RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 PRR32B1ATL7 298 aa8.12□□□□□ -1.11
PTPRA-204ENST00000380393 LINC01565O15544 149 aa8.12□□□□□ -1.11
PTPRA-204ENST00000380393 TACSTD2P09758 323 aa8.12□□□□□ -1.11
PTPRA-204ENST00000380393 ERGP11308 486 aa8.12□□□□□ -1.11
PTPRA-204ENST00000380393 GATA3P23771 443 aa8.12□□□□□ -1.11
PTPRA-204ENST00000380393 IL12BP29460 328 aa8.12□□□□□ -1.11
PTPRA-204ENST00000380393 LILRA6Q6PI73 481 aa8.12□□□□□ -1.11
PTPRA-204ENST00000380393 ADGRE4PQ86SQ3 457 aa8.12□□□□□ -1.11
PTPRA-204ENST00000380393 SMIM20Q8N5G0 67 aa8.12□□□□□ -1.11
PTPRA-204ENST00000380393 SCGB3A2Q96PL1 93 aa8.12□□□□□ -1.11
PTPRA-204ENST00000380393 LRRC61Q9BV99 259 aa8.12□□□□□ -1.11
PTPRA-204ENST00000380393 IL21Q9HBE4 155 aa8.12□□□□□ -1.11
PTPRA-204ENST00000380393 PRSS16Q9NQE7 514 aa8.12□□□□□ -1.11
PTPRA-204ENST00000380393 CISD1Q9NZ45 108 aaKnown RBP8.12□□□□□ -1.11
PTPRA-204ENST00000380393 SLC22A13Q9Y226 551 aa8.12□□□□□ -1.11
PTPRA-204ENST00000380393 TRBV5-7A0A0A0MS05 114 aa8.12□□□□□ -1.11
PTPRA-204ENST00000380393 DPRXA6NFQ7 191 aa8.12□□□□□ -1.11
PTPRA-204ENST00000380393 LRRC3CA6NJW4 275 aa8.12□□□□□ -1.11
PTPRA-204ENST00000380393 NTSR1P30989 418 aa8.12□□□□□ -1.11
PTPRA-204ENST00000380393 SRP14P37108 136 aaKnown RBP8.12□□□□□ -1.11
PTPRA-204ENST00000380393 RELBQ01201 579 aa8.12□□□□□ -1.11
PTPRA-204ENST00000380393 CCDC71LQ8N9Z2 235 aa8.12□□□□□ -1.11
PTPRA-204ENST00000380393 VN1R2Q8NFZ6 395 aa8.12□□□□□ -1.11
PTPRA-204ENST00000380393 RPS4Y2Q8TD47 263 aa8.12□□□□□ -1.11
PTPRA-204ENST00000380393 BLNKQ8WV28 456 aa8.12□□□□□ -1.11
PTPRA-204ENST00000380393 RBM24Q9BX46 236 aaKnown RBP8.12□□□□□ -1.11
PTPRA-204ENST00000380393 BCL2L10Q9HD36 194 aa8.12□□□□□ -1.11
PTPRA-204ENST00000380393 PSG8Q9UQ74 426 aa8.12□□□□□ -1.11
PTPRA-204ENST00000380393 OR11H12B2RN74 326 aa8.11□□□□□ -1.11
PTPRA-204ENST00000380393 RPL23P62829 140 aaKnown RBP8.11□□□□□ -1.11
PTPRA-204ENST00000380393 PDGFRLQ15198 375 aa8.11□□□□□ -1.11
PTPRA-204ENST00000380393 SPIN3Q5JUX0 258 aa8.11□□□□□ -1.11
PTPRA-204ENST00000380393 WDR74Q6RFH5 385 aaPredicted RBP8.11□□□□□ -1.11
PTPRA-204ENST00000380393 CYP2G1PQ6ZSU1 146 aa8.11□□□□□ -1.11
PTPRA-204ENST00000380393 TCF23Q7RTU1 214 aa8.11□□□□□ -1.11
PTPRA-204ENST00000380393 NEGR1Q7Z3B1 354 aa8.11□□□□□ -1.11
PTPRA-204ENST00000380393 TCEAL8Q8IYN2 117 aa8.11□□□□□ -1.11
PTPRA-204ENST00000380393 OR11H1Q8NG94 326 aa8.11□□□□□ -1.11
PTPRA-204ENST00000380393 OR11H2Q8NH07 326 aa8.11□□□□□ -1.11
PTPRA-204ENST00000380393 GLYATL1Q969I3 302 aa8.11□□□□□ -1.11
PTPRA-204ENST00000380393 MRPL24Q96A35 216 aaKnown RBP8.11□□□□□ -1.11
PTPRA-204ENST00000380393 FER1L6-AS2Q96M78 137 aa8.11□□□□□ -1.11
PTPRA-204ENST00000380393 LMF2Q9BU23 707 aaKnown RBP8.11□□□□□ -1.11
PTPRA-204ENST00000380393 FNDC4Q9H6D8 234 aaPredicted RBP8.11□□□□□ -1.11
PTPRA-204ENST00000380393 TUBD1Q9UJT1 453 aa8.11□□□□□ -1.11
PTPRA-204ENST00000380393 TSSC4Q9Y5U2 329 aaPredicted RBP8.11□□□□□ -1.11
PTPRA-204ENST00000380393 HS3ST3A1Q9Y663 406 aa8.11□□□□□ -1.11
PTPRA-204ENST00000380393 GAGE12HA6NDE8 117 aa8.11□□□□□ -1.11
PTPRA-204ENST00000380393 METTL12A8MUP2 240 aa8.11□□□□□ -1.11
PTPRA-204ENST00000380393 HNRNPA2B1P22626 353 aaKnown RBP8.11□□□□□ -1.11
PTPRA-204ENST00000380393 AMTP48728 403 aa8.11□□□□□ -1.11
PTPRA-204ENST00000380393 LCN2P80188 198 aa8.11□□□□□ -1.11
PTPRA-204ENST00000380393 DUSP2Q05923 314 aa8.11□□□□□ -1.11
PTPRA-204ENST00000380393 UBE2E3Q969T4 207 aa8.11□□□□□ -1.11
PTPRA-204ENST00000380393 PSMG3Q9BT73 122 aaPredicted RBP8.11□□□□□ -1.11
PTPRA-204ENST00000380393 NRN1Q9NPD7 142 aa8.11□□□□□ -1.11
PTPRA-204ENST00000380393 CLDND1Q9NY35 253 aa8.11□□□□□ -1.11
PTPRA-204ENST00000380393 DCDC2BA2VCK2 349 aa8.11□□□□□ -1.11
PTPRA-204ENST00000380393 FIGNL2A6NMB9 653 aa8.11□□□□□ -1.11
PTPRA-204ENST00000380393 H2BFMP0C1H6 154 aa8.11□□□□□ -1.11
PTPRA-204ENST00000380393 AADACP22760 399 aa8.11□□□□□ -1.11
PTPRA-204ENST00000380393 OPRM1P35372 400 aa8.11□□□□□ -1.11
PTPRA-204ENST00000380393 CYB561P49447 251 aa8.11□□□□□ -1.11
PTPRA-204ENST00000380393 ATP5J2P56134 94 aa8.11□□□□□ -1.11
PTPRA-204ENST00000380393 GABRA6Q16445 453 aa8.11□□□□□ -1.11
PTPRA-204ENST00000380393 TMEM164Q5U3C3 297 aa8.11□□□□□ -1.11
PTPRA-204ENST00000380393 Q7L0L9 218 aa8.11□□□□□ -1.11
PTPRA-204ENST00000380393 OR10V1Q8NGI7 309 aa8.11□□□□□ -1.11
PTPRA-204ENST00000380393 OR4A5Q8NH83 315 aa8.11□□□□□ -1.11
PTPRA-204ENST00000380393 AP1S3Q96PC3 154 aa8.11□□□□□ -1.11
PTPRA-204ENST00000380393 YAE1D1Q9NRH1 226 aa8.11□□□□□ -1.11
PTPRA-204ENST00000380393 F5P12259 2224 aa8.11□□□□□ -1.11
PTPRA-204ENST00000380393 IGLV3-16A0A075B6K0 115 aa8.1□□□□□ -1.11
PTPRA-204ENST00000380393 ZNF207O43670 478 aaKnown RBP8.1□□□□□ -1.11
PTPRA-204ENST00000380393 SMIM17P0DL12 118 aa8.1□□□□□ -1.11
PTPRA-204ENST00000380393 PNMTP11086 282 aa8.1□□□□□ -1.11
PTPRA-204ENST00000380393 AESQ08117 197 aa8.1□□□□□ -1.11
PTPRA-204ENST00000380393 BVES-AS1Q5T3Y7 98 aa8.1□□□□□ -1.11
PTPRA-204ENST00000380393 SLC18B1Q6NT16 456 aa8.1□□□□□ -1.11
PTPRA-204ENST00000380393 ANAPC16Q96DE5 110 aa8.1□□□□□ -1.11
PTPRA-204ENST00000380393 LRRC3BQ96PB8 259 aa8.1□□□□□ -1.11
PTPRA-204ENST00000380393 FANCMQ8IYD8 2048 aa8.1□□□□□ -1.11
PTPRA-204ENST00000380393 A0A0G2JMM0 328 aa8.1□□□□□ -1.11
PTPRA-204ENST00000380393 A0A1W2PPB8 328 aa8.1□□□□□ -1.11
PTPRA-204ENST00000380393 DUXBA0A1W2PPF3 345 aa8.1□□□□□ -1.11
PTPRA-204ENST00000380393 KIR3DP1A8MWS1 328 aa8.1□□□□□ -1.11
PTPRA-204ENST00000380393 J3QR06 171 aa8.1□□□□□ -1.11
PTPRA-204ENST00000380393 PMCHP20382 165 aa8.1□□□□□ -1.11
PTPRA-204ENST00000380393 MTCP1P56278 107 aa8.1□□□□□ -1.11
PTPRA-204ENST00000380393 RUNX1Q01196 453 aa8.1□□□□□ -1.11
PTPRA-204ENST00000380393 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.1□□□□□ -1.11
PTPRA-204ENST00000380393 STUMQ69YW2 141 aa8.1□□□□□ -1.11
PTPRA-204ENST00000380393 INO80CQ6PI98 192 aaPredicted RBP8.1□□□□□ -1.11
PTPRA-204ENST00000380393 FAM58AQ8N1B3 248 aa8.1□□□□□ -1.11
PTPRA-204ENST00000380393 OR2M3Q8NG83 312 aa8.1□□□□□ -1.11
PTPRA-204ENST00000380393 ZNRF4Q8WWF5 429 aa8.1□□□□□ -1.11
PTPRA-204ENST00000380393 DMDP11532 3685 aa8.1□□□□□ -1.11
PTPRA-204ENST00000380393 SHISA8B8ZZ34 492 aa8.1□□□□□ -1.11
PTPRA-204ENST00000380393 CLDN1O95832 211 aa8.1□□□□□ -1.11
PTPRA-204ENST00000380393 IFNA5P01569 189 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms