RNA–Protein interactions for RNA: ENST00000376646.3

VPS13A-206, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5 BASIC

Gene VPS13A, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-206ENST00000376646 RAB3GAP2Q9H2M9 1393 aa0.99□□□□□ -2.25
VPS13A-206ENST00000376646 USP42Q9H9J4 1324 aaKnown RBP0.99□□□□□ -2.25
VPS13A-206ENST00000376646 TMEM250H0YL14 139 aa0.99□□□□□ -2.25
VPS13A-206ENST00000376646 MKRN2OSH3BPM6 223 aa0.99□□□□□ -2.25
VPS13A-206ENST00000376646 AQP9O43315 295 aa0.99□□□□□ -2.25
VPS13A-206ENST00000376646 GPR75O95800 540 aa0.99□□□□□ -2.25
VPS13A-206ENST00000376646 ZNF708P17019 499 aa0.99□□□□□ -2.25
VPS13A-206ENST00000376646 AKR1C4P17516 323 aa0.99□□□□□ -2.25
VPS13A-206ENST00000376646 ATF1P18846 271 aa0.99□□□□□ -2.25
VPS13A-206ENST00000376646 ACTR1BP42025 376 aa0.99□□□□□ -2.25
VPS13A-206ENST00000376646 MP68P56378 58 aa0.99□□□□□ -2.25
VPS13A-206ENST00000376646 DHRS2Q13268 280 aa0.99□□□□□ -2.25
VPS13A-206ENST00000376646 TCF23Q7RTU1 214 aa0.99□□□□□ -2.25
VPS13A-206ENST00000376646 RPRMLQ8N4K4 120 aa0.99□□□□□ -2.25
VPS13A-206ENST00000376646 C3orf22Q8N5N4 141 aa0.99□□□□□ -2.25
VPS13A-206ENST00000376646 FER1L6-AS1Q8NA97 138 aa0.99□□□□□ -2.25
VPS13A-206ENST00000376646 ATP6V1C2Q8NEY4 427 aa0.99□□□□□ -2.25
VPS13A-206ENST00000376646 BPIFB6Q8NFQ5 453 aa0.99□□□□□ -2.25
VPS13A-206ENST00000376646 CMTM2Q8TAZ6 248 aa0.99□□□□□ -2.25
VPS13A-206ENST00000376646 PYURFQ96I23 114 aa0.99□□□□□ -2.25
VPS13A-206ENST00000376646 FAM210AQ96ND0 272 aa0.99□□□□□ -2.25
VPS13A-206ENST00000376646 PRSS27Q9BQR3 290 aa0.99□□□□□ -2.25
VPS13A-206ENST00000376646 NDEL1Q9GZM8 345 aa0.99□□□□□ -2.25
VPS13A-206ENST00000376646 CHMP4BQ9H444 224 aaKnown RBP0.99□□□□□ -2.25
VPS13A-206ENST00000376646 KCNIP2Q9NS61 270 aa0.99□□□□□ -2.25
VPS13A-206ENST00000376646 DMAC2Q9NW81 257 aa0.99□□□□□ -2.25
VPS13A-206ENST00000376646 OR5V1Q9UGF6 321 aa0.99□□□□□ -2.25
VPS13A-206ENST00000376646 NAGKQ9UJ70 344 aa0.99□□□□□ -2.25
VPS13A-206ENST00000376646 PHLDA3Q9Y5J5 127 aa0.99□□□□□ -2.25
VPS13A-206ENST00000376646 NACADO15069 1562 aa0.98□□□□□ -2.25
VPS13A-206ENST00000376646 YLPM1P49750 1951 aaKnown RBP0.98□□□□□ -2.25
VPS13A-206ENST00000376646 IGKV1D-37A0A075B6S9 117 aa0.98□□□□□ -2.25
VPS13A-206ENST00000376646 D6RAR5 112 aa0.98□□□□□ -2.25
VPS13A-206ENST00000376646 J3QLI3 93 aa0.98□□□□□ -2.25
VPS13A-206ENST00000376646 EEF1E1O43324 174 aaKnown RBP0.98□□□□□ -2.25
VPS13A-206ENST00000376646 SYNGR2O43760 224 aa0.98□□□□□ -2.25
VPS13A-206ENST00000376646 SCN2BO60939 215 aa0.98□□□□□ -2.25
VPS13A-206ENST00000376646 CBR3O75828 277 aa0.98□□□□□ -2.25
VPS13A-206ENST00000376646 CDK14O94921 469 aa0.98□□□□□ -2.25
VPS13A-206ENST00000376646 GYPCP04921 128 aa0.98□□□□□ -2.25
VPS13A-206ENST00000376646 GUSBP08236 651 aa0.98□□□□□ -2.25
VPS13A-206ENST00000376646 RCVRNP35243 200 aa0.98□□□□□ -2.25
VPS13A-206ENST00000376646 CD151P48509 253 aa0.98□□□□□ -2.25
VPS13A-206ENST00000376646 MMDQ15546 238 aa0.98□□□□□ -2.25
VPS13A-206ENST00000376646 ZNHIT3Q15649 155 aaPredicted RBP0.98□□□□□ -2.25
VPS13A-206ENST00000376646 ZCWPW2Q504Y3 356 aa0.98□□□□□ -2.25
VPS13A-206ENST00000376646 RBM48Q5RL73 367 aaKnown RBP0.98□□□□□ -2.25
VPS13A-206ENST00000376646 CRLF3Q8IUI8 442 aa0.98□□□□□ -2.25
VPS13A-206ENST00000376646 MUC15Q8N387 334 aa0.98□□□□□ -2.25
VPS13A-206ENST00000376646 OR11L1Q8NGX0 322 aa0.98□□□□□ -2.25
VPS13A-206ENST00000376646 SPPL2BQ8TCT7 592 aa0.98□□□□□ -2.25
VPS13A-206ENST00000376646 DYNC2LI1Q8TCX1 351 aa0.98□□□□□ -2.25
VPS13A-206ENST00000376646 CCDC12Q8WUD4 166 aaPredicted RBP0.98□□□□□ -2.25
VPS13A-206ENST00000376646 KCTD4Q8WVF5 259 aa0.98□□□□□ -2.25
VPS13A-206ENST00000376646 OR5P3Q8WZ94 311 aa0.98□□□□□ -2.25
VPS13A-206ENST00000376646 CMBLQ96DG6 245 aa0.98□□□□□ -2.25
VPS13A-206ENST00000376646 HBEGFQ99075 208 aa0.98□□□□□ -2.25
VPS13A-206ENST00000376646 PKMYT1Q99640 499 aa0.98□□□□□ -2.25
VPS13A-206ENST00000376646 B9D2Q9BPU9 175 aa0.98□□□□□ -2.25
VPS13A-206ENST00000376646 ALX4Q9H161 411 aaPredicted RBP0.98□□□□□ -2.25
VPS13A-206ENST00000376646 COMMD9Q9P000 198 aa0.98□□□□□ -2.25
VPS13A-206ENST00000376646 CD300AQ9UGN4 299 aa0.98□□□□□ -2.25
VPS13A-206ENST00000376646 SCML1Q9UN30 329 aa0.98□□□□□ -2.25
VPS13A-206ENST00000376646 ARAP3Q8WWN8 1544 aa0.98□□□□□ -2.25
VPS13A-206ENST00000376646 DHX57Q6P158 1386 aaKnown RBP0.98□□□□□ -2.25
VPS13A-206ENST00000376646 LTBP4Q8N2S1 1624 aa0.98□□□□□ -2.25
VPS13A-206ENST00000376646 MAP3K19Q56UN5 1328 aa0.98□□□□□ -2.25
VPS13A-206ENST00000376646 C9J4A7 227 aa0.98□□□□□ -2.25
VPS13A-206ENST00000376646 RAB36O95755 333 aa0.98□□□□□ -2.25
VPS13A-206ENST00000376646 PVALBP20472 110 aaPredicted RBP0.98□□□□□ -2.25
VPS13A-206ENST00000376646 RAB8AP61006 207 aa0.98□□□□□ -2.25
VPS13A-206ENST00000376646 DMTNQ08495 405 aa0.98□□□□□ -2.25
VPS13A-206ENST00000376646 SKP2Q13309 424 aa0.98□□□□□ -2.25
VPS13A-206ENST00000376646 APOFQ13790 326 aa0.98□□□□□ -2.25
VPS13A-206ENST00000376646 XKRXQ6PP77 449 aa0.98□□□□□ -2.25
VPS13A-206ENST00000376646 LYZL2Q7Z4W2 148 aa0.98□□□□□ -2.25
VPS13A-206ENST00000376646 LRP11Q86VZ4 500 aa0.98□□□□□ -2.25
VPS13A-206ENST00000376646 LYPD6Q86Y78 171 aa0.98□□□□□ -2.25
VPS13A-206ENST00000376646 KRTCAP2Q8N6L1 136 aa0.98□□□□□ -2.25
VPS13A-206ENST00000376646 LY6G5BQ8NDX9 201 aa0.98□□□□□ -2.25
VPS13A-206ENST00000376646 OR5D18Q8NGL1 313 aa0.98□□□□□ -2.25
VPS13A-206ENST00000376646 OR9I1Q8NGQ6 314 aa0.98□□□□□ -2.25
VPS13A-206ENST00000376646 ZNRF2Q8NHG8 242 aa0.98□□□□□ -2.25
VPS13A-206ENST00000376646 DTD1Q8TEA8 209 aa0.98□□□□□ -2.25
VPS13A-206ENST00000376646 LRRC45Q96CN5 670 aa0.98□□□□□ -2.25
VPS13A-206ENST00000376646 ARL6Q9H0F7 186 aa0.98□□□□□ -2.25
VPS13A-206ENST00000376646 C1orf109Q9NX04 203 aa0.98□□□□□ -2.25
VPS13A-206ENST00000376646 SLC23A2Q9UGH3 650 aa0.98□□□□□ -2.25
VPS13A-206ENST00000376646 MCTS1Q9ULC4 181 aaKnown RBP0.98□□□□□ -2.25
VPS13A-206ENST00000376646 GMEB1Q9Y692 573 aa0.98□□□□□ -2.25
VPS13A-206ENST00000376646 NUP153P49790 1475 aaKnown RBP0.97□□□□□ -2.25
VPS13A-206ENST00000376646 ZNF462Q96JM2 2506 aa0.97□□□□□ -2.25
VPS13A-206ENST00000376646 TRBV24-1A0A075B6N3 115 aa0.97□□□□□ -2.25
VPS13A-206ENST00000376646 IGKV1-12A0A0C4DH73 117 aa0.97□□□□□ -2.25
VPS13A-206ENST00000376646 F8VZ95 297 aa0.97□□□□□ -2.25
VPS13A-206ENST00000376646 K7EQS6 105 aa0.97□□□□□ -2.25
VPS13A-206ENST00000376646 TOR1AO14656 332 aa0.97□□□□□ -2.25
VPS13A-206ENST00000376646 ASS1P00966 412 aaKnown RBP0.97□□□□□ -2.25
VPS13A-206ENST00000376646 IGKV1D-12P01611 117 aa0.97□□□□□ -2.25
VPS13A-206ENST00000376646 INPP1P49441 399 aa0.97□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms