RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 PDCD5O14737 125 aa7.5□□□□□ -1.21
HMGN1-202ENST00000380747 SLC22A1O15245 554 aa7.5□□□□□ -1.21
HMGN1-202ENST00000380747 FAM90A15PP0C7V4 464 aa7.5□□□□□ -1.21
HMGN1-202ENST00000380747 FAM90A13PP0C7W8 464 aa7.5□□□□□ -1.21
HMGN1-202ENST00000380747 FAM90A14PP0C7W9 464 aa7.5□□□□□ -1.21
HMGN1-202ENST00000380747 FAM90A24PP0C7X0 464 aa7.5□□□□□ -1.21
HMGN1-202ENST00000380747 NFYBP25208 207 aa7.5□□□□□ -1.21
HMGN1-202ENST00000380747 PAX6P26367 422 aa7.5□□□□□ -1.21
HMGN1-202ENST00000380747 GDNFP39905 211 aa7.5□□□□□ -1.21
HMGN1-202ENST00000380747 IER3P46695 156 aa7.5□□□□□ -1.21
HMGN1-202ENST00000380747 RBM39Q14498 530 aaKnown RBP7.5□□□□□ -1.21
HMGN1-202ENST00000380747 RAB11BQ15907 218 aa7.5□□□□□ -1.21
HMGN1-202ENST00000380747 LTC4SQ16873 150 aa7.5□□□□□ -1.21
HMGN1-202ENST00000380747 PDLIM3Q53GG5 364 aaPredicted RBP7.5□□□□□ -1.21
HMGN1-202ENST00000380747 NKAPLQ5M9Q1 402 aa7.5□□□□□ -1.21
HMGN1-202ENST00000380747 HES5Q5TA89 166 aa7.5□□□□□ -1.21
HMGN1-202ENST00000380747 SLC35E4Q6ICL7 350 aa7.5□□□□□ -1.21
HMGN1-202ENST00000380747 OR52W1Q6IF63 320 aa7.5□□□□□ -1.21
HMGN1-202ENST00000380747 RAB12Q6IQ22 244 aa7.5□□□□□ -1.21
HMGN1-202ENST00000380747 C16orf87Q6PH81 154 aa7.5□□□□□ -1.21
HMGN1-202ENST00000380747 BAIAP2L2Q6UXY1 529 aa7.5□□□□□ -1.21
HMGN1-202ENST00000380747 LHFPL4Q7Z7J7 247 aa7.5□□□□□ -1.21
HMGN1-202ENST00000380747 TMEM86BQ8N661 226 aa7.5□□□□□ -1.21
HMGN1-202ENST00000380747 ZNF565Q8N9K5 539 aa7.5□□□□□ -1.21
HMGN1-202ENST00000380747 OR11H6Q8NGC7 330 aa7.5□□□□□ -1.21
HMGN1-202ENST00000380747 KCNG3Q8TAE7 436 aa7.5□□□□□ -1.21
HMGN1-202ENST00000380747 CCDC107Q8WV48 283 aa7.5□□□□□ -1.21
HMGN1-202ENST00000380747 Q96M66 194 aa7.5□□□□□ -1.21
HMGN1-202ENST00000380747 CLEC7AQ9BXN2 247 aa7.5□□□□□ -1.21
HMGN1-202ENST00000380747 TMEM59Q9BXS4 323 aa7.5□□□□□ -1.21
HMGN1-202ENST00000380747 CHIAQ9BZP6 476 aa7.5□□□□□ -1.21
HMGN1-202ENST00000380747 DPAGT1Q9H3H5 408 aa7.5□□□□□ -1.21
HMGN1-202ENST00000380747 ZNF696Q9H7X3 374 aa7.5□□□□□ -1.21
HMGN1-202ENST00000380747 ETAA1Q9NY74 926 aa7.5□□□□□ -1.21
HMGN1-202ENST00000380747 CALYQ9NYX4 217 aa7.5□□□□□ -1.21
HMGN1-202ENST00000380747 ZNRD1Q9P1U0 126 aa7.5□□□□□ -1.21
HMGN1-202ENST00000380747 POMT1Q9Y6A1 747 aa7.5□□□□□ -1.21
HMGN1-202ENST00000380747 V9GY05 133 aa7.5□□□□□ -1.21
HMGN1-202ENST00000380747 IGHV2-26A0A0B4J1V2 119 aa7.49□□□□□ -1.21
HMGN1-202ENST00000380747 TRAV1-2A0A0B4J238 106 aa7.49□□□□□ -1.21
HMGN1-202ENST00000380747 KBTBD11-OT1A0A1B0GTJ5 212 aa7.49□□□□□ -1.21
HMGN1-202ENST00000380747 ODF3BA8MYP8 253 aa7.49□□□□□ -1.21
HMGN1-202ENST00000380747 H3BUI4 141 aa7.49□□□□□ -1.21
HMGN1-202ENST00000380747 AIPO00170 330 aa7.49□□□□□ -1.21
HMGN1-202ENST00000380747 PDCD6O75340 191 aa7.49□□□□□ -1.21
HMGN1-202ENST00000380747 TNFAIP8O95379 198 aa7.49□□□□□ -1.21
HMGN1-202ENST00000380747 CRYBA1P05813 215 aa7.49□□□□□ -1.21
HMGN1-202ENST00000380747 CD37P11049 281 aa7.49□□□□□ -1.21
HMGN1-202ENST00000380747 ARSBP15848 533 aa7.49□□□□□ -1.21
HMGN1-202ENST00000380747 FUT3P21217 361 aa7.49□□□□□ -1.21
HMGN1-202ENST00000380747 PSMD7P51665 324 aa7.49□□□□□ -1.21
HMGN1-202ENST00000380747 CLDN12P56749 244 aa7.49□□□□□ -1.21
HMGN1-202ENST00000380747 OR10A3P58181 314 aa7.49□□□□□ -1.21
HMGN1-202ENST00000380747 RPS27AP62979 156 aaKnown RBP7.49□□□□□ -1.21
HMGN1-202ENST00000380747 UNC119Q13432 240 aa7.49□□□□□ -1.21
HMGN1-202ENST00000380747 C17orf58Q2M2W7 97 aa7.49□□□□□ -1.21
HMGN1-202ENST00000380747 PLA1AQ53H76 456 aa7.49□□□□□ -1.21
HMGN1-202ENST00000380747 ZNF626Q68DY1 528 aa7.49□□□□□ -1.21
HMGN1-202ENST00000380747 CD200R1LQ6Q8B3 271 aa7.49□□□□□ -1.21
HMGN1-202ENST00000380747 HEPN1Q6WQI6 88 aa7.49□□□□□ -1.21
HMGN1-202ENST00000380747 ABHD12Q8N2K0 398 aa7.49□□□□□ -1.21
HMGN1-202ENST00000380747 BEND2Q8NDZ0 799 aa7.49□□□□□ -1.21
HMGN1-202ENST00000380747 TSPAN14Q8NG11 270 aa7.49□□□□□ -1.21
HMGN1-202ENST00000380747 OR51D1Q8NGF3 324 aa7.49□□□□□ -1.21
HMGN1-202ENST00000380747 RFESDQ8TAC1 157 aa7.49□□□□□ -1.21
HMGN1-202ENST00000380747 NDNFQ8TB73 568 aa7.49□□□□□ -1.21
HMGN1-202ENST00000380747 RNF141Q8WVD5 230 aa7.49□□□□□ -1.21
HMGN1-202ENST00000380747 TAF15Q92804 592 aaKnown RBP eCLIP7.49□□□□□ -1.21
HMGN1-202ENST00000380747 NEDD4LQ96PU5 975 aa7.49□□□□□ -1.21
HMGN1-202ENST00000380747 SSX3Q99909 188 aa7.49□□□□□ -1.21
HMGN1-202ENST00000380747 NCOR1P1Q9H4R4 102 aa7.49□□□□□ -1.21
HMGN1-202ENST00000380747 RCC2Q9P258 522 aaKnown RBP7.49□□□□□ -1.21
HMGN1-202ENST00000380747 TRAPPC2LQ9UL33 140 aa7.49□□□□□ -1.21
HMGN1-202ENST00000380747 STUB1Q9UNE7 303 aa7.49□□□□□ -1.21
HMGN1-202ENST00000380747 SSR3Q9UNL2 185 aa7.49□□□□□ -1.21
HMGN1-202ENST00000380747 TBL2Q9Y4P3 447 aaKnown RBP7.49□□□□□ -1.21
HMGN1-202ENST00000380747 A0A087WXM4 84 aa7.48□□□□□ -1.21
HMGN1-202ENST00000380747 LOC100506127A0A0U1RQW1 187 aa7.48□□□□□ -1.21
HMGN1-202ENST00000380747 SHISA3A0PJX4 238 aa7.48□□□□□ -1.21
HMGN1-202ENST00000380747 SMIM30A4D0T7 59 aa7.48□□□□□ -1.21
HMGN1-202ENST00000380747 TMEM14DPA8MWL7 114 aa7.48□□□□□ -1.21
HMGN1-202ENST00000380747 H3BUX3 64 aa7.48□□□□□ -1.21
HMGN1-202ENST00000380747 TOR1AO14656 332 aa7.48□□□□□ -1.21
HMGN1-202ENST00000380747 GPR137BO60478 399 aa7.48□□□□□ -1.21
HMGN1-202ENST00000380747 IL1AP01583 271 aa7.48□□□□□ -1.21
HMGN1-202ENST00000380747 MT-ND4P03905 459 aa7.48□□□□□ -1.21
HMGN1-202ENST00000380747 HKR1P10072 659 aa7.48□□□□□ -1.21
HMGN1-202ENST00000380747 RAB3BP20337 219 aa7.48□□□□□ -1.21
HMGN1-202ENST00000380747 GZMHP20718 246 aa7.48□□□□□ -1.21
HMGN1-202ENST00000380747 GALP22466 123 aa7.48□□□□□ -1.21
HMGN1-202ENST00000380747 SSTR5P35346 364 aa7.48□□□□□ -1.21
HMGN1-202ENST00000380747 QRFPP83859 136 aa7.48□□□□□ -1.21
HMGN1-202ENST00000380747 PAX5Q02548 391 aa7.48□□□□□ -1.21
HMGN1-202ENST00000380747 FAM189A2Q15884 450 aa7.48□□□□□ -1.21
HMGN1-202ENST00000380747 SSX2Q16385 188 aa7.48□□□□□ -1.21
HMGN1-202ENST00000380747 LY6EQ16553 131 aa7.48□□□□□ -1.21
HMGN1-202ENST00000380747 SYT6Q5T7P8 510 aaPredicted RBP7.48□□□□□ -1.21
HMGN1-202ENST00000380747 SIGIRRQ6IA17 410 aa7.48□□□□□ -1.21
HMGN1-202ENST00000380747 ZNF497Q6ZNH5 498 aa7.48□□□□□ -1.21
HMGN1-202ENST00000380747 OR2W3Q7Z3T1 314 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms