RNA–Protein interactions for RNA: ENST00000390468.1

TRAV41-201, Transcript of T cell receptor alpha variable 41, humanhuman

APPRIS P1 BASIC

Gene TRAV41, Length 336 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41-201ENST00000390468 HAVCR2Q8TDQ0 301 aa2.29□□□□□ -2.04
TRAV41-201ENST00000390468 TMEM170AQ8WVE7 144 aa2.29□□□□□ -2.04
TRAV41-201ENST00000390468 TMEM239Q8WW34 195 aa2.29□□□□□ -2.04
TRAV41-201ENST00000390468 SPRYD4Q8WW59 207 aaPredicted RBP2.29□□□□□ -2.04
TRAV41-201ENST00000390468 ASB10Q8WXI3 467 aa2.29□□□□□ -2.04
TRAV41-201ENST00000390468 RAB8BQ92930 207 aa2.29□□□□□ -2.04
TRAV41-201ENST00000390468 TSLPQ969D9 159 aa2.29□□□□□ -2.04
TRAV41-201ENST00000390468 STARD4Q96DR4 205 aa2.29□□□□□ -2.04
TRAV41-201ENST00000390468 RBMXL1Q96E39 390 aaKnown RBP2.29□□□□□ -2.04
TRAV41-201ENST00000390468 KTI12Q96EK9 354 aaPredicted RBP2.29□□□□□ -2.04
TRAV41-201ENST00000390468 NEIL1Q96FI4 390 aaPredicted RBP2.29□□□□□ -2.04
TRAV41-201ENST00000390468 SDSLQ96GA7 329 aa2.29□□□□□ -2.04
TRAV41-201ENST00000390468 HIST1H2AAQ96QV6 131 aa2.29□□□□□ -2.04
TRAV41-201ENST00000390468 NRTNQ99748 197 aa2.29□□□□□ -2.04
TRAV41-201ENST00000390468 NKX3-1Q99801 234 aaPredicted RBP2.29□□□□□ -2.04
TRAV41-201ENST00000390468 NDC1Q9BTX1 674 aa2.29□□□□□ -2.04
TRAV41-201ENST00000390468 NMES1Q9C002 83 aa2.29□□□□□ -2.04
TRAV41-201ENST00000390468 POLR2J3Q9H1A7 115 aaKnown RBP2.29□□□□□ -2.04
TRAV41-201ENST00000390468 WDR13Q9H1Z4 485 aa2.29□□□□□ -2.04
TRAV41-201ENST00000390468 C1orf198Q9H425 327 aa2.29□□□□□ -2.04
TRAV41-201ENST00000390468 CDH20Q9HBT6 801 aa2.29□□□□□ -2.04
TRAV41-201ENST00000390468 Q9N2K0 584 aa2.29□□□□□ -2.04
TRAV41-201ENST00000390468 A4GALTQ9NPC4 353 aa2.29□□□□□ -2.04
TRAV41-201ENST00000390468 OR2S2Q9NQN1 319 aa2.29□□□□□ -2.04
TRAV41-201ENST00000390468 SIRT3Q9NTG7 399 aaPredicted RBP2.29□□□□□ -2.04
TRAV41-201ENST00000390468 MRPS18AQ9NVS2 196 aaKnown RBP2.29□□□□□ -2.04
TRAV41-201ENST00000390468 MRPL16Q9NX20 251 aaKnown RBP2.29□□□□□ -2.04
TRAV41-201ENST00000390468 ELOVL5Q9NYP7 299 aa2.29□□□□□ -2.04
TRAV41-201ENST00000390468 TVP23BQ9NYZ1 205 aa2.29□□□□□ -2.04
TRAV41-201ENST00000390468 KCNIP1Q9NZI2 227 aa2.29□□□□□ -2.04
TRAV41-201ENST00000390468 LRIT1Q9P2V4 623 aa2.29□□□□□ -2.04
TRAV41-201ENST00000390468 P2RX2Q9UBL9 471 aa2.29□□□□□ -2.04
TRAV41-201ENST00000390468 ZNF391Q9UJN7 358 aa2.29□□□□□ -2.04
TRAV41-201ENST00000390468 PILRBQ9UKJ0 227 aa2.29□□□□□ -2.04
TRAV41-201ENST00000390468 RALYQ9UKM9 306 aaKnown RBP2.29□□□□□ -2.04
TRAV41-201ENST00000390468 MRPS28Q9Y2Q9 187 aaKnown RBP2.29□□□□□ -2.04
TRAV41-201ENST00000390468 PAM16Q9Y3D7 125 aa2.29□□□□□ -2.04
TRAV41-201ENST00000390468 WDR45Q9Y484 360 aa2.29□□□□□ -2.04
TRAV41-201ENST00000390468 CSAG2Q9Y5P2 127 aa2.29□□□□□ -2.04
TRAV41-201ENST00000390468 MYO15AQ9UKN7 3530 aa2.29□□□□□ -2.04
TRAV41-201ENST00000390468 UNC80Q8N2C7 3258 aa2.29□□□□□ -2.04
TRAV41-201ENST00000390468 CACNA1CQ13936 2221 aa2.28□□□□□ -2.04
TRAV41-201ENST00000390468 DSPPQ9NZW4 1301 aa2.28□□□□□ -2.04
TRAV41-201ENST00000390468 TRIOO75962 3097 aa2.28□□□□□ -2.04
TRAV41-201ENST00000390468 TRBV5-3A0A0A0MS03 114 aa2.28□□□□□ -2.04
TRAV41-201ENST00000390468 TRBV6-7A0A0A0MS04 114 aa2.28□□□□□ -2.04
TRAV41-201ENST00000390468 A0A0A6YYD5 115 aa2.28□□□□□ -2.04
TRAV41-201ENST00000390468 TRAV25A0A0B4J276 109 aa2.28□□□□□ -2.04
TRAV41-201ENST00000390468 A0A0G2JMM0 328 aa2.28□□□□□ -2.04
TRAV41-201ENST00000390468 A0A1B0GU03 582 aa2.28□□□□□ -2.04
TRAV41-201ENST00000390468 A0A1W2PPB8 328 aa2.28□□□□□ -2.04
TRAV41-201ENST00000390468 C1orf226A1L170 272 aa2.28□□□□□ -2.04
TRAV41-201ENST00000390468 A6NDN8 102 aa2.28□□□□□ -2.04
TRAV41-201ENST00000390468 GAGE10A6NGK3 116 aa2.28□□□□□ -2.04
TRAV41-201ENST00000390468 KIR3DP1A8MWS1 328 aa2.28□□□□□ -2.04
TRAV41-201ENST00000390468 TMEM150CB9EJG8 249 aa2.28□□□□□ -2.04
TRAV41-201ENST00000390468 H0YGG7 62 aa2.28□□□□□ -2.04
TRAV41-201ENST00000390468 M0R129 80 aa2.28□□□□□ -2.04
TRAV41-201ENST00000390468 SIRPB1O00241 398 aa2.28□□□□□ -2.04
TRAV41-201ENST00000390468 RNASET2O00584 256 aaKnown RBP2.28□□□□□ -2.04
TRAV41-201ENST00000390468 HSD17B6O14756 317 aa2.28□□□□□ -2.04
TRAV41-201ENST00000390468 TNFSF14O43557 240 aa2.28□□□□□ -2.04
TRAV41-201ENST00000390468 TMPRSS11DO60235 418 aa2.28□□□□□ -2.04
TRAV41-201ENST00000390468 NDUFB8O95169 186 aa2.28□□□□□ -2.04
TRAV41-201ENST00000390468 UTS2O95399 124 aa2.28□□□□□ -2.04
TRAV41-201ENST00000390468 DUS4LO95620 317 aaKnown RBP2.28□□□□□ -2.04
TRAV41-201ENST00000390468 TSPAN13O95857 204 aa2.28□□□□□ -2.04
TRAV41-201ENST00000390468 TBX6O95947 436 aaPredicted RBP2.28□□□□□ -2.04
TRAV41-201ENST00000390468 NUDT3O95989 172 aa2.28□□□□□ -2.04
TRAV41-201ENST00000390468 IFNA1P01562 189 aa2.28□□□□□ -2.04
TRAV41-201ENST00000390468 HLA-HP01893 362 aa2.28□□□□□ -2.04
TRAV41-201ENST00000390468 OPN1SWP03999 348 aa2.28□□□□□ -2.04
TRAV41-201ENST00000390468 CSTBP04080 98 aaKnown RBP2.28□□□□□ -2.04
TRAV41-201ENST00000390468 HSPB1P04792 205 aaKnown RBP2.28□□□□□ -2.04
TRAV41-201ENST00000390468 CTSDP07339 412 aaPredicted RBP2.28□□□□□ -2.04
TRAV41-201ENST00000390468 CHRM2P08172 466 aa2.28□□□□□ -2.04
TRAV41-201ENST00000390468 CXCL1P09341 107 aa2.28□□□□□ -2.04
TRAV41-201ENST00000390468 SEC11BP0C7V7 166 aa2.28□□□□□ -2.04
TRAV41-201ENST00000390468 FAM157CP0CG43 387 aa2.28□□□□□ -2.04
TRAV41-201ENST00000390468 PGA4P0DJD7 388 aa2.28□□□□□ -2.04
TRAV41-201ENST00000390468 PGA5P0DJD9 388 aa2.28□□□□□ -2.04
TRAV41-201ENST00000390468 VSIG10L2P0DP72 767 aa2.28□□□□□ -2.04
TRAV41-201ENST00000390468 PVRP15151 417 aa2.28□□□□□ -2.04
TRAV41-201ENST00000390468 ST6GAL1P15907 406 aa2.28□□□□□ -2.04
TRAV41-201ENST00000390468 AZU1P20160 251 aa2.28□□□□□ -2.04
TRAV41-201ENST00000390468 DUSP1P28562 367 aa2.28□□□□□ -2.04
TRAV41-201ENST00000390468 HTR1FP30939 366 aa2.28□□□□□ -2.04
TRAV41-201ENST00000390468 SRD5A2P31213 254 aa2.28□□□□□ -2.04
TRAV41-201ENST00000390468 MPLP40238 635 aa2.28□□□□□ -2.04
TRAV41-201ENST00000390468 PTH2RP49190 550 aa2.28□□□□□ -2.04
TRAV41-201ENST00000390468 DUSP3P51452 185 aaPredicted RBP2.28□□□□□ -2.04
TRAV41-201ENST00000390468 P2RX1P51575 399 aa2.28□□□□□ -2.04
TRAV41-201ENST00000390468 GPM6AP51674 278 aa2.28□□□□□ -2.04
TRAV41-201ENST00000390468 CNN1P51911 297 aaKnown RBP2.28□□□□□ -2.04
TRAV41-201ENST00000390468 RND2P52198 227 aa2.28□□□□□ -2.04
TRAV41-201ENST00000390468 MVDP53602 400 aa2.28□□□□□ -2.04
TRAV41-201ENST00000390468 ATP1B3P54709 279 aa2.28□□□□□ -2.04
TRAV41-201ENST00000390468 GAS1P54826 345 aa2.28□□□□□ -2.04
TRAV41-201ENST00000390468 MFAP4P55083 255 aa2.28□□□□□ -2.04
TRAV41-201ENST00000390468 LIM2P55344 173 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms