RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 ARL11Q969Q4 196 aa20.62■□□□□ 0.89
TSPAN4-207ENST00000397411 NICN1Q9BSH3 213 aa20.62■□□□□ 0.89
TSPAN4-207ENST00000397411 PLEKHJ1Q9NW61 149 aa20.62■□□□□ 0.89
TSPAN4-207ENST00000397411 ZNRD1Q9P1U0 126 aa20.62■□□□□ 0.89
TSPAN4-207ENST00000397411 RAB22AQ9UL26 194 aa20.62■□□□□ 0.89
TSPAN4-207ENST00000397411 IL1AP01583 271 aa20.61■□□□□ 0.89
TSPAN4-207ENST00000397411 CGB3P0DN86 165 aa20.61■□□□□ 0.89
TSPAN4-207ENST00000397411 CGB7P0DN87 165 aa20.61■□□□□ 0.89
TSPAN4-207ENST00000397411 GDNFP39905 211 aa20.61■□□□□ 0.89
TSPAN4-207ENST00000397411 BAIAP2L2Q6UXY1 529 aa20.61■□□□□ 0.89
TSPAN4-207ENST00000397411 LHFPL4Q7Z7J7 247 aa20.61■□□□□ 0.89
TSPAN4-207ENST00000397411 ZNF596Q8TC21 504 aa20.61■□□□□ 0.89
TSPAN4-207ENST00000397411 MALSU1Q96EH3 234 aa20.61■□□□□ 0.89
TSPAN4-207ENST00000397411 FAAP24Q9BTP7 215 aa20.61■□□□□ 0.89
TSPAN4-207ENST00000397411 LPAR5Q9H1C0 372 aa20.61■□□□□ 0.89
TSPAN4-207ENST00000397411 RAB9BQ9NP90 201 aa20.61■□□□□ 0.89
TSPAN4-207ENST00000397411 ODF3BA8MYP8 253 aa20.6■□□□□ 0.89
TSPAN4-207ENST00000397411 CHATP28329 748 aa20.6■□□□□ 0.89
TSPAN4-207ENST00000397411 C6orf183Q5T699 404 aa20.6■□□□□ 0.89
TSPAN4-207ENST00000397411 C6orf201Q7Z4U5 140 aa20.6■□□□□ 0.89
TSPAN4-207ENST00000397411 SSX3Q99909 188 aa20.6■□□□□ 0.89
TSPAN4-207ENST00000397411 CHIAQ9BZP6 476 aa20.6■□□□□ 0.89
TSPAN4-207ENST00000397411 MEGF9Q9H1U4 602 aa20.6■□□□□ 0.89
TSPAN4-207ENST00000397411 KCNIP1Q9NZI2 227 aa20.6■□□□□ 0.89
TSPAN4-207ENST00000397411 NOTOA8MTQ0 251 aa20.59■□□□□ 0.89
TSPAN4-207ENST00000397411 JUNBP17275 347 aaPredicted RBP20.59■□□□□ 0.89
TSPAN4-207ENST00000397411 HTR1DP28221 377 aa20.59■□□□□ 0.89
TSPAN4-207ENST00000397411 SDC2P34741 201 aa20.59■□□□□ 0.89
TSPAN4-207ENST00000397411 SSTR5P35346 364 aa20.59■□□□□ 0.89
TSPAN4-207ENST00000397411 VEGFCP49767 419 aa20.59■□□□□ 0.89
TSPAN4-207ENST00000397411 MXD1Q05195 221 aa20.59■□□□□ 0.89
TSPAN4-207ENST00000397411 FAM189A2Q15884 450 aa20.59■□□□□ 0.89
TSPAN4-207ENST00000397411 SSX2Q16385 188 aa20.59■□□□□ 0.89
TSPAN4-207ENST00000397411 MINOS1Q5TGZ0 78 aa20.59■□□□□ 0.89
TSPAN4-207ENST00000397411 OR10A7Q8NGE5 316 aa20.59■□□□□ 0.89
TSPAN4-207ENST00000397411 OR56B1Q8NGI3 324 aa20.59■□□□□ 0.89
TSPAN4-207ENST00000397411 DYRK2Q92630 601 aa20.59■□□□□ 0.89
TSPAN4-207ENST00000397411 KIRREL1Q96J84 757 aa20.59■□□□□ 0.89
TSPAN4-207ENST00000397411 LIN7BQ9HAP6 207 aa20.59■□□□□ 0.89
TSPAN4-207ENST00000397411 CHMP1AQ9HD42 196 aaPredicted RBP20.59■□□□□ 0.89
TSPAN4-207ENST00000397411 MINOS1-NBL1R4GNA1 71 aa20.59■□□□□ 0.89
TSPAN4-207ENST00000397411 TMEM272A0A1B0GTI8 110 aa20.58■□□□□ 0.89
TSPAN4-207ENST00000397411 SOCS1O15524 211 aa20.58■□□□□ 0.89
TSPAN4-207ENST00000397411 SPINT2O43291 252 aa20.58■□□□□ 0.89
TSPAN4-207ENST00000397411 ORC5O43913 435 aa20.58■□□□□ 0.89
TSPAN4-207ENST00000397411 PAX6P26367 422 aa20.58■□□□□ 0.89
TSPAN4-207ENST00000397411 LRRC75BQ2VPJ9 315 aa20.58■□□□□ 0.89
TSPAN4-207ENST00000397411 PLA1AQ53H76 456 aa20.58■□□□□ 0.89
TSPAN4-207ENST00000397411 TRAT1Q6PIZ9 186 aa20.58■□□□□ 0.89
TSPAN4-207ENST00000397411 GDPGP1Q6ZNW5 385 aa20.58■□□□□ 0.89
TSPAN4-207ENST00000397411 OR5R1Q8NH85 324 aa20.58■□□□□ 0.89
TSPAN4-207ENST00000397411 SPATA3Q8NHX4 192 aa20.58■□□□□ 0.89
TSPAN4-207ENST00000397411 SULT4A1Q9BR01 284 aa20.58■□□□□ 0.89
TSPAN4-207ENST00000397411 RNF167Q9H6Y7 350 aa20.58■□□□□ 0.89
TSPAN4-207ENST00000397411 ZNF286AQ9HBT8 521 aa20.58■□□□□ 0.89
TSPAN4-207ENST00000397411 ABCB10Q9NRK6 738 aa20.58■□□□□ 0.89
TSPAN4-207ENST00000397411 FBLN5Q9UBX5 448 aa20.58■□□□□ 0.89
TSPAN4-207ENST00000397411 HILPDAQ9Y5L2 63 aa20.58■□□□□ 0.89
TSPAN4-207ENST00000397411 COL6A5A8TX70 2615 aa20.58■□□□□ 0.89
TSPAN4-207ENST00000397411 NPIPB11E5RHQ5 1161 aa20.57■□□□□ 0.88
TSPAN4-207ENST00000397411 AIREO43918 545 aa20.57■□□□□ 0.88
TSPAN4-207ENST00000397411 SLC2A2P11168 524 aaPredicted RBP20.57■□□□□ 0.88
TSPAN4-207ENST00000397411 CD34P28906 385 aa20.57■□□□□ 0.88
TSPAN4-207ENST00000397411 Q6ZTK2 550 aa20.57■□□□□ 0.88
TSPAN4-207ENST00000397411 PRR18Q8N4B5 295 aa20.57■□□□□ 0.88
TSPAN4-207ENST00000397411 FAM89BQ8N5H3 189 aa20.57■□□□□ 0.88
TSPAN4-207ENST00000397411 OR9G1Q8NH87 305 aa20.57■□□□□ 0.88
TSPAN4-207ENST00000397411 UBALD1Q8TB05 177 aa20.57■□□□□ 0.88
TSPAN4-207ENST00000397411 CREB3L1Q96BA8 519 aa20.57■□□□□ 0.88
TSPAN4-207ENST00000397411 CENPOQ9BU64 300 aa20.57■□□□□ 0.88
TSPAN4-207ENST00000397411 LINC00574Q9H8X3 128 aa20.57■□□□□ 0.88
TSPAN4-207ENST00000397411 DAPK2Q9UIK4 370 aa20.57■□□□□ 0.88
TSPAN4-207ENST00000397411 FBN1P35555 2871 aaKnown RBP20.57■□□□□ 0.88
TSPAN4-207ENST00000397411 A0A0A6YYD4 124 aa20.56■□□□□ 0.88
TSPAN4-207ENST00000397411 METTL21EPA6NDL7 271 aa20.56■□□□□ 0.88
TSPAN4-207ENST00000397411 FAM181BA6NEQ2 426 aa20.56■□□□□ 0.88
TSPAN4-207ENST00000397411 H3BUX3 64 aa20.56■□□□□ 0.88
TSPAN4-207ENST00000397411 SDCBPO00560 298 aaPredicted RBP20.56■□□□□ 0.88
TSPAN4-207ENST00000397411 IGHV3-7P01780 117 aa20.56■□□□□ 0.88
TSPAN4-207ENST00000397411 SETD6Q8TBK2 473 aa20.56■□□□□ 0.88
TSPAN4-207ENST00000397411 LEAP2Q969E1 77 aa20.56■□□□□ 0.88
TSPAN4-207ENST00000397411 YIPF6Q96EC8 236 aa20.56■□□□□ 0.88
TSPAN4-207ENST00000397411 AJUBAQ96IF1 538 aa20.56■□□□□ 0.88
TSPAN4-207ENST00000397411 DPM3Q9P2X0 92 aa20.56■□□□□ 0.88
TSPAN4-207ENST00000397411 A0A0B4J203 849 aa20.55■□□□□ 0.88
TSPAN4-207ENST00000397411 TRIM64CA6NLI5 447 aa20.55■□□□□ 0.88
TSPAN4-207ENST00000397411 LEUTXA8MZ59 168 aa20.55■□□□□ 0.88
TSPAN4-207ENST00000397411 CEACAM3P40198 252 aa20.55■□□□□ 0.88
TSPAN4-207ENST00000397411 C12orf54Q6X4T0 127 aa20.55■□□□□ 0.88
TSPAN4-207ENST00000397411 SLC16A12Q6ZSM3 486 aa20.55■□□□□ 0.88
TSPAN4-207ENST00000397411 A0A087X0M5 115 aa20.54■□□□□ 0.88
TSPAN4-207ENST00000397411 A0A1B0GX30 115 aa20.54■□□□□ 0.88
TSPAN4-207ENST00000397411 TMEM89A2RUT3 159 aa20.54■□□□□ 0.88
TSPAN4-207ENST00000397411 C15orf65H3BRN8 121 aa20.54■□□□□ 0.88
TSPAN4-207ENST00000397411 LDLRAD4O15165 306 aa20.54■□□□□ 0.88
TSPAN4-207ENST00000397411 GPR137BO60478 399 aa20.54■□□□□ 0.88
TSPAN4-207ENST00000397411 CLEC2LP0C7M8 214 aa20.54■□□□□ 0.88
TSPAN4-207ENST00000397411 HKR1P10072 659 aa20.54■□□□□ 0.88
TSPAN4-207ENST00000397411 RCC1P18754 421 aaPredicted RBP20.54■□□□□ 0.88
TSPAN4-207ENST00000397411 RAB6AP20340 208 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms