RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 SLAMF1Q13291 335 aa2.78□□□□□ -1.96
RNU6-40P-201ENST00000384254 SKP2Q13309 424 aa2.78□□□□□ -1.96
RNU6-40P-201ENST00000384254 SLC9A3R2Q15599 337 aa2.78□□□□□ -1.96
RNU6-40P-201ENST00000384254 ZNHIT3Q15649 155 aaPredicted RBP2.78□□□□□ -1.96
RNU6-40P-201ENST00000384254 PP632Q6XCG6 107 aa2.78□□□□□ -1.96
RNU6-40P-201ENST00000384254 TCF23Q7RTU1 214 aa2.78□□□□□ -1.96
RNU6-40P-201ENST00000384254 NIT1Q86X76 327 aa2.78□□□□□ -1.96
RNU6-40P-201ENST00000384254 ZBTB8OSQ8IWT0 167 aa2.78□□□□□ -1.96
RNU6-40P-201ENST00000384254 MUC15Q8N387 334 aa2.78□□□□□ -1.96
RNU6-40P-201ENST00000384254 MAL2Q969L2 176 aa2.78□□□□□ -1.96
RNU6-40P-201ENST00000384254 IGF2BP2-AS1Q96M15 143 aa2.78□□□□□ -1.96
RNU6-40P-201ENST00000384254 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.78□□□□□ -1.96
RNU6-40P-201ENST00000384254 SPATA31E1Q6ZUB1 1445 aa2.77□□□□□ -1.97
RNU6-40P-201ENST00000384254 GGTLC3B5MD39 225 aa2.77□□□□□ -1.97
RNU6-40P-201ENST00000384254 SLC31A1O15431 190 aa2.77□□□□□ -1.97
RNU6-40P-201ENST00000384254 EEF1E1O43324 174 aaKnown RBP2.77□□□□□ -1.97
RNU6-40P-201ENST00000384254 PSCAO43653 123 aa2.77□□□□□ -1.97
RNU6-40P-201ENST00000384254 SCN2BO60939 215 aa2.77□□□□□ -1.97
RNU6-40P-201ENST00000384254 NDUFS6O75380 124 aaKnown RBP2.77□□□□□ -1.97
RNU6-40P-201ENST00000384254 OCMP0CE72 109 aaPredicted RBP2.77□□□□□ -1.97
RNU6-40P-201ENST00000384254 PSMD7P51665 324 aa2.77□□□□□ -1.97
RNU6-40P-201ENST00000384254 DYNLL1P63167 89 aaKnown RBP2.77□□□□□ -1.97
RNU6-40P-201ENST00000384254 GTF2BQ00403 316 aa2.77□□□□□ -1.97
RNU6-40P-201ENST00000384254 TAF9Q16594 264 aa2.77□□□□□ -1.97
RNU6-40P-201ENST00000384254 FAM19A3Q7Z5A8 133 aa2.77□□□□□ -1.97
RNU6-40P-201ENST00000384254 MTERF4Q7Z6M4 381 aaKnown RBP2.77□□□□□ -1.97
RNU6-40P-201ENST00000384254 BOD1L2Q8IYS8 172 aa2.77□□□□□ -1.97
RNU6-40P-201ENST00000384254 OR7G1Q8NGA0 311 aa2.77□□□□□ -1.97
RNU6-40P-201ENST00000384254 OR11L1Q8NGX0 322 aa2.77□□□□□ -1.97
RNU6-40P-201ENST00000384254 OR4A5Q8NH83 315 aa2.77□□□□□ -1.97
RNU6-40P-201ENST00000384254 SMIM12Q96EX1 92 aa2.77□□□□□ -1.97
RNU6-40P-201ENST00000384254 POTEKPQ9BYX7 375 aa2.77□□□□□ -1.97
RNU6-40P-201ENST00000384254 OR2D2Q9H210 308 aa2.77□□□□□ -1.97
RNU6-40P-201ENST00000384254 NRBP2Q9NSY0 501 aa2.77□□□□□ -1.97
RNU6-40P-201ENST00000384254 SHANK1Q9Y566 2161 aa2.76□□□□□ -1.97
RNU6-40P-201ENST00000384254 TRBV24-1A0A075B6N3 115 aa2.76□□□□□ -1.97
RNU6-40P-201ENST00000384254 A0A1W2PNN7 141 aa2.76□□□□□ -1.97
RNU6-40P-201ENST00000384254 C8orf87E5RJ46 101 aa2.76□□□□□ -1.97
RNU6-40P-201ENST00000384254 CETN3O15182 167 aa2.76□□□□□ -1.97
RNU6-40P-201ENST00000384254 SYNGR1O43759 233 aa2.76□□□□□ -1.97
RNU6-40P-201ENST00000384254 CDK14O94921 469 aa2.76□□□□□ -1.97
RNU6-40P-201ENST00000384254 BRI3O95415 125 aa2.76□□□□□ -1.97
RNU6-40P-201ENST00000384254 EPPINO95925 133 aa2.76□□□□□ -1.97
RNU6-40P-201ENST00000384254 FAM3AP98173 230 aa2.76□□□□□ -1.97
RNU6-40P-201ENST00000384254 KRTAP25-1Q3LHN0 102 aa2.76□□□□□ -1.97
RNU6-40P-201ENST00000384254 KRTCAP2Q8N6L1 136 aa2.76□□□□□ -1.97
RNU6-40P-201ENST00000384254 KCTD4Q8WVF5 259 aa2.76□□□□□ -1.97
RNU6-40P-201ENST00000384254 HIST1H2BAQ96A08 127 aa2.76□□□□□ -1.97
RNU6-40P-201ENST00000384254 SLC25A44Q96H78 314 aaPredicted RBP2.76□□□□□ -1.97
RNU6-40P-201ENST00000384254 DCUN1D5Q9BTE7 237 aa2.76□□□□□ -1.97
RNU6-40P-201ENST00000384254 HIGD2AQ9BW72 106 aa2.76□□□□□ -1.97
RNU6-40P-201ENST00000384254 KRTAP4-4Q9BYR3 166 aa2.76□□□□□ -1.97
RNU6-40P-201ENST00000384254 ARL6Q9H0F7 186 aa2.76□□□□□ -1.97
RNU6-40P-201ENST00000384254 METTL17Q9H7H0 456 aaPredicted RBP2.76□□□□□ -1.97
RNU6-40P-201ENST00000384254 U3KQK5 164 aa2.76□□□□□ -1.97
RNU6-40P-201ENST00000384254 TMEM94Q12767 1356 aa2.75□□□□□ -1.97
RNU6-40P-201ENST00000384254 RAB3GAP2Q9H2M9 1393 aa2.75□□□□□ -1.97
RNU6-40P-201ENST00000384254 B4DEV8 164 aa2.75□□□□□ -1.97
RNU6-40P-201ENST00000384254 F5H5T6 163 aa2.75□□□□□ -1.97
RNU6-40P-201ENST00000384254 TOX3O15405 576 aaPredicted RBP2.75□□□□□ -1.97
RNU6-40P-201ENST00000384254 AQP9O43315 295 aa2.75□□□□□ -1.97
RNU6-40P-201ENST00000384254 SH2D1AO60880 128 aa2.75□□□□□ -1.97
RNU6-40P-201ENST00000384254 CPSF4O95639 269 aaKnown RBP2.75□□□□□ -1.97
RNU6-40P-201ENST00000384254 FBP1P09467 338 aa2.75□□□□□ -1.97
RNU6-40P-201ENST00000384254 CGB3P0DN86 165 aa2.75□□□□□ -1.97
RNU6-40P-201ENST00000384254 CGB7P0DN87 165 aa2.75□□□□□ -1.97
RNU6-40P-201ENST00000384254 PSKH1P11801 424 aa2.75□□□□□ -1.97
RNU6-40P-201ENST00000384254 PSMA1P25786 263 aaKnown RBP2.75□□□□□ -1.97
RNU6-40P-201ENST00000384254 EVI2BP34910 448 aa2.75□□□□□ -1.97
RNU6-40P-201ENST00000384254 CRATP43155 626 aa2.75□□□□□ -1.97
RNU6-40P-201ENST00000384254 SULT1A2P50226 295 aa2.75□□□□□ -1.97
RNU6-40P-201ENST00000384254 MAP3K7CLP57077 242 aa2.75□□□□□ -1.97
RNU6-40P-201ENST00000384254 GABARAPL2P60520 117 aa2.75□□□□□ -1.97
RNU6-40P-201ENST00000384254 CLEC12BQ2HXU8 276 aa2.75□□□□□ -1.97
RNU6-40P-201ENST00000384254 CENPWQ5EE01 88 aa2.75□□□□□ -1.97
RNU6-40P-201ENST00000384254 HENMT1Q5T8I9 393 aaKnown RBP2.75□□□□□ -1.97
RNU6-40P-201ENST00000384254 NIPAL1Q6NVV3 410 aa2.75□□□□□ -1.97
RNU6-40P-201ENST00000384254 LFNGQ8NES3 379 aa2.75□□□□□ -1.97
RNU6-40P-201ENST00000384254 OR5D18Q8NGL1 313 aa2.75□□□□□ -1.97
RNU6-40P-201ENST00000384254 OR5K1Q8NHB7 308 aa2.75□□□□□ -1.97
RNU6-40P-201ENST00000384254 GALMQ96C23 342 aa2.75□□□□□ -1.97
RNU6-40P-201ENST00000384254 PKMYT1Q99640 499 aa2.75□□□□□ -1.97
RNU6-40P-201ENST00000384254 EBNA1BP2Q99848 306 aaKnown RBP2.75□□□□□ -1.97
RNU6-40P-201ENST00000384254 TSSK6Q9BXA6 273 aa2.75□□□□□ -1.97
RNU6-40P-201ENST00000384254 SLC19A3Q9BZV2 496 aa2.75□□□□□ -1.97
RNU6-40P-201ENST00000384254 CHST5Q9GZS9 411 aa2.75□□□□□ -1.97
RNU6-40P-201ENST00000384254 TMEM216Q9P0N5 145 aa2.75□□□□□ -1.97
RNU6-40P-201ENST00000384254 ZNF443Q9Y2A4 671 aaPredicted RBP2.75□□□□□ -1.97
RNU6-40P-201ENST00000384254 YLPM1P49750 1951 aaKnown RBP2.74□□□□□ -1.97
RNU6-40P-201ENST00000384254 J3QLI3 93 aa2.74□□□□□ -1.97
RNU6-40P-201ENST00000384254 K7EQS6 105 aa2.74□□□□□ -1.97
RNU6-40P-201ENST00000384254 SOX14O95416 240 aa2.74□□□□□ -1.97
RNU6-40P-201ENST00000384254 SKP1P63208 163 aa2.74□□□□□ -1.97
RNU6-40P-201ENST00000384254 DHRS2Q13268 280 aa2.74□□□□□ -1.97
RNU6-40P-201ENST00000384254 PYCR3Q53H96 274 aa2.74□□□□□ -1.97
RNU6-40P-201ENST00000384254 FAM45BPQ6NSW5 357 aa2.74□□□□□ -1.97
RNU6-40P-201ENST00000384254 BRD3OSQ6XYD6 125 aa2.74□□□□□ -1.97
RNU6-40P-201ENST00000384254 SPNS3Q6ZMD2 512 aa2.74□□□□□ -1.97
RNU6-40P-201ENST00000384254 OR9I1Q8NGQ6 314 aa2.74□□□□□ -1.97
RNU6-40P-201ENST00000384254 METTL9Q9H1A3 318 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms