RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 OSGIN2Q9Y236 505 aa16.38■□□□□ 0.21
CCDC50-202ENST00000392456 K7EPK0 472 aa16.37■□□□□ 0.21
CCDC50-202ENST00000392456 DHHO43323 396 aa16.37■□□□□ 0.21
CCDC50-202ENST00000392456 GPRIN2O60269 458 aa16.37■□□□□ 0.21
CCDC50-202ENST00000392456 RPL19P84098 196 aaKnown RBP16.37■□□□□ 0.21
CCDC50-202ENST00000392456 SLC25A26Q70HW3 274 aa16.37■□□□□ 0.21
CCDC50-202ENST00000392456 ZNF101Q8IZC7 436 aa16.37■□□□□ 0.21
CCDC50-202ENST00000392456 FAM71E2Q8N5Q1 922 aa16.37■□□□□ 0.21
CCDC50-202ENST00000392456 CASTOR1Q8WTX7 329 aa16.37■□□□□ 0.21
CCDC50-202ENST00000392456 NABP1Q96AH0 204 aa16.37■□□□□ 0.21
CCDC50-202ENST00000392456 ULBP2Q9BZM5 246 aa16.37■□□□□ 0.21
CCDC50-202ENST00000392456 ANOS1P23352 680 aa16.37■□□□□ 0.21
CCDC50-202ENST00000392456 GLIPR1P48060 266 aa16.37■□□□□ 0.21
CCDC50-202ENST00000392456 TMEM241Q24JQ0 296 aa16.37■□□□□ 0.21
CCDC50-202ENST00000392456 C10orf128Q5T292 105 aa16.37■□□□□ 0.21
CCDC50-202ENST00000392456 KCTD18Q6PI47 426 aaPredicted RBP16.37■□□□□ 0.21
CCDC50-202ENST00000392456 LINC01551Q86U37 167 aa16.37■□□□□ 0.21
CCDC50-202ENST00000392456 ZADH2Q8N4Q0 377 aa16.37■□□□□ 0.21
CCDC50-202ENST00000392456 SEH1LQ96EE3 360 aa16.37■□□□□ 0.21
CCDC50-202ENST00000392456 NMES1Q9C002 83 aa16.37■□□□□ 0.21
CCDC50-202ENST00000392456 CDH20Q9HBT6 801 aa16.37■□□□□ 0.21
CCDC50-202ENST00000392456 GTF2A1LQ9UNN4 478 aa16.37■□□□□ 0.21
CCDC50-202ENST00000392456 H3BQ15 152 aa16.36■□□□□ 0.21
CCDC50-202ENST00000392456 RAB27BO00194 218 aa16.36■□□□□ 0.21
CCDC50-202ENST00000392456 TOMM40O96008 361 aa16.36■□□□□ 0.21
CCDC50-202ENST00000392456 ZNF133P52736 654 aaPredicted RBP16.36■□□□□ 0.21
CCDC50-202ENST00000392456 VAMP2P63027 116 aa16.36■□□□□ 0.21
CCDC50-202ENST00000392456 PRSS57Q6UWY2 283 aa16.36■□□□□ 0.21
CCDC50-202ENST00000392456 RNF133Q8WVZ7 376 aa16.36■□□□□ 0.21
CCDC50-202ENST00000392456 SLAMF6Q96DU3 332 aa16.36■□□□□ 0.21
CCDC50-202ENST00000392456 PHB2Q99623 299 aa16.36■□□□□ 0.21
CCDC50-202ENST00000392456 CNTNAP3Q9BZ76 1288 aa16.36■□□□□ 0.21
CCDC50-202ENST00000392456 ARV1Q9H2C2 271 aa16.36■□□□□ 0.21
CCDC50-202ENST00000392456 ZNF430Q9H8G1 570 aaPredicted RBP16.36■□□□□ 0.21
CCDC50-202ENST00000392456 CALHM2Q9HA72 323 aa16.36■□□□□ 0.21
CCDC50-202ENST00000392456 SLC7A11Q9UPY5 501 aa16.36■□□□□ 0.21
CCDC50-202ENST00000392456 ZNF281Q9Y2X9 895 aa16.36■□□□□ 0.21
CCDC50-202ENST00000392456 LMO1P25800 156 aa16.36■□□□□ 0.21
CCDC50-202ENST00000392456 IGFL3Q6UXB1 125 aa16.36■□□□□ 0.21
CCDC50-202ENST00000392456 SUMF2Q8NBJ7 301 aa16.36■□□□□ 0.21
CCDC50-202ENST00000392456 OR5AK2Q8NH90 309 aa16.36■□□□□ 0.21
CCDC50-202ENST00000392456 THRSPQ92748 146 aa16.36■□□□□ 0.21
CCDC50-202ENST00000392456 C4orf45Q96LM5 186 aa16.36■□□□□ 0.21
CCDC50-202ENST00000392456 C20orf144Q9BQM9 153 aa16.36■□□□□ 0.21
CCDC50-202ENST00000392456 POLR1DQ9Y2S0 133 aa16.36■□□□□ 0.21
CCDC50-202ENST00000392456 C5orf51A6NDU8 294 aa16.35■□□□□ 0.21
CCDC50-202ENST00000392456 TAAR5O14804 337 aa16.35■□□□□ 0.21
CCDC50-202ENST00000392456 SRSF10O75494 262 aaKnown RBP16.35■□□□□ 0.21
CCDC50-202ENST00000392456 CD37P11049 281 aa16.35■□□□□ 0.21
CCDC50-202ENST00000392456 ELLP55199 621 aaPredicted RBP16.35■□□□□ 0.21
CCDC50-202ENST00000392456 SPOCK1Q08629 439 aa16.35■□□□□ 0.21
CCDC50-202ENST00000392456 PPP1R1AQ13522 171 aa16.35■□□□□ 0.21
CCDC50-202ENST00000392456 SLC25A42Q86VD7 318 aa16.35■□□□□ 0.21
CCDC50-202ENST00000392456 RBMXL3Q8N7X1 1067 aaKnown RBP16.35■□□□□ 0.21
CCDC50-202ENST00000392456 EMC9Q9Y3B6 208 aa16.35■□□□□ 0.21
CCDC50-202ENST00000392456 CHD3Q12873 2000 aaKnown RBP16.35■□□□□ 0.21
CCDC50-202ENST00000392456 IGKV3D-15A0A087WSY6 115 aa16.35■□□□□ 0.21
CCDC50-202ENST00000392456 CCKARP32238 428 aa16.35■□□□□ 0.21
CCDC50-202ENST00000392456 ENDOGQ14249 297 aaKnown RBP16.35■□□□□ 0.21
CCDC50-202ENST00000392456 TSPO2Q5TGU0 170 aa16.35■□□□□ 0.21
CCDC50-202ENST00000392456 PRSS54Q6PEW0 395 aa16.35■□□□□ 0.21
CCDC50-202ENST00000392456 CMTM1Q8IZ96 169 aa16.35■□□□□ 0.21
CCDC50-202ENST00000392456 PRRG4Q9BZD6 226 aa16.35■□□□□ 0.21
CCDC50-202ENST00000392456 SYNGR4O95473 234 aa16.34■□□□□ 0.21
CCDC50-202ENST00000392456 IFNA21P01568 189 aa16.34■□□□□ 0.21
CCDC50-202ENST00000392456 IGHG3P01860 377 aa16.34■□□□□ 0.21
CCDC50-202ENST00000392456 SOX2P48431 317 aa16.34■□□□□ 0.21
CCDC50-202ENST00000392456 SSBP1Q04837 148 aaKnown RBP16.34■□□□□ 0.21
CCDC50-202ENST00000392456 HIKESHIQ53FT3 197 aa16.34■□□□□ 0.21
CCDC50-202ENST00000392456 RTL6Q6ICC9 239 aa16.34■□□□□ 0.21
CCDC50-202ENST00000392456 OR4X1Q8NH49 305 aa16.34■□□□□ 0.21
CCDC50-202ENST00000392456 PBDC1Q9BVG4 233 aa16.34■□□□□ 0.21
CCDC50-202ENST00000392456 PARP12Q9H0J9 701 aaKnown RBP16.34■□□□□ 0.21
CCDC50-202ENST00000392456 PNRC2Q9NPJ4 139 aaKnown RBP16.34■□□□□ 0.21
CCDC50-202ENST00000392456 OR5AC2Q9NZP5 309 aa16.34■□□□□ 0.21
CCDC50-202ENST00000392456 MCTS1Q9ULC4 181 aaKnown RBP16.34■□□□□ 0.21
CCDC50-202ENST00000392456 C13orf42A0A1B0GVH6 325 aa16.34■□□□□ 0.21
CCDC50-202ENST00000392456 CST4P01036 141 aa16.34■□□□□ 0.21
CCDC50-202ENST00000392456 ZNF735P0CB33 412 aa16.34■□□□□ 0.21
CCDC50-202ENST00000392456 FOXG1P55316 489 aaPredicted RBP16.34■□□□□ 0.21
CCDC50-202ENST00000392456 UCP3P55916 312 aa16.34■□□□□ 0.21
CCDC50-202ENST00000392456 FAM71F1Q96KD3 344 aaPredicted RBP16.34■□□□□ 0.21
CCDC50-202ENST00000392456 GINS3Q9BRX5 216 aa16.34■□□□□ 0.21
CCDC50-202ENST00000392456 FKBP11Q9NYL4 201 aa16.34■□□□□ 0.21
CCDC50-202ENST00000392456 VSIG4Q9Y279 399 aa16.34■□□□□ 0.21
CCDC50-202ENST00000392456 MED12LQ86YW9 2145 aa16.33■□□□□ 0.21
CCDC50-202ENST00000392456 A0A1B0GW64 132 aa16.33■□□□□ 0.2
CCDC50-202ENST00000392456 SCGB1D1O95968 90 aa16.33■□□□□ 0.2
CCDC50-202ENST00000392456 AMY2AP04746 511 aa16.33■□□□□ 0.2
CCDC50-202ENST00000392456 OR10J1P30954 320 aa16.33■□□□□ 0.2
CCDC50-202ENST00000392456 CX3CR1P49238 355 aa16.33■□□□□ 0.2
CCDC50-202ENST00000392456 STAC2Q6ZMT1 411 aa16.33■□□□□ 0.2
CCDC50-202ENST00000392456 ZNF676Q8N7Q3 588 aa16.33■□□□□ 0.2
CCDC50-202ENST00000392456 TMEM18Q96B42 140 aa16.33■□□□□ 0.2
CCDC50-202ENST00000392456 ABHD17AQ96GS6 310 aa16.33■□□□□ 0.2
CCDC50-202ENST00000392456 PPP5D1E7EU14 171 aa16.33■□□□□ 0.2
CCDC50-202ENST00000392456 MRPL33O75394 65 aaKnown RBP16.33■□□□□ 0.2
CCDC50-202ENST00000392456 CSTBP04080 98 aaKnown RBP16.33■□□□□ 0.2
CCDC50-202ENST00000392456 H2BFMP0C1H6 154 aa16.33■□□□□ 0.2
CCDC50-202ENST00000392456 PATE4P0C8F1 98 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms