RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 MAP1LC3B2A6NCE7 125 aa14.09□□□□□ -0.15
PHTF1-205ENST00000393357 PITX3O75364 302 aa14.09□□□□□ -0.15
PHTF1-205ENST00000393357 ZNF737O75373 536 aa14.09□□□□□ -0.15
PHTF1-205ENST00000393357 IL18BPO95998 194 aa14.09□□□□□ -0.15
PHTF1-205ENST00000393357 CYB5R3P00387 301 aaPredicted RBP14.09□□□□□ -0.15
PHTF1-205ENST00000393357 TCN2P20062 427 aa14.09□□□□□ -0.15
PHTF1-205ENST00000393357 CARD18P57730 90 aa14.09□□□□□ -0.15
PHTF1-205ENST00000393357 ARL16Q0P5N6 197 aa14.09□□□□□ -0.15
PHTF1-205ENST00000393357 PLPPR5Q32ZL2 321 aa14.09□□□□□ -0.15
PHTF1-205ENST00000393357 RBM14Q96PK6 669 aaKnown RBP14.09□□□□□ -0.15
PHTF1-205ENST00000393357 MAP1LC3BQ9GZQ8 125 aa14.09□□□□□ -0.15
PHTF1-205ENST00000393357 TMEM222Q9H0R3 208 aa14.09□□□□□ -0.15
PHTF1-205ENST00000393357 TNFSF11O14788 317 aa14.08□□□□□ -0.16
PHTF1-205ENST00000393357 WDR1O75083 606 aa14.08□□□□□ -0.16
PHTF1-205ENST00000393357 PCP4P48539 62 aa14.08□□□□□ -0.16
PHTF1-205ENST00000393357 SLC35E3Q7Z769 313 aa14.08□□□□□ -0.16
PHTF1-205ENST00000393357 ZNF611Q8N823 705 aa14.08□□□□□ -0.16
PHTF1-205ENST00000393357 ZNF845Q96IR2 970 aaPredicted RBP14.08□□□□□ -0.16
PHTF1-205ENST00000393357 FAM103A1Q9BTL3 118 aaKnown RBP14.08□□□□□ -0.16
PHTF1-205ENST00000393357 PRSS50Q9UI38 385 aa14.08□□□□□ -0.16
PHTF1-205ENST00000393357 A0A096LPE4 126 aa14.08□□□□□ -0.16
PHTF1-205ENST00000393357 TRAV34A0A0B4J273 112 aa14.08□□□□□ -0.16
PHTF1-205ENST00000393357 A0A1W2PPZ6 126 aa14.08□□□□□ -0.16
PHTF1-205ENST00000393357 SHBQ15464 509 aa14.08□□□□□ -0.16
PHTF1-205ENST00000393357 ZNF726P1Q15940 193 aa14.08□□□□□ -0.16
PHTF1-205ENST00000393357 FAM78BQ5VT40 261 aa14.08□□□□□ -0.16
PHTF1-205ENST00000393357 SLC23A3Q6PIS1 610 aa14.08□□□□□ -0.16
PHTF1-205ENST00000393357 ODF3L1Q8IXM7 274 aa14.08□□□□□ -0.16
PHTF1-205ENST00000393357 OR51G1Q8NGK1 321 aa14.08□□□□□ -0.16
PHTF1-205ENST00000393357 SPTSSAQ969W0 71 aa14.08□□□□□ -0.16
PHTF1-205ENST00000393357 GNPNAT1Q96EK6 184 aaPredicted RBP14.08□□□□□ -0.16
PHTF1-205ENST00000393357 RCC1LQ96I51 464 aaKnown RBP14.08□□□□□ -0.16
PHTF1-205ENST00000393357 TMEM68Q96MH6 324 aa14.08□□□□□ -0.16
PHTF1-205ENST00000393357 DKKL1Q9UK85 242 aa14.08□□□□□ -0.16
PHTF1-205ENST00000393357 EPOPA6NHQ4 379 aa14.07□□□□□ -0.16
PHTF1-205ENST00000393357 CEACAM1P13688 526 aa14.07□□□□□ -0.16
PHTF1-205ENST00000393357 UCP3P55916 312 aa14.07□□□□□ -0.16
PHTF1-205ENST00000393357 ENDOGQ14249 297 aaKnown RBP14.07□□□□□ -0.16
PHTF1-205ENST00000393357 TOMM20LQ6UXN7 152 aa14.07□□□□□ -0.16
PHTF1-205ENST00000393357 RNF150Q9ULK6 438 aa14.07□□□□□ -0.16
PHTF1-205ENST00000393357 ZNF320A2RRD8 509 aa14.07□□□□□ -0.16
PHTF1-205ENST00000393357 ZNF92Q03936 586 aa14.07□□□□□ -0.16
PHTF1-205ENST00000393357 ZP4Q12836 540 aa14.07□□□□□ -0.16
PHTF1-205ENST00000393357 PP6455Q8WZ26 134 aa14.07□□□□□ -0.16
PHTF1-205ENST00000393357 MOB3AQ96BX8 217 aa14.07□□□□□ -0.16
PHTF1-205ENST00000393357 PLPPR2Q96GM1 343 aa14.07□□□□□ -0.16
PHTF1-205ENST00000393357 OXGR1Q96P68 337 aa14.07□□□□□ -0.16
PHTF1-205ENST00000393357 GTF3C1Q12789 2109 aa14.07□□□□□ -0.16
PHTF1-205ENST00000393357 LOC400499M0QZD8 3231 aa14.07□□□□□ -0.16
PHTF1-205ENST00000393357 FOXI3A8MTJ6 420 aaPredicted RBP14.07□□□□□ -0.16
PHTF1-205ENST00000393357 C1QTNF9BB2RNN3 333 aa14.07□□□□□ -0.16
PHTF1-205ENST00000393357 DHHO43323 396 aa14.07□□□□□ -0.16
PHTF1-205ENST00000393357 ZNF32P17041 273 aa14.07□□□□□ -0.16
PHTF1-205ENST00000393357 GPM6AP51674 278 aa14.07□□□□□ -0.16
PHTF1-205ENST00000393357 TAS2R30P59541 319 aa14.07□□□□□ -0.16
PHTF1-205ENST00000393357 CFHR1Q03591 330 aa14.07□□□□□ -0.16
PHTF1-205ENST00000393357 BSXQ3C1V8 233 aa14.07□□□□□ -0.16
PHTF1-205ENST00000393357 DMRTA1Q5VZB9 504 aa14.07□□□□□ -0.16
PHTF1-205ENST00000393357 KIAA0895LQ68EN5 471 aa14.07□□□□□ -0.16
PHTF1-205ENST00000393357 Q6ZRM9 215 aa14.07□□□□□ -0.16
PHTF1-205ENST00000393357 OR10V1Q8NGI7 309 aa14.07□□□□□ -0.16
PHTF1-205ENST00000393357 ATP5SQ99766 215 aa14.07□□□□□ -0.16
PHTF1-205ENST00000393357 SDF2L1Q9HCN8 221 aa14.07□□□□□ -0.16
PHTF1-205ENST00000393357 TUBG2Q9NRH3 451 aa14.07□□□□□ -0.16
PHTF1-205ENST00000393357 MUC22E2RYF6 1773 aaPredicted RBP14.06□□□□□ -0.16
PHTF1-205ENST00000393357 NUPR1O60356 82 aa14.06□□□□□ -0.16
PHTF1-205ENST00000393357 IMMP2LQ96T52 175 aa14.06□□□□□ -0.16
PHTF1-205ENST00000393357 DEFB126Q9BYW3 111 aa14.06□□□□□ -0.16
PHTF1-205ENST00000393357 A0A1B0GX78 115 aa14.06□□□□□ -0.16
PHTF1-205ENST00000393357 DVL1O14640 695 aa14.06□□□□□ -0.16
PHTF1-205ENST00000393357 CLDN1O95832 211 aa14.06□□□□□ -0.16
PHTF1-205ENST00000393357 HBE1P02100 147 aa14.06□□□□□ -0.16
PHTF1-205ENST00000393357 FGF5P12034 268 aa14.06□□□□□ -0.16
PHTF1-205ENST00000393357 HERPUD1Q15011 391 aa14.06□□□□□ -0.16
PHTF1-205ENST00000393357 FGFBP3Q8TAT2 258 aa14.06□□□□□ -0.16
PHTF1-205ENST00000393357 TBX15Q96SF7 602 aa14.06□□□□□ -0.16
PHTF1-205ENST00000393357 NUDT16L1Q9BRJ7 211 aaKnown RBP14.06□□□□□ -0.16
PHTF1-205ENST00000393357 C2orf88Q9BSF0 95 aa14.06□□□□□ -0.16
PHTF1-205ENST00000393357 MUC3AQ02505 3323 aa14.05□□□□□ -0.16
PHTF1-205ENST00000393357 BCAT2O15382 392 aaPredicted RBP14.05□□□□□ -0.16
PHTF1-205ENST00000393357 TUSC2O75896 110 aa14.05□□□□□ -0.16
PHTF1-205ENST00000393357 BCL3P20749 454 aa14.05□□□□□ -0.16
PHTF1-205ENST00000393357 EXT1Q16394 746 aa14.05□□□□□ -0.16
PHTF1-205ENST00000393357 PRR31Q5SQ13 230 aa14.05□□□□□ -0.16
PHTF1-205ENST00000393357 YRDCQ86U90 279 aaKnown RBP14.05□□□□□ -0.16
PHTF1-205ENST00000393357 SPIN2AQ99865 258 aa14.05□□□□□ -0.16
PHTF1-205ENST00000393357 SPIN2BQ9BPZ2 258 aa14.05□□□□□ -0.16
PHTF1-205ENST00000393357 TM2D1Q9BX74 207 aa14.05□□□□□ -0.16
PHTF1-205ENST00000393357 PSENENQ9NZ42 101 aa14.05□□□□□ -0.16
PHTF1-205ENST00000393357 SEMA5BQ9P283 1151 aa14.05□□□□□ -0.16
PHTF1-205ENST00000393357 TPRP12270 2363 aaKnown RBP14.05□□□□□ -0.16
PHTF1-205ENST00000393357 A0A087WWC5 75 aa14.05□□□□□ -0.16
PHTF1-205ENST00000393357 ECI1P42126 302 aa14.05□□□□□ -0.16
PHTF1-205ENST00000393357 TMEM241Q24JQ0 296 aa14.05□□□□□ -0.16
PHTF1-205ENST00000393357 OR6X1Q8NH79 312 aa14.05□□□□□ -0.16
PHTF1-205ENST00000393357 GPR146Q96CH1 333 aa14.05□□□□□ -0.16
PHTF1-205ENST00000393357 NEU1Q99519 415 aa14.05□□□□□ -0.16
PHTF1-205ENST00000393357 HS3ST3A1Q9Y663 406 aa14.05□□□□□ -0.16
PHTF1-205ENST00000393357 NUBP1P53384 320 aa14.05□□□□□ -0.16
PHTF1-205ENST00000393357 SLC16A14Q7RTX9 510 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms