RNA–Protein interactions for RNA: ENST00000399598.6

UBXN2B-201, Transcript of UBX domain protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN2B, Length 5,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN2B-201ENST00000399598 SH2D7A6NKC9 451 aaPredicted RBP13.28□□□□□ -0.28
UBXN2B-201ENST00000399598 MRPL54Q6P161 138 aaKnown RBP13.28□□□□□ -0.28
UBXN2B-201ENST00000399598 ALX4Q9H161 411 aaPredicted RBP13.28□□□□□ -0.28
UBXN2B-201ENST00000399598 UPK3AO75631 287 aa13.28□□□□□ -0.28
UBXN2B-201ENST00000399598 IGHV4-34P06331 123 aa13.28□□□□□ -0.28
UBXN2B-201ENST00000399598 ASAH2BP0C7U1 165 aa13.28□□□□□ -0.28
UBXN2B-201ENST00000399598 IL11P20809 199 aa13.28□□□□□ -0.28
UBXN2B-201ENST00000399598 TMEM50BP56557 158 aa13.28□□□□□ -0.28
UBXN2B-201ENST00000399598 SLC23A3Q6PIS1 610 aa13.28□□□□□ -0.28
UBXN2B-201ENST00000399598 FUT9Q9Y231 359 aa13.28□□□□□ -0.28
UBXN2B-201ENST00000399598 LIMS1P48059 325 aa13.27□□□□□ -0.28
UBXN2B-201ENST00000399598 AESQ08117 197 aa13.27□□□□□ -0.28
UBXN2B-201ENST00000399598 RAB1CQ92928 201 aa13.27□□□□□ -0.28
UBXN2B-201ENST00000399598 OR10C1Q96KK4 312 aa13.27□□□□□ -0.28
UBXN2B-201ENST00000399598 PACRGQ96M98 296 aaPredicted RBP13.27□□□□□ -0.28
UBXN2B-201ENST00000399598 SEC11BP0C7V7 166 aa13.27□□□□□ -0.29
UBXN2B-201ENST00000399598 CXCL2P19875 107 aa13.27□□□□□ -0.29
UBXN2B-201ENST00000399598 GGTLC2Q14390 218 aa13.27□□□□□ -0.29
UBXN2B-201ENST00000399598 MRGPRGQ86SM5 289 aa13.27□□□□□ -0.29
UBXN2B-201ENST00000399598 AMELYQ99218 206 aa13.27□□□□□ -0.29
UBXN2B-201ENST00000399598 SAP30LQ9HAJ7 183 aa13.27□□□□□ -0.29
UBXN2B-201ENST00000399598 ELF5Q9UKW6 265 aaPredicted RBP13.27□□□□□ -0.29
UBXN2B-201ENST00000399598 STRCQ7RTU9 1775 aa13.27□□□□□ -0.29
UBXN2B-201ENST00000399598 A0A0J9YW62 118 aa13.27□□□□□ -0.29
UBXN2B-201ENST00000399598 B2MP61769 119 aa13.27□□□□□ -0.29
UBXN2B-201ENST00000399598 VWA1Q6PCB0 445 aa13.27□□□□□ -0.29
UBXN2B-201ENST00000399598 PARP11Q9NR21 331 aa13.27□□□□□ -0.29
UBXN2B-201ENST00000399598 C5orf67F2Z3F1 127 aa13.27□□□□□ -0.29
UBXN2B-201ENST00000399598 RPL36A-HNRNPH2H7BZ11 118 aa13.27□□□□□ -0.29
UBXN2B-201ENST00000399598 MFNGO00587 321 aa13.27□□□□□ -0.29
UBXN2B-201ENST00000399598 DXOO77932 396 aaKnown RBP13.27□□□□□ -0.29
UBXN2B-201ENST00000399598 FUT5Q11128 374 aa13.27□□□□□ -0.29
UBXN2B-201ENST00000399598 DOPEY2Q9Y3R5 2298 aa13.26□□□□□ -0.29
UBXN2B-201ENST00000399598 M0R2Z0 102 aa13.26□□□□□ -0.29
UBXN2B-201ENST00000399598 PRSS53Q2L4Q9 553 aa13.26□□□□□ -0.29
UBXN2B-201ENST00000399598 ZNF519Q8TB69 540 aa13.26□□□□□ -0.29
UBXN2B-201ENST00000399598 RNF122Q9H9V4 155 aa13.26□□□□□ -0.29
UBXN2B-201ENST00000399598 AMMECR1Q9Y4X0 333 aaPredicted RBP13.26□□□□□ -0.29
UBXN2B-201ENST00000399598 NHSL1Q5SYE7 1610 aa13.26□□□□□ -0.29
UBXN2B-201ENST00000399598 TRIOBPQ9H2D6 2365 aa13.26□□□□□ -0.29
UBXN2B-201ENST00000399598 A0A087X0M5 115 aa13.26□□□□□ -0.29
UBXN2B-201ENST00000399598 A0A1B0GU03 582 aa13.26□□□□□ -0.29
UBXN2B-201ENST00000399598 A0A1B0GX30 115 aa13.26□□□□□ -0.29
UBXN2B-201ENST00000399598 CD3EP07766 207 aa13.26□□□□□ -0.29
UBXN2B-201ENST00000399598 PLPPR5Q32ZL2 321 aa13.26□□□□□ -0.29
UBXN2B-201ENST00000399598 MRPL30Q8TCC3 161 aaKnown RBP13.26□□□□□ -0.29
UBXN2B-201ENST00000399598 ANAPC16Q96DE5 110 aa13.26□□□□□ -0.29
UBXN2B-201ENST00000399598 APELAP0DMC3 54 aa13.26□□□□□ -0.29
UBXN2B-201ENST00000399598 ZNF345Q14585 488 aa13.26□□□□□ -0.29
UBXN2B-201ENST00000399598 Q6ZN92 141 aa13.26□□□□□ -0.29
UBXN2B-201ENST00000399598 LRP11Q86VZ4 500 aa13.26□□□□□ -0.29
UBXN2B-201ENST00000399598 TGIF2LYQ8IUE0 185 aa13.26□□□□□ -0.29
UBXN2B-201ENST00000399598 OR4A4PQ8NGN8 299 aa13.26□□□□□ -0.29
UBXN2B-201ENST00000399598 RNF2Q99496 336 aa13.26□□□□□ -0.29
UBXN2B-201ENST00000399598 OR2J1Q9GZK6 312 aa13.26□□□□□ -0.29
UBXN2B-201ENST00000399598 RNF7Q9UBF6 113 aa13.26□□□□□ -0.29
UBXN2B-201ENST00000399598 CACNA1EQ15878 2313 aa13.26□□□□□ -0.29
UBXN2B-201ENST00000399598 EP300Q09472 2414 aaPredicted RBP13.26□□□□□ -0.29
UBXN2B-201ENST00000399598 ELOA3CA0A087WX78 387 aaPredicted RBP13.26□□□□□ -0.29
UBXN2B-201ENST00000399598 GNG7O60262 68 aa13.26□□□□□ -0.29
UBXN2B-201ENST00000399598 PPP1CCP36873 323 aaKnown RBP13.26□□□□□ -0.29
UBXN2B-201ENST00000399598 RUNX1Q01196 453 aa13.26□□□□□ -0.29
UBXN2B-201ENST00000399598 HLA-DRB5Q30154 266 aa13.26□□□□□ -0.29
UBXN2B-201ENST00000399598 ANKRD55Q3KP44 614 aa13.26□□□□□ -0.29
UBXN2B-201ENST00000399598 C5orf17Q8NAS9 161 aa13.26□□□□□ -0.29
UBXN2B-201ENST00000399598 PTX4Q96A99 478 aa13.26□□□□□ -0.29
UBXN2B-201ENST00000399598 HARBI1Q96MB7 349 aa13.26□□□□□ -0.29
UBXN2B-201ENST00000399598 UFC1Q9Y3C8 167 aa13.26□□□□□ -0.29
UBXN2B-201ENST00000399598 B4DEV8 164 aa13.25□□□□□ -0.29
UBXN2B-201ENST00000399598 CA11O75493 328 aa13.25□□□□□ -0.29
UBXN2B-201ENST00000399598 PRSS1P07477 247 aa13.25□□□□□ -0.29
UBXN2B-201ENST00000399598 DCAF10Q5QP82 559 aa13.25□□□□□ -0.29
UBXN2B-201ENST00000399598 FBXW9Q5XUX1 488 aa13.25□□□□□ -0.29
UBXN2B-201ENST00000399598 HSF4Q9ULV5 492 aa13.25□□□□□ -0.29
UBXN2B-201ENST00000399598 FLYWCH2Q96CP2 140 aaKnown RBP13.25□□□□□ -0.29
UBXN2B-201ENST00000399598 RAB1BQ9H0U4 201 aa13.25□□□□□ -0.29
UBXN2B-201ENST00000399598 CNOT1A5YKK6 2376 aaKnown RBP13.25□□□□□ -0.29
UBXN2B-201ENST00000399598 NPY1RP25929 384 aa13.25□□□□□ -0.29
UBXN2B-201ENST00000399598 COL8A1P27658 744 aa13.25□□□□□ -0.29
UBXN2B-201ENST00000399598 DPPA3Q6W0C5 159 aa13.25□□□□□ -0.29
UBXN2B-201ENST00000399598 MDP1Q86V88 176 aa13.25□□□□□ -0.29
UBXN2B-201ENST00000399598 TPRX1Q8N7U7 411 aa13.25□□□□□ -0.29
UBXN2B-201ENST00000399598 MIOXQ9UGB7 285 aa13.25□□□□□ -0.29
UBXN2B-201ENST00000399598 A0A1W2PPE3 182 aa13.24□□□□□ -0.29
UBXN2B-201ENST00000399598 ZNHIT1O43257 154 aa13.24□□□□□ -0.29
UBXN2B-201ENST00000399598 RBM11P57052 281 aaKnown RBP13.24□□□□□ -0.29
UBXN2B-201ENST00000399598 FAM27BQ5VT28 67 aa13.24□□□□□ -0.29
UBXN2B-201ENST00000399598 LRRC75AQ8NAA5 344 aa13.24□□□□□ -0.29
UBXN2B-201ENST00000399598 SMRP1Q8NCR6 262 aa13.24□□□□□ -0.29
UBXN2B-201ENST00000399598 CLN8Q9UBY8 286 aa13.24□□□□□ -0.29
UBXN2B-201ENST00000399598 PAPPAQ13219 1627 aa13.24□□□□□ -0.29
UBXN2B-201ENST00000399598 DNPH1O43598 174 aa13.24□□□□□ -0.29
UBXN2B-201ENST00000399598 FCGR3AP08637 254 aa13.24□□□□□ -0.29
UBXN2B-201ENST00000399598 ELOBQ15370 118 aa13.24□□□□□ -0.29
UBXN2B-201ENST00000399598 OR4X1Q8NH49 305 aa13.24□□□□□ -0.29
UBXN2B-201ENST00000399598 ZNF501Q96CX3 271 aaPredicted RBP13.24□□□□□ -0.29
UBXN2B-201ENST00000399598 IGHV3OR15-7A0A075B7D8 119 aa13.24□□□□□ -0.29
UBXN2B-201ENST00000399598 C21orf140B9A014 251 aa13.24□□□□□ -0.29
UBXN2B-201ENST00000399598 BMI1P35226 326 aa13.24□□□□□ -0.29
UBXN2B-201ENST00000399598 GRAMD2BQ96HH9 432 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms