RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 CD40P25942 277 aa9.07□□□□□ -0.96
COL4A6-203ENST00000394872 COL13A1Q5TAT6 717 aaPredicted RBP9.07□□□□□ -0.96
COL4A6-203ENST00000394872 NSUN5P2Q63ZY6 315 aa9.07□□□□□ -0.96
COL4A6-203ENST00000394872 ZNF714Q96N38 554 aa9.07□□□□□ -0.96
COL4A6-203ENST00000394872 HILPDAQ9Y5L2 63 aa9.07□□□□□ -0.96
COL4A6-203ENST00000394872 SHANK3Q9BYB0 1731 aa9.07□□□□□ -0.96
COL4A6-203ENST00000394872 RNF224P0DH78 156 aa9.07□□□□□ -0.96
COL4A6-203ENST00000394872 HIST1H1EP10412 219 aaKnown RBP9.07□□□□□ -0.96
COL4A6-203ENST00000394872 AREGP15514 252 aa9.07□□□□□ -0.96
COL4A6-203ENST00000394872 IQCJQ1A5X6 159 aa9.07□□□□□ -0.96
COL4A6-203ENST00000394872 TEX30Q5JUR7 227 aa9.07□□□□□ -0.96
COL4A6-203ENST00000394872 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.07□□□□□ -0.96
COL4A6-203ENST00000394872 OR1L8Q8NGR8 309 aa9.07□□□□□ -0.96
COL4A6-203ENST00000394872 MRGPRFQ96AM1 343 aa9.07□□□□□ -0.96
COL4A6-203ENST00000394872 NPAS1Q99742 590 aa9.07□□□□□ -0.96
COL4A6-203ENST00000394872 OR2W1Q9Y3N9 320 aa9.07□□□□□ -0.96
COL4A6-203ENST00000394872 DAOP14920 347 aa9.07□□□□□ -0.96
COL4A6-203ENST00000394872 ERVS71-1P61550 626 aa9.07□□□□□ -0.96
COL4A6-203ENST00000394872 SURF2Q15527 256 aaPredicted RBP9.07□□□□□ -0.96
COL4A6-203ENST00000394872 CCL13Q99616 98 aa9.07□□□□□ -0.96
COL4A6-203ENST00000394872 SF3B6Q9Y3B4 125 aaKnown RBP9.07□□□□□ -0.96
COL4A6-203ENST00000394872 OR51B2Q9Y5P1 312 aa9.07□□□□□ -0.96
COL4A6-203ENST00000394872 ATG2BQ96BY7 2078 aa9.07□□□□□ -0.96
COL4A6-203ENST00000394872 CNTRLQ7Z7A1 2325 aa9.07□□□□□ -0.96
COL4A6-203ENST00000394872 A0A0J9YW62 118 aa9.07□□□□□ -0.96
COL4A6-203ENST00000394872 CCKARP32238 428 aa9.07□□□□□ -0.96
COL4A6-203ENST00000394872 ANKRD55Q3KP44 614 aa9.07□□□□□ -0.96
COL4A6-203ENST00000394872 ZNF658BQ4V348 819 aaPredicted RBP9.07□□□□□ -0.96
COL4A6-203ENST00000394872 FAM214BQ7L5A3 538 aa9.07□□□□□ -0.96
COL4A6-203ENST00000394872 ZNF426Q9BUY5 554 aa9.07□□□□□ -0.96
COL4A6-203ENST00000394872 PARP11Q9NR21 331 aa9.07□□□□□ -0.96
COL4A6-203ENST00000394872 AHRRA9YTQ3 701 aa9.07□□□□□ -0.96
COL4A6-203ENST00000394872 CTDSPLO15194 276 aa9.07□□□□□ -0.96
COL4A6-203ENST00000394872 CLDN14O95500 239 aa9.07□□□□□ -0.96
COL4A6-203ENST00000394872 P01737 135 aa9.07□□□□□ -0.96
COL4A6-203ENST00000394872 UCP2P55851 309 aa9.07□□□□□ -0.96
COL4A6-203ENST00000394872 VWA1Q6PCB0 445 aa9.07□□□□□ -0.96
COL4A6-203ENST00000394872 C16orf82Q7Z2V1 217 aa9.07□□□□□ -0.96
COL4A6-203ENST00000394872 SLC25A42Q86VD7 318 aa9.07□□□□□ -0.96
COL4A6-203ENST00000394872 FAM222BQ8WU58 562 aa9.07□□□□□ -0.96
COL4A6-203ENST00000394872 RNF133Q8WVZ7 376 aa9.07□□□□□ -0.96
COL4A6-203ENST00000394872 ZNF488Q96MN9 340 aa9.07□□□□□ -0.96
COL4A6-203ENST00000394872 PIMREGQ9BSJ6 248 aa9.07□□□□□ -0.96
COL4A6-203ENST00000394872 SEC11CQ9BY50 192 aa9.07□□□□□ -0.96
COL4A6-203ENST00000394872 ZNF552Q9H707 407 aaPredicted RBP9.07□□□□□ -0.96
COL4A6-203ENST00000394872 PILRBQ9UKJ0 227 aa9.07□□□□□ -0.96
COL4A6-203ENST00000394872 C1orf174Q8IYL3 243 aa9.07□□□□□ -0.96
COL4A6-203ENST00000394872 ABHD1Q96SE0 405 aa9.07□□□□□ -0.96
COL4A6-203ENST00000394872 CHST5Q9GZS9 411 aa9.07□□□□□ -0.96
COL4A6-203ENST00000394872 RBFOX3A6NFN3 312 aa9.06□□□□□ -0.96
COL4A6-203ENST00000394872 PRR33A8MZF0 331 aa9.06□□□□□ -0.96
COL4A6-203ENST00000394872 STARD6P59095 220 aa9.06□□□□□ -0.96
COL4A6-203ENST00000394872 AP5S1Q9NUS5 200 aa9.06□□□□□ -0.96
COL4A6-203ENST00000394872 NAT8Q9UHE5 227 aa9.06□□□□□ -0.96
COL4A6-203ENST00000394872 FOCADQ5VW36 1801 aa9.06□□□□□ -0.96
COL4A6-203ENST00000394872 IGSF23A1L1A6 192 aa9.06□□□□□ -0.96
COL4A6-203ENST00000394872 C11orf94C9JXX5 98 aa9.06□□□□□ -0.96
COL4A6-203ENST00000394872 PRSS1P07477 247 aa9.06□□□□□ -0.96
COL4A6-203ENST00000394872 CSN3P07498 182 aa9.06□□□□□ -0.96
COL4A6-203ENST00000394872 IL11P20809 199 aa9.06□□□□□ -0.96
COL4A6-203ENST00000394872 OR2V2Q96R30 315 aa9.06□□□□□ -0.96
COL4A6-203ENST00000394872 CISD1Q9NZ45 108 aaKnown RBP9.06□□□□□ -0.96
COL4A6-203ENST00000394872 DUXBA0A1W2PPF3 345 aa9.06□□□□□ -0.96
COL4A6-203ENST00000394872 IGKV1D-16P01601 117 aa9.06□□□□□ -0.96
COL4A6-203ENST00000394872 KHDC3LQ587J8 217 aa9.06□□□□□ -0.96
COL4A6-203ENST00000394872 STARD4Q96DR4 205 aa9.06□□□□□ -0.96
COL4A6-203ENST00000394872 K7N7A8 449 aa9.06□□□□□ -0.96
COL4A6-203ENST00000394872 PSG2P11465 335 aa9.06□□□□□ -0.96
COL4A6-203ENST00000394872 PPP1CCP36873 323 aaKnown RBP9.06□□□□□ -0.96
COL4A6-203ENST00000394872 SLC35B1P78383 322 aa9.06□□□□□ -0.96
COL4A6-203ENST00000394872 ZBTB34Q8NCN2 500 aa9.06□□□□□ -0.96
COL4A6-203ENST00000394872 RGS13O14921 159 aa9.06□□□□□ -0.96
COL4A6-203ENST00000394872 MGAT2Q10469 447 aa9.06□□□□□ -0.96
COL4A6-203ENST00000394872 SIGIRRQ6IA17 410 aa9.06□□□□□ -0.96
COL4A6-203ENST00000394872 FAM210BQ96KR6 192 aa9.06□□□□□ -0.96
COL4A6-203ENST00000394872 SRD5A3Q9H8P0 318 aa9.06□□□□□ -0.96
COL4A6-203ENST00000394872 M0R2Z0 102 aa9.05□□□□□ -0.96
COL4A6-203ENST00000394872 TCL1AP56279 114 aa9.05□□□□□ -0.96
COL4A6-203ENST00000394872 RIGQ13278 110 aa9.05□□□□□ -0.96
COL4A6-203ENST00000394872 PMS2P11Q13670 270 aa9.05□□□□□ -0.96
COL4A6-203ENST00000394872 J3QR06 171 aa9.05□□□□□ -0.96
COL4A6-203ENST00000394872 RAB29O14966 203 aa9.05□□□□□ -0.96
COL4A6-203ENST00000394872 COL8A1P27658 744 aa9.05□□□□□ -0.96
COL4A6-203ENST00000394872 C19orf57Q0VDD7 668 aa9.05□□□□□ -0.96
COL4A6-203ENST00000394872 P2RY6Q15077 328 aa9.05□□□□□ -0.96
COL4A6-203ENST00000394872 DHRS11Q6UWP2 260 aa9.05□□□□□ -0.96
COL4A6-203ENST00000394872 PHYHIPLQ96FC7 376 aa9.05□□□□□ -0.96
COL4A6-203ENST00000394872 GSX1Q9H4S2 264 aaPredicted RBP9.05□□□□□ -0.96
COL4A6-203ENST00000394872 CYB5R1Q9UHQ9 305 aa9.05□□□□□ -0.96
COL4A6-203ENST00000394872 TRIP12Q14669 1992 aaPredicted RBP9.05□□□□□ -0.96
COL4A6-203ENST00000394872 SCN3AQ9NY46 2000 aa9.05□□□□□ -0.96
COL4A6-203ENST00000394872 LOC102724200A0A096LPH7 203 aaPredicted RBP9.05□□□□□ -0.96
COL4A6-203ENST00000394872 CA11O75493 328 aa9.05□□□□□ -0.96
COL4A6-203ENST00000394872 FAM106CPP0CH98 169 aa9.05□□□□□ -0.96
COL4A6-203ENST00000394872 GUCA2BQ16661 112 aa9.05□□□□□ -0.96
COL4A6-203ENST00000394872 SEZ6L2Q6UXD5 910 aa9.05□□□□□ -0.96
COL4A6-203ENST00000394872 FAM24BQ8N5W8 94 aa9.05□□□□□ -0.96
COL4A6-203ENST00000394872 TEX29Q8N6K0 151 aa9.05□□□□□ -0.96
COL4A6-203ENST00000394872 ANGPTL6Q8NI99 470 aa9.05□□□□□ -0.96
COL4A6-203ENST00000394872 ADAT3Q96EY9 351 aaPredicted RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms