RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 A6NNC1 897 aa9.78□□□□□ -0.84
SKA3-203ENST00000400018 OR2AT4A6NND4 320 aa9.78□□□□□ -0.84
SKA3-203ENST00000400018 LPLP06858 475 aa9.78□□□□□ -0.84
SKA3-203ENST00000400018 IGHV3-43DP0DP04 118 aa9.78□□□□□ -0.84
SKA3-203ENST00000400018 IGFBP2P18065 325 aa9.78□□□□□ -0.84
SKA3-203ENST00000400018 NFYAP23511 347 aaPredicted RBP9.78□□□□□ -0.84
SKA3-203ENST00000400018 SSTP61278 116 aa9.78□□□□□ -0.84
SKA3-203ENST00000400018 SWI5Q1ZZU3 235 aa9.78□□□□□ -0.84
SKA3-203ENST00000400018 CUBNO60494 3623 aa9.78□□□□□ -0.84
SKA3-203ENST00000400018 A8MXK9 166 aa9.78□□□□□ -0.84
SKA3-203ENST00000400018 PDCD6O75340 191 aa9.78□□□□□ -0.84
SKA3-203ENST00000400018 AMY2AP04746 511 aa9.78□□□□□ -0.84
SKA3-203ENST00000400018 UBBP0CG47 229 aa9.78□□□□□ -0.84
SKA3-203ENST00000400018 RAB13P51153 203 aa9.78□□□□□ -0.84
SKA3-203ENST00000400018 SEC61A1P61619 476 aaKnown RBP9.78□□□□□ -0.84
SKA3-203ENST00000400018 PITPNAQ00169 270 aa9.78□□□□□ -0.84
SKA3-203ENST00000400018 SP5Q6BEB4 398 aaPredicted RBP9.78□□□□□ -0.84
SKA3-203ENST00000400018 CCDC54Q8NEL0 328 aa9.78□□□□□ -0.84
SKA3-203ENST00000400018 OR52B4Q8NGK2 314 aa9.78□□□□□ -0.84
SKA3-203ENST00000400018 LEAP2Q969E1 77 aa9.78□□□□□ -0.84
SKA3-203ENST00000400018 UNC79Q9P2D8 2635 aa9.77□□□□□ -0.84
SKA3-203ENST00000400018 TMPRSS2O15393 492 aa9.77□□□□□ -0.84
SKA3-203ENST00000400018 ANXA7P20073 488 aaKnown RBP9.77□□□□□ -0.84
SKA3-203ENST00000400018 FUT3P21217 361 aa9.77□□□□□ -0.84
SKA3-203ENST00000400018 EDDM3BP56851 147 aa9.77□□□□□ -0.84
SKA3-203ENST00000400018 HFEQ30201 348 aa9.77□□□□□ -0.84
SKA3-203ENST00000400018 C3orf36Q3SXR2 165 aa9.77□□□□□ -0.84
SKA3-203ENST00000400018 POC1AQ8NBT0 407 aa9.77□□□□□ -0.84
SKA3-203ENST00000400018 MRGPRFQ96AM1 343 aa9.77□□□□□ -0.84
SKA3-203ENST00000400018 TMEM204Q9BSN7 226 aa9.77□□□□□ -0.84
SKA3-203ENST00000400018 ZNRD1Q9P1U0 126 aa9.77□□□□□ -0.84
SKA3-203ENST00000400018 KIF25Q9UIL4 384 aa9.77□□□□□ -0.84
SKA3-203ENST00000400018 ACANP16112 2415 aa9.77□□□□□ -0.85
SKA3-203ENST00000400018 ANKRD20A5PA0PJZ0 165 aa9.77□□□□□ -0.85
SKA3-203ENST00000400018 EIF3GO75821 320 aaKnown RBP eCLIP9.77□□□□□ -0.85
SKA3-203ENST00000400018 DANCRP0C864 163 aa9.77□□□□□ -0.85
SKA3-203ENST00000400018 ANXA3P12429 323 aa9.77□□□□□ -0.85
SKA3-203ENST00000400018 CD200P41217 278 aa9.77□□□□□ -0.85
SKA3-203ENST00000400018 DEFA5Q01523 94 aa9.77□□□□□ -0.85
SKA3-203ENST00000400018 STEAP1BQ6NZ63 245 aa9.77□□□□□ -0.85
SKA3-203ENST00000400018 NLRC3Q7RTR2 1065 aa9.77□□□□□ -0.85
SKA3-203ENST00000400018 MRGPRDQ8TDS7 321 aa9.77□□□□□ -0.85
SKA3-203ENST00000400018 PKIBQ9C010 78 aa9.77□□□□□ -0.85
SKA3-203ENST00000400018 FBLN5Q9UBX5 448 aa9.77□□□□□ -0.85
SKA3-203ENST00000400018 PRRC2AP48634 2157 aaKnown RBP9.77□□□□□ -0.85
SKA3-203ENST00000400018 GATCO43716 136 aaKnown RBP9.76□□□□□ -0.85
SKA3-203ENST00000400018 RAB3DO95716 219 aa9.76□□□□□ -0.85
SKA3-203ENST00000400018 FCGR3AP08637 254 aa9.76□□□□□ -0.85
SKA3-203ENST00000400018 ACAA1P09110 424 aaPredicted RBP9.76□□□□□ -0.85
SKA3-203ENST00000400018 DNASE1P24855 282 aa9.76□□□□□ -0.85
SKA3-203ENST00000400018 PRDX2P32119 198 aa9.76□□□□□ -0.85
SKA3-203ENST00000400018 SSTR5P35346 364 aa9.76□□□□□ -0.85
SKA3-203ENST00000400018 NPY4RP50391 375 aa9.76□□□□□ -0.85
SKA3-203ENST00000400018 CAPZA1P52907 286 aa9.76□□□□□ -0.85
SKA3-203ENST00000400018 LINC00205P59089 165 aa9.76□□□□□ -0.85
SKA3-203ENST00000400018 FXYD4P59646 89 aa9.76□□□□□ -0.85
SKA3-203ENST00000400018 TMED4Q7Z7H5 227 aa9.76□□□□□ -0.85
SKA3-203ENST00000400018 TMEM185AQ8NFB2 350 aa9.76□□□□□ -0.85
SKA3-203ENST00000400018 COQ8AQ8NI60 647 aa9.76□□□□□ -0.85
SKA3-203ENST00000400018 C2CD4CQ8TF44 421 aa9.76□□□□□ -0.85
SKA3-203ENST00000400018 COQ2Q96H96 371 aa9.76□□□□□ -0.85
SKA3-203ENST00000400018 TECTBQ96PL2 329 aa9.76□□□□□ -0.85
SKA3-203ENST00000400018 FN3KRPQ9HA64 309 aa9.76□□□□□ -0.85
SKA3-203ENST00000400018 NIT2Q9NQR4 276 aa9.76□□□□□ -0.85
SKA3-203ENST00000400018 IL19Q9UHD0 177 aa9.76□□□□□ -0.85
SKA3-203ENST00000400018 POLDIP2Q9Y2S7 368 aa9.76□□□□□ -0.85
SKA3-203ENST00000400018 WIPI2Q9Y4P8 454 aa9.76□□□□□ -0.85
SKA3-203ENST00000400018 SRRM5B3KS81 715 aa9.76□□□□□ -0.85
SKA3-203ENST00000400018 ZNF736B4DX44 427 aaPredicted RBP9.76□□□□□ -0.85
SKA3-203ENST00000400018 CHRM2P08172 466 aa9.76□□□□□ -0.85
SKA3-203ENST00000400018 NHLRC3Q5JS37 347 aa9.76□□□□□ -0.85
SKA3-203ENST00000400018 ZNF787Q6DD87 383 aa9.76□□□□□ -0.85
SKA3-203ENST00000400018 TMEM17Q86X19 198 aa9.76□□□□□ -0.85
SKA3-203ENST00000400018 ZSCAN4Q8NAM6 433 aaPredicted RBP9.76□□□□□ -0.85
SKA3-203ENST00000400018 PTX4Q96A99 478 aa9.76□□□□□ -0.85
SKA3-203ENST00000400018 WDR89Q96FK6 387 aaPredicted RBP9.76□□□□□ -0.85
SKA3-203ENST00000400018 MRI1Q9BV20 369 aa9.76□□□□□ -0.85
SKA3-203ENST00000400018 A0A1W2PPE3 182 aa9.76□□□□□ -0.85
SKA3-203ENST00000400018 ARPC1BO15143 372 aaKnown RBP9.76□□□□□ -0.85
SKA3-203ENST00000400018 AGAP20933 346 aa9.76□□□□□ -0.85
SKA3-203ENST00000400018 ZNF525Q8N782 197 aa9.76□□□□□ -0.85
SKA3-203ENST00000400018 TMEM106BQ9NUM4 274 aa9.76□□□□□ -0.85
SKA3-203ENST00000400018 EHFQ9NZC4 300 aa9.76□□□□□ -0.85
SKA3-203ENST00000400018 OR1A1Q9P1Q5 309 aa9.76□□□□□ -0.85
SKA3-203ENST00000400018 RNF7Q9UBF6 113 aa9.76□□□□□ -0.85
SKA3-203ENST00000400018 GHRLQ9UBU3 117 aa9.76□□□□□ -0.85
SKA3-203ENST00000400018 TEX15Q9BXT5 2789 aa9.75□□□□□ -0.85
SKA3-203ENST00000400018 IGKV1-6A0A0C4DH72 117 aa9.75□□□□□ -0.85
SKA3-203ENST00000400018 IGHV1-69-2A0A0G2JMI3 117 aa9.75□□□□□ -0.85
SKA3-203ENST00000400018 TMEM210A6NLX4 147 aa9.75□□□□□ -0.85
SKA3-203ENST00000400018 B9A039 149 aa9.75□□□□□ -0.85
SKA3-203ENST00000400018 MCRIP1C9JLW8 97 aa9.75□□□□□ -0.85
SKA3-203ENST00000400018 RLN1P04808 185 aa9.75□□□□□ -0.85
SKA3-203ENST00000400018 PAX6P26367 422 aa9.75□□□□□ -0.85
SKA3-203ENST00000400018 KCNJ3P48549 501 aa9.75□□□□□ -0.85
SKA3-203ENST00000400018 HERPUD1Q15011 391 aa9.75□□□□□ -0.85
SKA3-203ENST00000400018 ELP2Q6IA86 826 aa9.75□□□□□ -0.85
SKA3-203ENST00000400018 LIN54Q6MZP7 749 aa9.75□□□□□ -0.85
SKA3-203ENST00000400018 MAPK1IP1LQ8NDC0 245 aa9.75□□□□□ -0.85
SKA3-203ENST00000400018 BVESQ8NE79 360 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms