RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 OR51B2Q9Y5P1 312 aa12.04□□□□□ -0.48
VAPA-202ENST00000400000 PKD1L3Q7Z443 1732 aa12.04□□□□□ -0.48
VAPA-202ENST00000400000 TMPRSS3P57727 454 aa12.04□□□□□ -0.48
VAPA-202ENST00000400000 TMEM52Q8NDY8 209 aa12.04□□□□□ -0.48
VAPA-202ENST00000400000 NUBPLQ8TB37 319 aa12.04□□□□□ -0.48
VAPA-202ENST00000400000 PERPQ96FX8 193 aa12.04□□□□□ -0.48
VAPA-202ENST00000400000 MPC2O95563 127 aa12.04□□□□□ -0.48
VAPA-202ENST00000400000 CCKARP32238 428 aa12.04□□□□□ -0.48
VAPA-202ENST00000400000 ZFP36L2P47974 494 aaKnown RBP12.04□□□□□ -0.48
VAPA-202ENST00000400000 FAM162BQ5T6X4 162 aa12.04□□□□□ -0.48
VAPA-202ENST00000400000 C1orf185Q5T7R7 199 aa12.04□□□□□ -0.48
VAPA-202ENST00000400000 LYZL2Q7Z4W2 148 aa12.04□□□□□ -0.48
VAPA-202ENST00000400000 GSX1Q9H4S2 264 aaPredicted RBP12.04□□□□□ -0.48
VAPA-202ENST00000400000 SIRT7Q9NRC8 400 aa12.04□□□□□ -0.48
VAPA-202ENST00000400000 TCRBV16S1A1N1A0A5B0 115 aa12.04□□□□□ -0.48
VAPA-202ENST00000400000 IGF2P01344 180 aa12.04□□□□□ -0.48
VAPA-202ENST00000400000 ZIC1Q15915 447 aa12.04□□□□□ -0.48
VAPA-202ENST00000400000 CTF1Q16619 201 aa12.04□□□□□ -0.48
VAPA-202ENST00000400000 RSPO4Q2I0M5 234 aaPredicted RBP12.04□□□□□ -0.48
VAPA-202ENST00000400000 LGALSLQ3ZCW2 172 aaPredicted RBP12.04□□□□□ -0.48
VAPA-202ENST00000400000 Q6ZN92 141 aa12.04□□□□□ -0.48
VAPA-202ENST00000400000 SLC26A10Q8NG04 563 aa12.04□□□□□ -0.48
VAPA-202ENST00000400000 C16orf92Q96LL3 132 aa12.04□□□□□ -0.48
VAPA-202ENST00000400000 SGK494Q96LW2 274 aa12.04□□□□□ -0.48
VAPA-202ENST00000400000 AKIP1Q9NQ31 210 aa12.04□□□□□ -0.48
VAPA-202ENST00000400000 NKX2-6A6NCS4 301 aa12.03□□□□□ -0.48
VAPA-202ENST00000400000 PLPP2O43688 288 aa12.03□□□□□ -0.48
VAPA-202ENST00000400000 PAGE4O60829 102 aa12.03□□□□□ -0.48
VAPA-202ENST00000400000 XAF1Q6GPH4 301 aa12.03□□□□□ -0.48
VAPA-202ENST00000400000 NUFIP2Q7Z417 695 aaKnown RBP12.03□□□□□ -0.48
VAPA-202ENST00000400000 ARRDC1Q8N5I2 433 aa12.03□□□□□ -0.48
VAPA-202ENST00000400000 MED30Q96HR3 178 aa12.03□□□□□ -0.48
VAPA-202ENST00000400000 ZNF552Q9H707 407 aaPredicted RBP12.03□□□□□ -0.48
VAPA-202ENST00000400000 PGA3P0DJD8 388 aa12.03□□□□□ -0.48
VAPA-202ENST00000400000 RPL31P62899 125 aaKnown RBP12.03□□□□□ -0.48
VAPA-202ENST00000400000 RPL24P83731 157 aaKnown RBP12.03□□□□□ -0.48
VAPA-202ENST00000400000 MSRB3Q8IXL7 192 aa12.03□□□□□ -0.48
VAPA-202ENST00000400000 OR6X1Q8NH79 312 aa12.03□□□□□ -0.48
VAPA-202ENST00000400000 ZNF502Q8TBZ5 544 aa12.03□□□□□ -0.48
VAPA-202ENST00000400000 CYSLTR2Q9NS75 346 aa12.03□□□□□ -0.48
VAPA-202ENST00000400000 CST4P01036 141 aa12.03□□□□□ -0.48
VAPA-202ENST00000400000 LIFP15018 202 aa12.03□□□□□ -0.48
VAPA-202ENST00000400000 C9orf40Q8IXQ3 194 aa12.03□□□□□ -0.48
VAPA-202ENST00000400000 S4R3C0 116 aa12.03□□□□□ -0.48
VAPA-202ENST00000400000 CENPVL1A0A0U1RR11 272 aa12.03□□□□□ -0.48
VAPA-202ENST00000400000 MRPL24Q96A35 216 aaKnown RBP12.03□□□□□ -0.48
VAPA-202ENST00000400000 ALG14Q96F25 216 aa12.03□□□□□ -0.48
VAPA-202ENST00000400000 ZNF426Q9BUY5 554 aa12.03□□□□□ -0.48
VAPA-202ENST00000400000 ADAMTSL3P82987 1691 aa12.03□□□□□ -0.48
VAPA-202ENST00000400000 RP1L1Q8IWN7 2480 aaPredicted RBP12.03□□□□□ -0.48
VAPA-202ENST00000400000 PMS2CLQ68D20 193 aa12.03□□□□□ -0.48
VAPA-202ENST00000400000 JMJD6Q6NYC1 403 aaPredicted RBP12.03□□□□□ -0.48
VAPA-202ENST00000400000 DOLPP1Q86YN1 238 aa12.03□□□□□ -0.48
VAPA-202ENST00000400000 ZPLD1Q8TCW7 415 aa12.03□□□□□ -0.48
VAPA-202ENST00000400000 EPOPA6NHQ4 379 aa12.03□□□□□ -0.48
VAPA-202ENST00000400000 J3QR89 54 aa12.03□□□□□ -0.48
VAPA-202ENST00000400000 TBX19O60806 448 aa12.03□□□□□ -0.48
VAPA-202ENST00000400000 ZNF324O75467 553 aaPredicted RBP12.03□□□□□ -0.48
VAPA-202ENST00000400000 UPK3AO75631 287 aa12.03□□□□□ -0.48
VAPA-202ENST00000400000 SLC6A1P30531 599 aa12.03□□□□□ -0.48
VAPA-202ENST00000400000 IER3P46695 156 aa12.03□□□□□ -0.48
VAPA-202ENST00000400000 ZDHHC22Q8N966 263 aa12.03□□□□□ -0.48
VAPA-202ENST00000400000 OR1N2Q8NGR9 330 aa12.03□□□□□ -0.48
VAPA-202ENST00000400000 VDAC1P21796 283 aa12.02□□□□□ -0.48
VAPA-202ENST00000400000 OR2V2Q96R30 315 aa12.02□□□□□ -0.48
VAPA-202ENST00000400000 CCL19Q99731 98 aa12.02□□□□□ -0.48
VAPA-202ENST00000400000 IGHV3OR16-13A0A075B7E8 117 aa12.02□□□□□ -0.49
VAPA-202ENST00000400000 IGHV3-74A0A0B4J1X5 117 aa12.02□□□□□ -0.49
VAPA-202ENST00000400000 WDR74Q6RFH5 385 aaPredicted RBP12.02□□□□□ -0.49
VAPA-202ENST00000400000 ZNF738Q8NE65 137 aa12.02□□□□□ -0.49
VAPA-202ENST00000400000 LINC01560Q8TB33 94 aa12.02□□□□□ -0.49
VAPA-202ENST00000400000 EXOGQ9Y2C4 368 aaKnown RBP12.02□□□□□ -0.49
VAPA-202ENST00000400000 PSG6Q00889 435 aa12.02□□□□□ -0.49
VAPA-202ENST00000400000 TM4SF20Q53R12 229 aa12.02□□□□□ -0.49
VAPA-202ENST00000400000 SSX8Q7RTT4 187 aa12.02□□□□□ -0.49
VAPA-202ENST00000400000 SLC52A3Q9NQ40 469 aa12.02□□□□□ -0.49
VAPA-202ENST00000400000 MIA3Q5JRA6 1907 aa12.02□□□□□ -0.49
VAPA-202ENST00000400000 AKAP11Q9UKA4 1901 aa12.02□□□□□ -0.49
VAPA-202ENST00000400000 SIGLEC5O15389 551 aa12.02□□□□□ -0.49
VAPA-202ENST00000400000 ZNF770Q6IQ21 691 aaPredicted RBP12.02□□□□□ -0.49
VAPA-202ENST00000400000 CLEC18BQ6UXF7 455 aa12.02□□□□□ -0.49
VAPA-202ENST00000400000 ABHD1Q96SE0 405 aa12.02□□□□□ -0.49
VAPA-202ENST00000400000 HEXA-AS1Q9H8Q6 139 aa12.02□□□□□ -0.49
VAPA-202ENST00000400000 PPIAL4EA0A075B759 164 aa12.02□□□□□ -0.49
VAPA-202ENST00000400000 PPIAL4DF5H284 164 aa12.02□□□□□ -0.49
VAPA-202ENST00000400000 PPIAL4FP0DN26 164 aa12.02□□□□□ -0.49
VAPA-202ENST00000400000 HIST3H3Q16695 136 aa12.02□□□□□ -0.49
VAPA-202ENST00000400000 OR10C1Q96KK4 312 aa12.02□□□□□ -0.49
VAPA-202ENST00000400000 PPIAL4AQ9Y536 164 aa12.02□□□□□ -0.49
VAPA-202ENST00000400000 KIAA1217Q5T5P2 1943 aa12.02□□□□□ -0.49
VAPA-202ENST00000400000 PRR19A6NJB7 356 aa12.01□□□□□ -0.49
VAPA-202ENST00000400000 PEBP1P30086 187 aaKnown RBP12.01□□□□□ -0.49
VAPA-202ENST00000400000 NMUP48645 174 aa12.01□□□□□ -0.49
VAPA-202ENST00000400000 DLX1P56177 255 aa12.01□□□□□ -0.49
VAPA-202ENST00000400000 KIAA0040Q15053 153 aa12.01□□□□□ -0.49
VAPA-202ENST00000400000 SLC16A13Q7RTY0 426 aa12.01□□□□□ -0.49
VAPA-202ENST00000400000 BVESQ8NE79 360 aa12.01□□□□□ -0.49
VAPA-202ENST00000400000 LRRC3BQ96PB8 259 aa12.01□□□□□ -0.49
VAPA-202ENST00000400000 RCC2Q9P258 522 aaKnown RBP12.01□□□□□ -0.49
VAPA-202ENST00000400000 ZDHHC8Q9ULC8 765 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms