 CD8AP01732 235 aa21.38■■□□□ 1.01
CPNE1-205ENST00000401607 SNRPD2P62316 118 aaKnown RBP21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms