RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 SUCNR1Q9BXA5 334 aa11.87□□□□□ -0.51
SNCA-204ENST00000394989 TRAV17A0A0B4J275 112 aa11.87□□□□□ -0.51
SNCA-204ENST00000394989 HS3ST1O14792 307 aa11.87□□□□□ -0.51
SNCA-204ENST00000394989 FGF16O43320 207 aa11.87□□□□□ -0.51
SNCA-204ENST00000394989 HERV-K104P61576 105 aa11.87□□□□□ -0.51
SNCA-204ENST00000394989 PPP1CBP62140 327 aa11.87□□□□□ -0.51
SNCA-204ENST00000394989 FAM58AQ8N1B3 248 aa11.87□□□□□ -0.51
SNCA-204ENST00000394989 TAAR6Q96RI8 345 aa11.87□□□□□ -0.51
SNCA-204ENST00000394989 PKIBQ9C010 78 aa11.87□□□□□ -0.51
SNCA-204ENST00000394989 FAM86C1Q9NVL1 165 aa11.87□□□□□ -0.51
SNCA-204ENST00000394989 CACNA1GO43497 2377 aa11.87□□□□□ -0.51
SNCA-204ENST00000394989 ZFHX2Q9C0A1 2572 aaPredicted RBP11.87□□□□□ -0.51
SNCA-204ENST00000394989 IGKV1D-13A0A0B4J2D9 117 aa11.87□□□□□ -0.51
SNCA-204ENST00000394989 RNASEK-C17orf49H0YIS7 233 aa11.87□□□□□ -0.51
SNCA-204ENST00000394989 IFNA21P01568 189 aa11.87□□□□□ -0.51
SNCA-204ENST00000394989 MBPP02686 304 aaPredicted RBP11.87□□□□□ -0.51
SNCA-204ENST00000394989 IGKV1-13P0DP09 117 aa11.87□□□□□ -0.51
SNCA-204ENST00000394989 TGFBR3Q03167 851 aa11.87□□□□□ -0.51
SNCA-204ENST00000394989 FOXF2Q12947 444 aa11.87□□□□□ -0.51
SNCA-204ENST00000394989 CNEP1R1Q8N9A8 125 aa11.87□□□□□ -0.51
SNCA-204ENST00000394989 NEK7Q8TDX7 302 aa11.87□□□□□ -0.51
SNCA-204ENST00000394989 RDH5Q92781 318 aa11.87□□□□□ -0.51
SNCA-204ENST00000394989 TMEM100Q9NV29 134 aa11.87□□□□□ -0.51
SNCA-204ENST00000394989 ATP23Q9Y6H3 246 aa11.87□□□□□ -0.51
SNCA-204ENST00000394989 PHF1O43189 567 aaPredicted RBP11.86□□□□□ -0.51
SNCA-204ENST00000394989 UBE2NP61088 152 aaKnown RBP11.86□□□□□ -0.51
SNCA-204ENST00000394989 ZNF818PQ6ZRF7 136 aa11.86□□□□□ -0.51
SNCA-204ENST00000394989 LINC00596Q86U02 117 aa11.86□□□□□ -0.51
SNCA-204ENST00000394989 OR52M1Q8NGK5 317 aa11.86□□□□□ -0.51
SNCA-204ENST00000394989 HIST1H2BAQ96A08 127 aa11.86□□□□□ -0.51
SNCA-204ENST00000394989 GPHA2Q96T91 129 aa11.86□□□□□ -0.51
SNCA-204ENST00000394989 PLK3Q9H4B4 646 aa11.86□□□□□ -0.51
SNCA-204ENST00000394989 C5orf52A6NGY3 159 aa11.86□□□□□ -0.51
SNCA-204ENST00000394989 H7C1Q1 480 aa11.86□□□□□ -0.51
SNCA-204ENST00000394989 J3QW42 95 aa11.86□□□□□ -0.51
SNCA-204ENST00000394989 FAM157CP0CG43 387 aa11.86□□□□□ -0.51
SNCA-204ENST00000394989 SMIM6P0DI80 62 aa11.86□□□□□ -0.51
SNCA-204ENST00000394989 PJVKQ0ZLH3 352 aa11.86□□□□□ -0.51
SNCA-204ENST00000394989 OR2B11Q5JQS5 317 aa11.86□□□□□ -0.51
SNCA-204ENST00000394989 SYT3Q9BQG1 590 aa11.86□□□□□ -0.51
SNCA-204ENST00000394989 OR51M1Q9H341 326 aa11.86□□□□□ -0.51
SNCA-204ENST00000394989 AMDHD2Q9Y303 409 aa11.86□□□□□ -0.51
SNCA-204ENST00000394989 LSM5Q9Y4Y9 91 aaKnown RBP11.86□□□□□ -0.51
SNCA-204ENST00000394989 PRR14LQ5THK1 2151 aa11.86□□□□□ -0.51
SNCA-204ENST00000394989 A0A1B0GV90 55 aa11.85□□□□□ -0.51
SNCA-204ENST00000394989 TRDCB7Z8K6 153 aa11.85□□□□□ -0.51
SNCA-204ENST00000394989 MPPED1O15442 326 aa11.85□□□□□ -0.51
SNCA-204ENST00000394989 CEACAM4O75871 244 aa11.85□□□□□ -0.51
SNCA-204ENST00000394989 TUSC2O75896 110 aa11.85□□□□□ -0.51
SNCA-204ENST00000394989 SCGB1D2O95969 90 aa11.85□□□□□ -0.51
SNCA-204ENST00000394989 FOSL1P15407 271 aa11.85□□□□□ -0.51
SNCA-204ENST00000394989 PCSK4Q6UW60 755 aa11.85□□□□□ -0.51
SNCA-204ENST00000394989 SLC25A40Q8TBP6 338 aa11.85□□□□□ -0.51
SNCA-204ENST00000394989 PRRX2Q99811 253 aa11.85□□□□□ -0.51
SNCA-204ENST00000394989 DLL3Q9NYJ7 618 aa11.85□□□□□ -0.51
SNCA-204ENST00000394989 DMXL2Q8TDJ6 3036 aa11.85□□□□□ -0.51
SNCA-204ENST00000394989 C3orf85A0A1B0GTC6 90 aa11.85□□□□□ -0.51
SNCA-204ENST00000394989 J3QT63 122 aa11.85□□□□□ -0.51
SNCA-204ENST00000394989 TK1P04183 234 aa11.85□□□□□ -0.51
SNCA-204ENST00000394989 RPL12P30050 165 aaKnown RBP11.85□□□□□ -0.51
SNCA-204ENST00000394989 LPAR6P43657 344 aa11.85□□□□□ -0.51
SNCA-204ENST00000394989 IL13RA2Q14627 380 aa11.85□□□□□ -0.51
SNCA-204ENST00000394989 RPL7L1Q6DKI1 246 aaKnown RBP11.85□□□□□ -0.51
SNCA-204ENST00000394989 Q6P435 159 aa11.85□□□□□ -0.51
SNCA-204ENST00000394989 SLC35G3Q8N808 338 aa11.85□□□□□ -0.51
SNCA-204ENST00000394989 SCCPDHQ8NBX0 429 aa11.85□□□□□ -0.51
SNCA-204ENST00000394989 CD300LFQ8TDQ1 290 aa11.85□□□□□ -0.51
SNCA-204ENST00000394989 GTF3AQ92664 365 aaKnown RBP11.85□□□□□ -0.51
SNCA-204ENST00000394989 SEC11CQ9BY50 192 aa11.85□□□□□ -0.51
SNCA-204ENST00000394989 SMCO4Q9NRQ5 59 aa11.85□□□□□ -0.51
SNCA-204ENST00000394989 DKK4Q9UBT3 224 aa11.85□□□□□ -0.51
SNCA-204ENST00000394989 IGHV3-64DA0A0J9YX35 117 aa11.85□□□□□ -0.51
SNCA-204ENST00000394989 K7EPK0 472 aa11.85□□□□□ -0.51
SNCA-204ENST00000394989 AGFG2O95081 481 aa11.85□□□□□ -0.51
SNCA-204ENST00000394989 DIRAS3O95661 229 aa11.85□□□□□ -0.51
SNCA-204ENST00000394989 SELEP16581 610 aa11.85□□□□□ -0.51
SNCA-204ENST00000394989 COX5AP20674 150 aa11.85□□□□□ -0.51
SNCA-204ENST00000394989 S100PP25815 95 aa11.85□□□□□ -0.51
SNCA-204ENST00000394989 UCP2P55851 309 aa11.85□□□□□ -0.51
SNCA-204ENST00000394989 PSG7Q13046 419 aa11.85□□□□□ -0.51
SNCA-204ENST00000394989 FAM71E2Q8N5Q1 922 aa11.85□□□□□ -0.51
SNCA-204ENST00000394989 WDR31Q8NA23 367 aa11.85□□□□□ -0.51
SNCA-204ENST00000394989 CDH20Q9HBT6 801 aa11.85□□□□□ -0.51
SNCA-204ENST00000394989 H0YL77 283 aa11.84□□□□□ -0.51
SNCA-204ENST00000394989 IGKV3-15P01624 115 aa11.84□□□□□ -0.51
SNCA-204ENST00000394989 MPV17P39210 176 aa11.84□□□□□ -0.51
SNCA-204ENST00000394989 ERVK11-1P61568 191 aa11.84□□□□□ -0.51
SNCA-204ENST00000394989 ZNF154Q13106 437 aa11.84□□□□□ -0.51
SNCA-204ENST00000394989 ZNF880Q6PDB4 577 aa11.84□□□□□ -0.51
SNCA-204ENST00000394989 INO80CQ6PI98 192 aaPredicted RBP11.84□□□□□ -0.51
SNCA-204ENST00000394989 TBC1D26Q86UD7 250 aa11.84□□□□□ -0.51
SNCA-204ENST00000394989 CCDC71LQ8N9Z2 235 aa11.84□□□□□ -0.51
SNCA-204ENST00000394989 RTL8AQ9BWD3 113 aa11.84□□□□□ -0.51
SNCA-204ENST00000394989 SPACA1Q9HBV2 294 aa11.84□□□□□ -0.51
SNCA-204ENST00000394989 SMG1Q96Q15 3661 aaKnown RBP11.84□□□□□ -0.51
SNCA-204ENST00000394989 KIR2DS1A0A191URI9 304 aa11.84□□□□□ -0.51
SNCA-204ENST00000394989 A0A1W2PPE2 198 aa11.84□□□□□ -0.51
SNCA-204ENST00000394989 S100A8P05109 93 aa11.84□□□□□ -0.51
SNCA-204ENST00000394989 KIR2DS4P43632 304 aa11.84□□□□□ -0.51
SNCA-204ENST00000394989 NUBP1P53384 320 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms