RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 RTN4RL2Q86UN3 420 aa17.23■□□□□ 0.35
TSPAN4-206ENST00000397408 OR11H6Q8NGC7 330 aa17.23■□□□□ 0.35
TSPAN4-206ENST00000397408 OR4K15Q8NH41 348 aa17.23■□□□□ 0.35
TSPAN4-206ENST00000397408 KIRREL1Q96J84 757 aa17.23■□□□□ 0.35
TSPAN4-206ENST00000397408 MDFIQ99750 246 aa17.23■□□□□ 0.35
TSPAN4-206ENST00000397408 CLEC7AQ9BXN2 247 aa17.23■□□□□ 0.35
TSPAN4-206ENST00000397408 MRPS26Q9BYN8 205 aaKnown RBP17.23■□□□□ 0.35
TSPAN4-206ENST00000397408 SOCS1O15524 211 aa17.22■□□□□ 0.35
TSPAN4-206ENST00000397408 CA11O75493 328 aa17.22■□□□□ 0.35
TSPAN4-206ENST00000397408 NFYBP25208 207 aa17.22■□□□□ 0.35
TSPAN4-206ENST00000397408 TGFBR1P36897 503 aa17.22■□□□□ 0.35
TSPAN4-206ENST00000397408 LTC4SQ16873 150 aa17.22■□□□□ 0.35
TSPAN4-206ENST00000397408 SFXN4Q6P4A7 337 aa17.22■□□□□ 0.35
TSPAN4-206ENST00000397408 LDLRAD3Q86YD5 345 aa17.22■□□□□ 0.35
TSPAN4-206ENST00000397408 OR13F1Q8NGS4 319 aa17.22■□□□□ 0.35
TSPAN4-206ENST00000397408 RFESDQ8TAC1 157 aa17.22■□□□□ 0.35
TSPAN4-206ENST00000397408 ZFAND2BQ8WV99 257 aa17.22■□□□□ 0.35
TSPAN4-206ENST00000397408 TNFRSF19Q9NS68 423 aa17.22■□□□□ 0.35
TSPAN4-206ENST00000397408 PLEKHJ1Q9NW61 149 aa17.22■□□□□ 0.35
TSPAN4-206ENST00000397408 IDI2-AS1Q9NZ38 188 aa17.22■□□□□ 0.35
TSPAN4-206ENST00000397408 ZNRD1Q9P1U0 126 aa17.22■□□□□ 0.35
TSPAN4-206ENST00000397408 DAPK2Q9UIK4 370 aa17.22■□□□□ 0.35
TSPAN4-206ENST00000397408 RAB22AQ9UL26 194 aa17.22■□□□□ 0.35
TSPAN4-206ENST00000397408 TRAPPC2LQ9UL33 140 aa17.22■□□□□ 0.35
TSPAN4-206ENST00000397408 VEGFCP49767 419 aa17.21■□□□□ 0.35
TSPAN4-206ENST00000397408 EFNB2P52799 333 aa17.21■□□□□ 0.35
TSPAN4-206ENST00000397408 LSM3P62310 102 aaKnown RBP17.21■□□□□ 0.35
TSPAN4-206ENST00000397408 LHFPL4Q7Z7J7 247 aa17.21■□□□□ 0.35
TSPAN4-206ENST00000397408 GAPTQ8N292 157 aa17.21■□□□□ 0.35
TSPAN4-206ENST00000397408 ABHD12Q8N2K0 398 aa17.21■□□□□ 0.35
TSPAN4-206ENST00000397408 FAM89BQ8N5H3 189 aa17.21■□□□□ 0.35
TSPAN4-206ENST00000397408 SSMEM1Q8WWF3 244 aa17.21■□□□□ 0.35
TSPAN4-206ENST00000397408 AJUBAQ96IF1 538 aa17.21■□□□□ 0.35
TSPAN4-206ENST00000397408 FAAP24Q9BTP7 215 aa17.21■□□□□ 0.35
TSPAN4-206ENST00000397408 FUNDC2Q9BWH2 189 aa17.21■□□□□ 0.35
TSPAN4-206ENST00000397408 LINC00574Q9H8X3 128 aa17.21■□□□□ 0.35
TSPAN4-206ENST00000397408 ZMAT3Q9HA38 289 aaKnown RBP17.21■□□□□ 0.35
TSPAN4-206ENST00000397408 NPIPB11E5RHQ5 1161 aa17.21■□□□□ 0.34
TSPAN4-206ENST00000397408 CLDN34H7C241 214 aa17.21■□□□□ 0.34
TSPAN4-206ENST00000397408 GZMHP20718 246 aa17.21■□□□□ 0.34
TSPAN4-206ENST00000397408 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.21■□□□□ 0.34
TSPAN4-206ENST00000397408 OR56B1Q8NGI3 324 aa17.21■□□□□ 0.34
TSPAN4-206ENST00000397408 UBALD1Q8TB05 177 aa17.21■□□□□ 0.34
TSPAN4-206ENST00000397408 ARL11Q969Q4 196 aa17.21■□□□□ 0.34
TSPAN4-206ENST00000397408 C19orf24Q9BVV8 132 aa17.21■□□□□ 0.34
TSPAN4-206ENST00000397408 ZNF286AQ9HBT8 521 aa17.21■□□□□ 0.34
TSPAN4-206ENST00000397408 TBL2Q9Y4P3 447 aaKnown RBP17.21■□□□□ 0.34
TSPAN4-206ENST00000397408 FOXI3A8MTJ6 420 aaPredicted RBP17.2■□□□□ 0.34
TSPAN4-206ENST00000397408 IGHV4-59P01825 116 aa17.2■□□□□ 0.34
TSPAN4-206ENST00000397408 RNASE1P07998 156 aaKnown RBP17.2■□□□□ 0.34
TSPAN4-206ENST00000397408 RAB6AP20340 208 aa17.2■□□□□ 0.34
TSPAN4-206ENST00000397408 PAX6P26367 422 aa17.2■□□□□ 0.34
TSPAN4-206ENST00000397408 CD34P28906 385 aa17.2■□□□□ 0.34
TSPAN4-206ENST00000397408 UTF1Q5T230 341 aa17.2■□□□□ 0.34
TSPAN4-206ENST00000397408 BEND2Q8NDZ0 799 aa17.2■□□□□ 0.34
TSPAN4-206ENST00000397408 MRPL30Q8TCC3 161 aaKnown RBP17.2■□□□□ 0.34
TSPAN4-206ENST00000397408 FAM216AQ8WUB2 273 aa17.2■□□□□ 0.34
TSPAN4-206ENST00000397408 A0A087X0M5 115 aa17.19■□□□□ 0.34
TSPAN4-206ENST00000397408 A0A1B0GX30 115 aa17.19■□□□□ 0.34
TSPAN4-206ENST00000397408 C15orf65H3BRN8 121 aa17.19■□□□□ 0.34
TSPAN4-206ENST00000397408 ORC5O43913 435 aa17.19■□□□□ 0.34
TSPAN4-206ENST00000397408 SNRPBP14678 240 aaKnown RBP17.19■□□□□ 0.34
TSPAN4-206ENST00000397408 RCC1P18754 421 aaPredicted RBP17.19■□□□□ 0.34
TSPAN4-206ENST00000397408 IER3P46695 156 aa17.19■□□□□ 0.34
TSPAN4-206ENST00000397408 LDLRAD2Q5SZI1 272 aa17.19■□□□□ 0.34
TSPAN4-206ENST00000397408 C6orf183Q5T699 404 aa17.19■□□□□ 0.34
TSPAN4-206ENST00000397408 TMEM86BQ8N661 226 aa17.19■□□□□ 0.34
TSPAN4-206ENST00000397408 ARHGAP5-AS1Q96IT6 56 aa17.19■□□□□ 0.34
TSPAN4-206ENST00000397408 HSF4Q9ULV5 492 aa17.19■□□□□ 0.34
TSPAN4-206ENST00000397408 POMT1Q9Y6A1 747 aa17.19■□□□□ 0.34
TSPAN4-206ENST00000397408 C12orf77C9JDV5 145 aa17.18■□□□□ 0.34
TSPAN4-206ENST00000397408 TMEM50BP56557 158 aa17.18■□□□□ 0.34
TSPAN4-206ENST00000397408 Q6ZTK2 550 aa17.18■□□□□ 0.34
TSPAN4-206ENST00000397408 OR10A7Q8NGE5 316 aa17.18■□□□□ 0.34
TSPAN4-206ENST00000397408 OR4P4Q8NGL7 312 aa17.18■□□□□ 0.34
TSPAN4-206ENST00000397408 NDNFQ8TB73 568 aa17.18■□□□□ 0.34
TSPAN4-206ENST00000397408 ZNF596Q8TC21 504 aa17.18■□□□□ 0.34
TSPAN4-206ENST00000397408 LGALS14Q8TCE9 139 aa17.18■□□□□ 0.34
TSPAN4-206ENST00000397408 LEAP2Q969E1 77 aa17.18■□□□□ 0.34
TSPAN4-206ENST00000397408 PTX4Q96A99 478 aa17.18■□□□□ 0.34
TSPAN4-206ENST00000397408 DPAGT1Q9H3H5 408 aa17.18■□□□□ 0.34
TSPAN4-206ENST00000397408 CHMP1AQ9HD42 196 aaPredicted RBP17.18■□□□□ 0.34
TSPAN4-206ENST00000397408 AK3Q9UIJ7 227 aa17.18■□□□□ 0.34
TSPAN4-206ENST00000397408 TOR1AO14656 332 aa17.17■□□□□ 0.34
TSPAN4-206ENST00000397408 IGHV3-7P01780 117 aa17.17■□□□□ 0.34
TSPAN4-206ENST00000397408 ACTG1P63261 375 aa17.17■□□□□ 0.34
TSPAN4-206ENST00000397408 FAM189A2Q15884 450 aa17.17■□□□□ 0.34
TSPAN4-206ENST00000397408 MOGAT2Q3SYC2 334 aa17.17■□□□□ 0.34
TSPAN4-206ENST00000397408 PLAC9Q5JTB6 97 aa17.17■□□□□ 0.34
TSPAN4-206ENST00000397408 IDNKQ5T6J7 187 aa17.17■□□□□ 0.34
TSPAN4-206ENST00000397408 MINOS1Q5TGZ0 78 aa17.17■□□□□ 0.34
TSPAN4-206ENST00000397408 TRAT1Q6PIZ9 186 aa17.17■□□□□ 0.34
TSPAN4-206ENST00000397408 PRR18Q8N4B5 295 aa17.17■□□□□ 0.34
TSPAN4-206ENST00000397408 PECRQ9BY49 303 aa17.17■□□□□ 0.34
TSPAN4-206ENST00000397408 CHIAQ9BZP6 476 aa17.17■□□□□ 0.34
TSPAN4-206ENST00000397408 MBNL3Q9NUK0 354 aaKnown RBP17.17■□□□□ 0.34
TSPAN4-206ENST00000397408 MINOS1-NBL1R4GNA1 71 aa17.17■□□□□ 0.34
TSPAN4-206ENST00000397408 BTBD17A6NE02 478 aa17.16■□□□□ 0.34
TSPAN4-206ENST00000397408 SDCBPO00560 298 aaPredicted RBP17.16■□□□□ 0.34
TSPAN4-206ENST00000397408 SPINT2O43291 252 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms