RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 C7orf77A4D0Y5 90 aa9.16□□□□□ -0.94
COL4A4-201ENST00000396625 SS18L1O75177 396 aaPredicted RBP9.16□□□□□ -0.94
COL4A4-201ENST00000396625 RBM11P57052 281 aaKnown RBP9.16□□□□□ -0.94
COL4A4-201ENST00000396625 HES3Q5TGS1 186 aa9.16□□□□□ -0.94
COL4A4-201ENST00000396625 GFRALQ6UXV0 394 aa9.16□□□□□ -0.94
COL4A4-201ENST00000396625 FAM219AQ8IW50 185 aa9.16□□□□□ -0.94
COL4A4-201ENST00000396625 OR5M9Q8NGP3 310 aa9.16□□□□□ -0.94
COL4A4-201ENST00000396625 RNF133Q8WVZ7 376 aa9.16□□□□□ -0.94
COL4A4-201ENST00000396625 TARM1B6A8C7 271 aa9.16□□□□□ -0.94
COL4A4-201ENST00000396625 C3orf80F5H4A9 247 aa9.16□□□□□ -0.94
COL4A4-201ENST00000396625 RPS4XP62701 263 aaKnown RBP9.16□□□□□ -0.94
COL4A4-201ENST00000396625 STXBP6Q8NFX7 210 aa9.16□□□□□ -0.94
COL4A4-201ENST00000396625 IGF2P01344 180 aa9.16□□□□□ -0.94
COL4A4-201ENST00000396625 CRYBB2P43320 205 aa9.16□□□□□ -0.94
COL4A4-201ENST00000396625 DSCR4P56555 118 aaPredicted RBP9.16□□□□□ -0.94
COL4A4-201ENST00000396625 PDCD1Q15116 288 aa9.16□□□□□ -0.94
COL4A4-201ENST00000396625 CYB561D1Q8N8Q1 229 aa9.16□□□□□ -0.94
COL4A4-201ENST00000396625 ZNF441Q8N8Z8 693 aa9.16□□□□□ -0.94
COL4A4-201ENST00000396625 AQP10Q96PS8 301 aa9.16□□□□□ -0.94
COL4A4-201ENST00000396625 CLEC1BQ9P126 229 aa9.16□□□□□ -0.94
COL4A4-201ENST00000396625 A0A1W2PR80 420 aa9.16□□□□□ -0.94
COL4A4-201ENST00000396625 CKS2P33552 79 aa9.16□□□□□ -0.94
COL4A4-201ENST00000396625 PPICP45877 212 aa9.16□□□□□ -0.94
COL4A4-201ENST00000396625 MRGPRGQ86SM5 289 aa9.16□□□□□ -0.94
COL4A4-201ENST00000396625 OR4X1Q8NH49 305 aa9.16□□□□□ -0.94
COL4A4-201ENST00000396625 RFESDQ8TAC1 157 aa9.16□□□□□ -0.94
COL4A4-201ENST00000396625 TBC1D29Q9UFV1 150 aa9.16□□□□□ -0.94
COL4A4-201ENST00000396625 TCRBV5S2A0A599 114 aa9.16□□□□□ -0.94
COL4A4-201ENST00000396625 ZNF735P0CB33 412 aa9.16□□□□□ -0.94
COL4A4-201ENST00000396625 AGERQ15109 404 aa9.16□□□□□ -0.94
COL4A4-201ENST00000396625 LSM10Q969L4 123 aaKnown RBP9.16□□□□□ -0.94
COL4A4-201ENST00000396625 SLIRPQ9GZT3 109 aaKnown RBP9.16□□□□□ -0.94
COL4A4-201ENST00000396625 GPR27Q9NS67 375 aa9.16□□□□□ -0.94
COL4A4-201ENST00000396625 SLC25A34Q6PIV7 304 aa9.16□□□□□ -0.94
COL4A4-201ENST00000396625 SGMS2Q8NHU3 365 aa9.16□□□□□ -0.94
COL4A4-201ENST00000396625 DLX6P56179 175 aa9.15□□□□□ -0.94
COL4A4-201ENST00000396625 ZNF296Q8WUU4 475 aaPredicted RBP9.15□□□□□ -0.94
COL4A4-201ENST00000396625 MS4A7Q9GZW8 240 aaPredicted RBP9.15□□□□□ -0.94
COL4A4-201ENST00000396625 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.15□□□□□ -0.94
COL4A4-201ENST00000396625 RIMKLAQ8IXN7 391 aa9.15□□□□□ -0.94
COL4A4-201ENST00000396625 OR1K1Q8NGR3 316 aa9.15□□□□□ -0.94
COL4A4-201ENST00000396625 WNT5BQ9H1J7 359 aa9.15□□□□□ -0.94
COL4A4-201ENST00000396625 A0A087WUJ7 227 aa9.15□□□□□ -0.94
COL4A4-201ENST00000396625 LINC01553A4QN01 128 aa9.15□□□□□ -0.94
COL4A4-201ENST00000396625 SOD3P08294 240 aa9.15□□□□□ -0.94
COL4A4-201ENST00000396625 GALP22466 123 aa9.15□□□□□ -0.94
COL4A4-201ENST00000396625 DEFB109BQ30KR1 87 aa9.15□□□□□ -0.94
COL4A4-201ENST00000396625 OR2V1Q8NHB1 315 aa9.15□□□□□ -0.94
COL4A4-201ENST00000396625 DPH3Q96FX2 82 aa9.15□□□□□ -0.94
COL4A4-201ENST00000396625 KCNE3Q9Y6H6 103 aa9.15□□□□□ -0.94
COL4A4-201ENST00000396625 ZBTB42B2RXF5 422 aa9.15□□□□□ -0.94
COL4A4-201ENST00000396625 PITX3O75364 302 aa9.15□□□□□ -0.94
COL4A4-201ENST00000396625 MAS1LP35410 378 aa9.15□□□□□ -0.94
COL4A4-201ENST00000396625 MORN1Q5T089 497 aa9.15□□□□□ -0.94
COL4A4-201ENST00000396625 TMEM207Q6UWW9 146 aa9.15□□□□□ -0.94
COL4A4-201ENST00000396625 LOC285556D6RIA3 1793 aa9.15□□□□□ -0.94
COL4A4-201ENST00000396625 FAM181BA6NEQ2 426 aa9.15□□□□□ -0.94
COL4A4-201ENST00000396625 OTX1P32242 354 aaPredicted RBP9.15□□□□□ -0.94
COL4A4-201ENST00000396625 CAPZBP47756 277 aa9.15□□□□□ -0.94
COL4A4-201ENST00000396625 FOXF1Q12946 379 aa9.15□□□□□ -0.94
COL4A4-201ENST00000396625 WDFY2Q96P53 400 aa9.15□□□□□ -0.94
COL4A4-201ENST00000396625 RAB33BQ9H082 229 aa9.15□□□□□ -0.94
COL4A4-201ENST00000396625 A0A1W2PRD5 423 aa9.15□□□□□ -0.95
COL4A4-201ENST00000396625 A0A1W2PRF3 423 aa9.15□□□□□ -0.95
COL4A4-201ENST00000396625 A0A1W2PRM7 423 aa9.15□□□□□ -0.95
COL4A4-201ENST00000396625 MEX3AA1L020 520 aaKnown RBP9.15□□□□□ -0.95
COL4A4-201ENST00000396625 ZNF98A6NK75 572 aa9.15□□□□□ -0.95
COL4A4-201ENST00000396625 TMPRSS2O15393 492 aa9.15□□□□□ -0.95
COL4A4-201ENST00000396625 SLC25A1P53007 311 aa9.15□□□□□ -0.95
COL4A4-201ENST00000396625 PLPPR5Q32ZL2 321 aa9.15□□□□□ -0.95
COL4A4-201ENST00000396625 HMX2A2RU54 273 aa9.15□□□□□ -0.95
COL4A4-201ENST00000396625 POLR2GP62487 172 aaKnown RBP eCLIP9.15□□□□□ -0.95
COL4A4-201ENST00000396625 PMCHL1Q16048 86 aa9.15□□□□□ -0.95
COL4A4-201ENST00000396625 TEX30Q5JUR7 227 aa9.15□□□□□ -0.95
COL4A4-201ENST00000396625 MARVELD1Q9BSK0 173 aa9.15□□□□□ -0.95
COL4A4-201ENST00000396625 PSMG3Q9BT73 122 aaPredicted RBP9.15□□□□□ -0.95
COL4A4-201ENST00000396625 SMDT1Q9H4I9 107 aa9.15□□□□□ -0.95
COL4A4-201ENST00000396625 NEU3Q9UQ49 428 aa9.15□□□□□ -0.95
COL4A4-201ENST00000396625 ZNF815PA8K554 130 aa9.15□□□□□ -0.95
COL4A4-201ENST00000396625 CDX4O14627 284 aaPredicted RBP9.15□□□□□ -0.95
COL4A4-201ENST00000396625 SUMO3P55854 103 aaPredicted RBP9.15□□□□□ -0.95
COL4A4-201ENST00000396625 TM4SF20Q53R12 229 aa9.15□□□□□ -0.95
COL4A4-201ENST00000396625 SLC26A1Q9H2B4 701 aa9.15□□□□□ -0.95
COL4A4-201ENST00000396625 HIGD1AQ9Y241 93 aa9.15□□□□□ -0.95
COL4A4-201ENST00000396625 NPIPB6E9PJ23 425 aa9.14□□□□□ -0.95
COL4A4-201ENST00000396625 CXCL13O43927 109 aa9.14□□□□□ -0.95
COL4A4-201ENST00000396625 ROM1Q03395 351 aa9.14□□□□□ -0.95
COL4A4-201ENST00000396625 ECSCRQ19T08 205 aa9.14□□□□□ -0.95
COL4A4-201ENST00000396625 RNFT1Q5M7Z0 435 aa9.14□□□□□ -0.95
COL4A4-201ENST00000396625 TCTN3Q6NUS6 607 aa9.14□□□□□ -0.95
COL4A4-201ENST00000396625 H3BMH7 237 aa9.14□□□□□ -0.95
COL4A4-201ENST00000396625 PPM1DO15297 605 aa9.14□□□□□ -0.95
COL4A4-201ENST00000396625 AMY1AP04745 511 aa9.14□□□□□ -0.95
COL4A4-201ENST00000396625 ZNF774Q6NX45 483 aa9.14□□□□□ -0.95
COL4A4-201ENST00000396625 OR13H1Q8NG92 308 aa9.14□□□□□ -0.95
COL4A4-201ENST00000396625 TM4SF19Q96DZ7 209 aa9.14□□□□□ -0.95
COL4A4-201ENST00000396625 FOXJ2Q9P0K8 574 aa9.14□□□□□ -0.95
COL4A4-201ENST00000396625 PHLDA3Q9Y5J5 127 aa9.14□□□□□ -0.95
COL4A4-201ENST00000396625 TMEM95Q3KNT9 176 aa9.14□□□□□ -0.95
COL4A4-201ENST00000396625 WDR38Q5JTN6 314 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms