RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 SPP1P10451 314 aa13.59□□□□□ -0.23
CHRFAM7A-203ENST00000401522 UCP2P55851 309 aa13.59□□□□□ -0.23
CHRFAM7A-203ENST00000401522 SLC25A26Q70HW3 274 aa13.59□□□□□ -0.23
CHRFAM7A-203ENST00000401522 CALHM1Q8IU99 346 aa13.59□□□□□ -0.23
CHRFAM7A-203ENST00000401522 OR11L1Q8NGX0 322 aa13.59□□□□□ -0.23
CHRFAM7A-203ENST00000401522 WFDC1Q9HC57 220 aa13.59□□□□□ -0.23
CHRFAM7A-203ENST00000401522 STRAPQ9Y3F4 350 aaKnown RBP13.59□□□□□ -0.23
CHRFAM7A-203ENST00000401522 CHD6Q8TD26 2715 aa13.59□□□□□ -0.23
CHRFAM7A-203ENST00000401522 PQLC2LA1A4F0 135 aa13.58□□□□□ -0.23
CHRFAM7A-203ENST00000401522 C9JQL5 133 aa13.58□□□□□ -0.23
CHRFAM7A-203ENST00000401522 ZNF587BE7ETH6 402 aa13.58□□□□□ -0.23
CHRFAM7A-203ENST00000401522 MPPED1O15442 326 aa13.58□□□□□ -0.23
CHRFAM7A-203ENST00000401522 CDS2O95674 445 aa13.58□□□□□ -0.23
CHRFAM7A-203ENST00000401522 PAX6P26367 422 aa13.58□□□□□ -0.23
CHRFAM7A-203ENST00000401522 RAB13P51153 203 aa13.58□□□□□ -0.23
CHRFAM7A-203ENST00000401522 PEA15Q15121 130 aa13.58□□□□□ -0.23
CHRFAM7A-203ENST00000401522 AVPI1Q5T686 147 aa13.58□□□□□ -0.23
CHRFAM7A-203ENST00000401522 Q6ZPA2 131 aa13.58□□□□□ -0.23
CHRFAM7A-203ENST00000401522 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.58□□□□□ -0.23
CHRFAM7A-203ENST00000401522 IQCF2Q8IXL9 164 aa13.58□□□□□ -0.23
CHRFAM7A-203ENST00000401522 CPEB3Q8NE35 698 aaKnown RBP13.58□□□□□ -0.23
CHRFAM7A-203ENST00000401522 OR4D5Q8NGN0 318 aa13.58□□□□□ -0.23
CHRFAM7A-203ENST00000401522 APH1AQ96BI3 265 aa13.58□□□□□ -0.23
CHRFAM7A-203ENST00000401522 BSCL2Q96G97 398 aaPredicted RBP13.58□□□□□ -0.23
CHRFAM7A-203ENST00000401522 PLSCR4Q9NRQ2 329 aa13.58□□□□□ -0.23
CHRFAM7A-203ENST00000401522 SMCO4Q9NRQ5 59 aa13.58□□□□□ -0.23
CHRFAM7A-203ENST00000401522 RCL1Q9Y2P8 373 aaKnown RBP13.58□□□□□ -0.23
CHRFAM7A-203ENST00000401522 A0A0G2JNJ9 132 aa13.58□□□□□ -0.24
CHRFAM7A-203ENST00000401522 C3orf85A0A1B0GTC6 90 aa13.58□□□□□ -0.24
CHRFAM7A-203ENST00000401522 NFYBP25208 207 aa13.58□□□□□ -0.24
CHRFAM7A-203ENST00000401522 SNCAP37840 140 aa13.58□□□□□ -0.24
CHRFAM7A-203ENST00000401522 HOXA1P49639 335 aaPredicted RBP13.58□□□□□ -0.24
CHRFAM7A-203ENST00000401522 RND3P61587 244 aa13.58□□□□□ -0.24
CHRFAM7A-203ENST00000401522 GNMTQ14749 295 aa13.58□□□□□ -0.24
CHRFAM7A-203ENST00000401522 DAZAP2Q15038 168 aaPredicted RBP13.58□□□□□ -0.24
CHRFAM7A-203ENST00000401522 DPPA2Q7Z7J5 298 aa13.58□□□□□ -0.24
CHRFAM7A-203ENST00000401522 CNEP1R1Q8N9A8 125 aa13.58□□□□□ -0.24
CHRFAM7A-203ENST00000401522 OR52M1Q8NGK5 317 aa13.58□□□□□ -0.24
CHRFAM7A-203ENST00000401522 STARD4Q96DR4 205 aa13.58□□□□□ -0.24
CHRFAM7A-203ENST00000401522 SFXN3Q9BWM7 321 aa13.58□□□□□ -0.24
CHRFAM7A-203ENST00000401522 BIN3Q9NQY0 253 aa13.58□□□□□ -0.24
CHRFAM7A-203ENST00000401522 Q9UFV3 132 aa13.58□□□□□ -0.24
CHRFAM7A-203ENST00000401522 ZDHHC8Q9ULC8 765 aa13.58□□□□□ -0.24
CHRFAM7A-203ENST00000401522 TRDCB7Z8K6 153 aa13.57□□□□□ -0.24
CHRFAM7A-203ENST00000401522 CCL21O00585 134 aa13.57□□□□□ -0.24
CHRFAM7A-203ENST00000401522 IL18BPO95998 194 aa13.57□□□□□ -0.24
CHRFAM7A-203ENST00000401522 COX5BP10606 129 aa13.57□□□□□ -0.24
CHRFAM7A-203ENST00000401522 GNLYP22749 145 aa13.57□□□□□ -0.24
CHRFAM7A-203ENST00000401522 CAMLGP49069 296 aa13.57□□□□□ -0.24
CHRFAM7A-203ENST00000401522 ARF1P84077 181 aaKnown RBP13.57□□□□□ -0.24
CHRFAM7A-203ENST00000401522 PDCD1Q15116 288 aa13.57□□□□□ -0.24
CHRFAM7A-203ENST00000401522 MIDNQ504T8 468 aa13.57□□□□□ -0.24
CHRFAM7A-203ENST00000401522 SLC35G3Q8N808 338 aa13.57□□□□□ -0.24
CHRFAM7A-203ENST00000401522 DMBX1Q8NFW5 382 aa13.57□□□□□ -0.24
CHRFAM7A-203ENST00000401522 OR56B2PQ8NGI1 322 aa13.57□□□□□ -0.24
CHRFAM7A-203ENST00000401522 RND1Q92730 232 aa13.57□□□□□ -0.24
CHRFAM7A-203ENST00000401522 TP53RKQ96S44 253 aa13.57□□□□□ -0.24
CHRFAM7A-203ENST00000401522 SPIN2AQ99865 258 aa13.57□□□□□ -0.24
CHRFAM7A-203ENST00000401522 SPIN2BQ9BPZ2 258 aa13.57□□□□□ -0.24
CHRFAM7A-203ENST00000401522 REPIN1Q9BWE0 567 aaKnown RBP13.57□□□□□ -0.24
CHRFAM7A-203ENST00000401522 PAPOLGQ9BWT3 736 aaKnown RBP13.57□□□□□ -0.24
CHRFAM7A-203ENST00000401522 TMEM222Q9H0R3 208 aa13.57□□□□□ -0.24
CHRFAM7A-203ENST00000401522 CACFD1Q9UGQ2 172 aa13.57□□□□□ -0.24
CHRFAM7A-203ENST00000401522 NBASA2RRP1 2371 aa13.57□□□□□ -0.24
CHRFAM7A-203ENST00000401522 CGAP01215 116 aa13.56□□□□□ -0.24
CHRFAM7A-203ENST00000401522 NPBWR2P48146 333 aa13.56□□□□□ -0.24
CHRFAM7A-203ENST00000401522 FGF12P61328 243 aa13.56□□□□□ -0.24
CHRFAM7A-203ENST00000401522 VWA1Q6PCB0 445 aa13.56□□□□□ -0.24
CHRFAM7A-203ENST00000401522 CLEC9AQ6UXN8 241 aa13.56□□□□□ -0.24
CHRFAM7A-203ENST00000401522 RXFP4Q8TDU9 374 aa13.56□□□□□ -0.24
CHRFAM7A-203ENST00000401522 ABHD14BQ96IU4 210 aa13.56□□□□□ -0.24
CHRFAM7A-203ENST00000401522 AKR1E2Q96JD6 320 aa13.56□□□□□ -0.24
CHRFAM7A-203ENST00000401522 TMEM56Q96MV1 263 aa13.56□□□□□ -0.24
CHRFAM7A-203ENST00000401522 C12orf49Q9H741 205 aa13.56□□□□□ -0.24
CHRFAM7A-203ENST00000401522 C19orf12Q9NSK7 152 aa13.56□□□□□ -0.24
CHRFAM7A-203ENST00000401522 TMEM56-RWDD3S4R434 201 aa13.56□□□□□ -0.24
CHRFAM7A-203ENST00000401522 FAM208BQ5VWN6 2430 aa13.56□□□□□ -0.24
CHRFAM7A-203ENST00000401522 CNOT4O95628 575 aaKnown RBP13.56□□□□□ -0.24
CHRFAM7A-203ENST00000401522 TK1P04183 234 aa13.56□□□□□ -0.24
CHRFAM7A-203ENST00000401522 UQCRFS1P47985 274 aa13.56□□□□□ -0.24
CHRFAM7A-203ENST00000401522 ZNF616Q08AN1 781 aa13.56□□□□□ -0.24
CHRFAM7A-203ENST00000401522 PRDX4Q13162 271 aa13.56□□□□□ -0.24
CHRFAM7A-203ENST00000401522 IGSF11Q5DX21 431 aa13.56□□□□□ -0.24
CHRFAM7A-203ENST00000401522 MEX3BQ6ZN04 569 aaKnown RBP13.56□□□□□ -0.24
CHRFAM7A-203ENST00000401522 PRR7Q8TB68 274 aa13.56□□□□□ -0.24
CHRFAM7A-203ENST00000401522 SECTM1Q8WVN6 248 aa13.56□□□□□ -0.24
CHRFAM7A-203ENST00000401522 HPSE2Q8WWQ2 592 aa13.56□□□□□ -0.24
CHRFAM7A-203ENST00000401522 BOD1Q96IK1 185 aa13.56□□□□□ -0.24
CHRFAM7A-203ENST00000401522 Q9N2K0 584 aa13.56□□□□□ -0.24
CHRFAM7A-203ENST00000401522 SLC7A10Q9NS82 523 aa13.56□□□□□ -0.24
CHRFAM7A-203ENST00000401522 DUXBA0A1W2PPF3 345 aa13.55□□□□□ -0.24
CHRFAM7A-203ENST00000401522 MEX3AA1L020 520 aaKnown RBP13.55□□□□□ -0.24
CHRFAM7A-203ENST00000401522 NAPSAO96009 420 aa13.55□□□□□ -0.24
CHRFAM7A-203ENST00000401522 FOLR2P14207 255 aa13.55□□□□□ -0.24
CHRFAM7A-203ENST00000401522 PRKACAP17612 351 aa13.55□□□□□ -0.24
CHRFAM7A-203ENST00000401522 BCL3P20749 454 aa13.55□□□□□ -0.24
CHRFAM7A-203ENST00000401522 GUK1Q16774 197 aa13.55□□□□□ -0.24
CHRFAM7A-203ENST00000401522 MPV17LQ2QL34 196 aa13.55□□□□□ -0.24
CHRFAM7A-203ENST00000401522 CEACAM21Q3KPI0 293 aa13.55□□□□□ -0.24
CHRFAM7A-203ENST00000401522 FBXW9Q5XUX1 488 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms