RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 GSTK1Q9Y2Q3 226 aa4.91□□□□□ -1.62
PTPN20-208ENST00000395727 EXOSC1Q9Y3B2 195 aaKnown RBP4.91□□□□□ -1.62
PTPN20-208ENST00000395727 TRBV5-5A0A0J9YX44 114 aa4.9□□□□□ -1.63
PTPN20-208ENST00000395727 KBTBD11-OT1A0A1B0GTJ5 212 aa4.9□□□□□ -1.63
PTPN20-208ENST00000395727 LEUTXA8MZ59 168 aa4.9□□□□□ -1.63
PTPN20-208ENST00000395727 NPIPB11E5RHQ5 1161 aa4.9□□□□□ -1.63
PTPN20-208ENST00000395727 H0YJX3 145 aa4.9□□□□□ -1.63
PTPN20-208ENST00000395727 LY6LH3BQJ8 138 aa4.9□□□□□ -1.63
PTPN20-208ENST00000395727 M0QZK8 103 aa4.9□□□□□ -1.63
PTPN20-208ENST00000395727 SIRPB1O00241 398 aa4.9□□□□□ -1.63
PTPN20-208ENST00000395727 CASQ2O14958 399 aaPredicted RBP4.9□□□□□ -1.63
PTPN20-208ENST00000395727 MAGEB3O15480 346 aa4.9□□□□□ -1.63
PTPN20-208ENST00000395727 ZNF780AO75290 641 aaPredicted RBP4.9□□□□□ -1.63
PTPN20-208ENST00000395727 TUSC2O75896 110 aa4.9□□□□□ -1.63
PTPN20-208ENST00000395727 SPDEFO95238 335 aa4.9□□□□□ -1.63
PTPN20-208ENST00000395727 OPN1MWP04001 364 aa4.9□□□□□ -1.63
PTPN20-208ENST00000395727 HCKP08631 526 aa4.9□□□□□ -1.63
PTPN20-208ENST00000395727 CSF1P09603 554 aa4.9□□□□□ -1.63
PTPN20-208ENST00000395727 OPN1MW2P0DN77 364 aa4.9□□□□□ -1.63
PTPN20-208ENST00000395727 OPN1MW3P0DN78 364 aa4.9□□□□□ -1.63
PTPN20-208ENST00000395727 ZNF44P15621 663 aa4.9□□□□□ -1.63
PTPN20-208ENST00000395727 IGFBP3P17936 291 aaPredicted RBP4.9□□□□□ -1.63
PTPN20-208ENST00000395727 CDK2P24941 298 aa4.9□□□□□ -1.63
PTPN20-208ENST00000395727 DUSP1P28562 367 aa4.9□□□□□ -1.63
PTPN20-208ENST00000395727 BRS3P32247 399 aa4.9□□□□□ -1.63
PTPN20-208ENST00000395727 GLIPR1P48060 266 aa4.9□□□□□ -1.63
PTPN20-208ENST00000395727 ETV1P50549 477 aa4.9□□□□□ -1.63
PTPN20-208ENST00000395727 TAS2R43P59537 309 aa4.9□□□□□ -1.63
PTPN20-208ENST00000395727 ADARB1P78563 741 aaKnown RBP4.9□□□□□ -1.63
PTPN20-208ENST00000395727 DEFA6Q01524 100 aa4.9□□□□□ -1.63
PTPN20-208ENST00000395727 AESQ08117 197 aa4.9□□□□□ -1.63
PTPN20-208ENST00000395727 MED21Q13503 144 aa4.9□□□□□ -1.63
PTPN20-208ENST00000395727 FAM189A2Q15884 450 aa4.9□□□□□ -1.63
PTPN20-208ENST00000395727 LY6EQ16553 131 aa4.9□□□□□ -1.63
PTPN20-208ENST00000395727 MPV17LQ2QL34 196 aa4.9□□□□□ -1.63
PTPN20-208ENST00000395727 TMEM30BQ3MIR4 351 aa4.9□□□□□ -1.63
PTPN20-208ENST00000395727 Q3ZCU0 254 aa4.9□□□□□ -1.63
PTPN20-208ENST00000395727 Q499Y3 187 aa4.9□□□□□ -1.63
PTPN20-208ENST00000395727 YIF1BQ5BJH7 314 aa4.9□□□□□ -1.63
PTPN20-208ENST00000395727 DMKNQ6E0U4 476 aaPredicted RBP4.9□□□□□ -1.63
PTPN20-208ENST00000395727 XAF1Q6GPH4 301 aa4.9□□□□□ -1.63
PTPN20-208ENST00000395727 CCDC144NLQ6NUI1 221 aa4.9□□□□□ -1.63
PTPN20-208ENST00000395727 OVCH2Q7RTZ1 564 aa4.9□□□□□ -1.63
PTPN20-208ENST00000395727 TRAPPC6BQ86SZ2 158 aa4.9□□□□□ -1.63
PTPN20-208ENST00000395727 NDUFA11Q86Y39 141 aa4.9□□□□□ -1.63
PTPN20-208ENST00000395727 TPRX1Q8N7U7 411 aa4.9□□□□□ -1.63
PTPN20-208ENST00000395727 ZNF565Q8N9K5 539 aa4.9□□□□□ -1.63
PTPN20-208ENST00000395727 OR4D6Q8NGJ1 314 aa4.9□□□□□ -1.63
PTPN20-208ENST00000395727 OR51A2Q8NGJ7 313 aa4.9□□□□□ -1.63
PTPN20-208ENST00000395727 OR5D18Q8NGL1 313 aa4.9□□□□□ -1.63
PTPN20-208ENST00000395727 OR9G1Q8NH87 305 aa4.9□□□□□ -1.63
PTPN20-208ENST00000395727 CNIH3Q8TBE1 160 aa4.9□□□□□ -1.63
PTPN20-208ENST00000395727 THRSPQ92748 146 aa4.9□□□□□ -1.63
PTPN20-208ENST00000395727 STMN2Q93045 179 aa4.9□□□□□ -1.63
PTPN20-208ENST00000395727 RFT1Q96AA3 541 aa4.9□□□□□ -1.63
PTPN20-208ENST00000395727 MRPS24Q96EL2 167 aaKnown RBP4.9□□□□□ -1.63
PTPN20-208ENST00000395727 SPACA5Q96QH8 159 aa4.9□□□□□ -1.63
PTPN20-208ENST00000395727 KRTAP4-11Q9BYQ6 195 aa4.9□□□□□ -1.63
PTPN20-208ENST00000395727 AMBNQ9NP70 447 aa4.9□□□□□ -1.63
PTPN20-208ENST00000395727 TMEM138Q9NPI0 162 aa4.9□□□□□ -1.63
PTPN20-208ENST00000395727 PLCXD1Q9NUJ7 323 aa4.9□□□□□ -1.63
PTPN20-208ENST00000395727 PAK1IP1Q9NWT1 392 aaPredicted RBP4.9□□□□□ -1.63
PTPN20-208ENST00000395727 BABAM2Q9NXR7 383 aa4.9□□□□□ -1.63
PTPN20-208ENST00000395727 CNOT2Q9NZN8 540 aaKnown RBP4.9□□□□□ -1.63
PTPN20-208ENST00000395727 AASSQ9UDR5 926 aa4.9□□□□□ -1.63
PTPN20-208ENST00000395727 AMMECR1Q9Y4X0 333 aaPredicted RBP4.9□□□□□ -1.63
PTPN20-208ENST00000395727 TET2Q6N021 2002 aaPredicted RBP4.9□□□□□ -1.63
PTPN20-208ENST00000395727 TRAV24A0A0B4J272 114 aa4.89□□□□□ -1.63
PTPN20-208ENST00000395727 FAM90A18PA6NE21 464 aa4.89□□□□□ -1.63
PTPN20-208ENST00000395727 FAM90A16PA6NEW6 464 aa4.89□□□□□ -1.63
PTPN20-208ENST00000395727 FAM90A20PA6NIJ5 464 aa4.89□□□□□ -1.63
PTPN20-208ENST00000395727 FAM90A9PA6NNJ1 464 aa4.89□□□□□ -1.63
PTPN20-208ENST00000395727 ZNF785A8K8V0 405 aa4.89□□□□□ -1.63
PTPN20-208ENST00000395727 FAM90A12PA8MX19 464 aa4.89□□□□□ -1.63
PTPN20-208ENST00000395727 FAM90A5PA8MXJ8 464 aa4.89□□□□□ -1.63
PTPN20-208ENST00000395727 BUB1B-PAK6H3BSN5 160 aa4.89□□□□□ -1.63
PTPN20-208ENST00000395727 DEGS1O15121 323 aa4.89□□□□□ -1.63
PTPN20-208ENST00000395727 MMP23AO75900 390 aa4.89□□□□□ -1.63
PTPN20-208ENST00000395727 OR2F2O95006 317 aa4.89□□□□□ -1.63
PTPN20-208ENST00000395727 IL1AP01583 271 aa4.89□□□□□ -1.63
PTPN20-208ENST00000395727 FAM90A15PP0C7V4 464 aa4.89□□□□□ -1.63
PTPN20-208ENST00000395727 FAM90A13PP0C7W8 464 aa4.89□□□□□ -1.63
PTPN20-208ENST00000395727 FAM90A14PP0C7W9 464 aa4.89□□□□□ -1.63
PTPN20-208ENST00000395727 FAM90A24PP0C7X0 464 aa4.89□□□□□ -1.63
PTPN20-208ENST00000395727 TMEM225BP0DP42 221 aa4.89□□□□□ -1.63
PTPN20-208ENST00000395727 MYL12AP19105 171 aa4.89□□□□□ -1.63
PTPN20-208ENST00000395727 PAX6P26367 422 aa4.89□□□□□ -1.63
PTPN20-208ENST00000395727 RAB7AP51149 207 aa4.89□□□□□ -1.63
PTPN20-208ENST00000395727 GTF2A1P52655 376 aaPredicted RBP4.89□□□□□ -1.63
PTPN20-208ENST00000395727 PRRX1P54821 245 aa4.89□□□□□ -1.63
PTPN20-208ENST00000395727 RBM11P57052 281 aaKnown RBP4.89□□□□□ -1.63
PTPN20-208ENST00000395727 RPS11P62280 158 aaKnown RBP eCLIP4.89□□□□□ -1.63
PTPN20-208ENST00000395727 PPP3R1P63098 170 aa4.89□□□□□ -1.63
PTPN20-208ENST00000395727 EMX1Q04741 257 aaPredicted RBP4.89□□□□□ -1.63
PTPN20-208ENST00000395727 SLC34A1Q06495 639 aa4.89□□□□□ -1.63
PTPN20-208ENST00000395727 DYNC1I2Q13409 638 aaKnown RBP4.89□□□□□ -1.63
PTPN20-208ENST00000395727 GPR176Q14439 515 aa4.89□□□□□ -1.63
PTPN20-208ENST00000395727 HABP2Q14520 560 aaPredicted RBP4.89□□□□□ -1.63
PTPN20-208ENST00000395727 SMN1Q16637 294 aaKnown RBP4.89□□□□□ -1.63
PTPN20-208ENST00000395727 C17orf58Q2M2W7 97 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms