RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 CRISP2P16562 243 aa15.9■□□□□ 0.14
SNX27-202ENST00000368841 NPAS1Q99742 590 aa15.9■□□□□ 0.14
SNX27-202ENST00000368841 ZNF253O75346 499 aa15.89■□□□□ 0.14
SNX27-202ENST00000368841 RAC3P60763 192 aa15.89■□□□□ 0.14
SNX27-202ENST00000368841 OR1N2Q8NGR9 330 aa15.89■□□□□ 0.14
SNX27-202ENST00000368841 DOCK5Q9H7D0 1870 aa15.89■□□□□ 0.13
SNX27-202ENST00000368841 APCSP02743 223 aa15.89■□□□□ 0.13
SNX27-202ENST00000368841 PRF1P14222 555 aa15.89■□□□□ 0.13
SNX27-202ENST00000368841 RHBDD2Q6NTF9 364 aa15.89■□□□□ 0.13
SNX27-202ENST00000368841 ADAMTSL1Q8N6G6 1762 aa15.89■□□□□ 0.13
SNX27-202ENST00000368841 TBX19O60806 448 aa15.89■□□□□ 0.13
SNX27-202ENST00000368841 PHYHIPLQ96FC7 376 aa15.89■□□□□ 0.13
SNX27-202ENST00000368841 F12P00748 615 aaPredicted RBP15.89■□□□□ 0.13
SNX27-202ENST00000368841 EFNB2P52799 333 aa15.89■□□□□ 0.13
SNX27-202ENST00000368841 RCC2Q9P258 522 aaKnown RBP15.89■□□□□ 0.13
SNX27-202ENST00000368841 ANXA10Q9UJ72 324 aa15.89■□□□□ 0.13
SNX27-202ENST00000368841 PRRC2BQ5JSZ5 2229 aaKnown RBP15.89■□□□□ 0.13
SNX27-202ENST00000368841 CLDN14O95500 239 aa15.89■□□□□ 0.13
SNX27-202ENST00000368841 CXCL3P19876 107 aa15.89■□□□□ 0.13
SNX27-202ENST00000368841 HCP5Q6MZN7 132 aa15.89■□□□□ 0.13
SNX27-202ENST00000368841 TCTEX1D1Q8N7M0 179 aa15.89■□□□□ 0.13
SNX27-202ENST00000368841 REG1AP05451 166 aa15.89■□□□□ 0.13
SNX27-202ENST00000368841 CST2P09228 141 aa15.89■□□□□ 0.13
SNX27-202ENST00000368841 UQCC3Q6UW78 93 aa15.89■□□□□ 0.13
SNX27-202ENST00000368841 OR2Y1Q8NGV0 311 aa15.89■□□□□ 0.13
SNX27-202ENST00000368841 LEAP2Q969E1 77 aa15.89■□□□□ 0.13
SNX27-202ENST00000368841 ZNF385AQ96PM9 386 aaKnown RBP15.89■□□□□ 0.13
SNX27-202ENST00000368841 GPHA2Q96T91 129 aa15.89■□□□□ 0.13
SNX27-202ENST00000368841 NUBP1P53384 320 aa15.88■□□□□ 0.13
SNX27-202ENST00000368841 CLDN18P56856 261 aa15.88■□□□□ 0.13
SNX27-202ENST00000368841 OR10G8Q8NGN5 311 aa15.88■□□□□ 0.13
SNX27-202ENST00000368841 ZNF502Q8TBZ5 544 aa15.88■□□□□ 0.13
SNX27-202ENST00000368841 MYOZ3Q8TDC0 251 aa15.88■□□□□ 0.13
SNX27-202ENST00000368841 ABHD14BQ96IU4 210 aa15.88■□□□□ 0.13
SNX27-202ENST00000368841 TMEM50BP56557 158 aa15.88■□□□□ 0.13
SNX27-202ENST00000368841 GBGT1Q8N5D6 347 aa15.88■□□□□ 0.13
SNX27-202ENST00000368841 MS4A3Q96HJ5 214 aa15.88■□□□□ 0.13
SNX27-202ENST00000368841 SLC17A5Q9NRA2 495 aa15.88■□□□□ 0.13
SNX27-202ENST00000368841 DLX1P56177 255 aa15.88■□□□□ 0.13
SNX27-202ENST00000368841 C9orf40Q8IXQ3 194 aa15.88■□□□□ 0.13
SNX27-202ENST00000368841 RFLNBQ8N5W9 214 aa15.88■□□□□ 0.13
SNX27-202ENST00000368841 SEC11CQ9BY50 192 aa15.88■□□□□ 0.13
SNX27-202ENST00000368841 JMJD6Q6NYC1 403 aaPredicted RBP15.88■□□□□ 0.13
SNX27-202ENST00000368841 SUCLG1P53597 346 aaKnown RBP15.88■□□□□ 0.13
SNX27-202ENST00000368841 ALG14Q96F25 216 aa15.88■□□□□ 0.13
SNX27-202ENST00000368841 ZNF552Q9H707 407 aaPredicted RBP15.88■□□□□ 0.13
SNX27-202ENST00000368841 MANBALQ9NQG1 85 aa15.88■□□□□ 0.13
SNX27-202ENST00000368841 IL36RNQ9UBH0 155 aa15.88■□□□□ 0.13
SNX27-202ENST00000368841 CENPVL1A0A0U1RR11 272 aa15.87■□□□□ 0.13
SNX27-202ENST00000368841 DUXBA0A1W2PPF3 345 aa15.87■□□□□ 0.13
SNX27-202ENST00000368841 AP4M1O00189 453 aa15.87■□□□□ 0.13
SNX27-202ENST00000368841 ZNF324O75467 553 aaPredicted RBP15.87■□□□□ 0.13
SNX27-202ENST00000368841 TMEM52Q8NDY8 209 aa15.87■□□□□ 0.13
SNX27-202ENST00000368841 SNRNP40Q96DI7 357 aaKnown RBP15.87■□□□□ 0.13
SNX27-202ENST00000368841 HERVK_113P61574 105 aa15.87■□□□□ 0.13
SNX27-202ENST00000368841 PSG6Q00889 435 aa15.87■□□□□ 0.13
SNX27-202ENST00000368841 VN1R17PQ8TDU5 208 aa15.87■□□□□ 0.13
SNX27-202ENST00000368841 COX14Q96I36 57 aa15.87■□□□□ 0.13
SNX27-202ENST00000368841 MPC1Q9Y5U8 109 aa15.87■□□□□ 0.13
SNX27-202ENST00000368841 CYB5R3P00387 301 aaPredicted RBP15.87■□□□□ 0.13
SNX27-202ENST00000368841 CLLU1Q5K131 121 aa15.87■□□□□ 0.13
SNX27-202ENST00000368841 ATP1A1-AS1Q5TC04 95 aa15.87■□□□□ 0.13
SNX27-202ENST00000368841 OR4C12Q96R67 309 aa15.87■□□□□ 0.13
SNX27-202ENST00000368841 PAM16Q9Y3D7 125 aa15.87■□□□□ 0.13
SNX27-202ENST00000368841 IGLV3-16A0A075B6K0 115 aa15.87■□□□□ 0.13
SNX27-202ENST00000368841 IGKV3-20P01619 116 aa15.87■□□□□ 0.13
SNX27-202ENST00000368841 GP1BAP07359 652 aa15.87■□□□□ 0.13
SNX27-202ENST00000368841 ZIC1Q15915 447 aa15.87■□□□□ 0.13
SNX27-202ENST00000368841 RRN3P1Q2M238 152 aa15.87■□□□□ 0.13
SNX27-202ENST00000368841 KHDC3LQ587J8 217 aa15.87■□□□□ 0.13
SNX27-202ENST00000368841 ATG4DQ86TL0 474 aaPredicted RBP15.87■□□□□ 0.13
SNX27-202ENST00000368841 PRSS50Q9UI38 385 aa15.87■□□□□ 0.13
SNX27-202ENST00000368841 KLHDC2Q9Y2U9 406 aa15.87■□□□□ 0.13
SNX27-202ENST00000368841 TRAV8-7A0A075B6U6 113 aa15.87■□□□□ 0.13
SNX27-202ENST00000368841 PPYP01298 95 aa15.87■□□□□ 0.13
SNX27-202ENST00000368841 PEBP1P30086 187 aaKnown RBP15.87■□□□□ 0.13
SNX27-202ENST00000368841 ADAT3Q96EY9 351 aaPredicted RBP15.87■□□□□ 0.13
SNX27-202ENST00000368841 ST6GAL2Q96JF0 529 aa15.87■□□□□ 0.13
SNX27-202ENST00000368841 FAM181BA6NEQ2 426 aa15.87■□□□□ 0.13
SNX27-202ENST00000368841 EWSR1Q01844 656 aaKnown RBP eCLIP15.87■□□□□ 0.13
SNX27-202ENST00000368841 BHLHA9Q7RTU4 235 aa15.87■□□□□ 0.13
SNX27-202ENST00000368841 IGSF23A1L1A6 192 aa15.86■□□□□ 0.13
SNX27-202ENST00000368841 RGS13O14921 159 aa15.86■□□□□ 0.13
SNX27-202ENST00000368841 LGALSLQ3ZCW2 172 aaPredicted RBP15.86■□□□□ 0.13
SNX27-202ENST00000368841 PF4V1P10720 104 aa15.86■□□□□ 0.13
SNX27-202ENST00000368841 BSXQ3C1V8 233 aa15.86■□□□□ 0.13
SNX27-202ENST00000368841 C16orf92Q96LL3 132 aa15.86■□□□□ 0.13
SNX27-202ENST00000368841 TMEM167BQ9NRX6 74 aa15.86■□□□□ 0.13
SNX27-202ENST00000368841 CYB5R1Q9UHQ9 305 aa15.86■□□□□ 0.13
SNX27-202ENST00000368841 MMP9P14780 707 aa15.86■□□□□ 0.13
SNX27-202ENST00000368841 COMPP49747 757 aaPredicted RBP15.86■□□□□ 0.13
SNX27-202ENST00000368841 GAB4Q2WGN9 574 aa15.86■□□□□ 0.13
SNX27-202ENST00000368841 PERPQ96FX8 193 aa15.86■□□□□ 0.13
SNX27-202ENST00000368841 PAPPAQ13219 1627 aa15.86■□□□□ 0.13
SNX27-202ENST00000368841 SNURFLB1AK76 121 aa15.86■□□□□ 0.13
SNX27-202ENST00000368841 IGHV3-23P01764 117 aa15.86■□□□□ 0.13
SNX27-202ENST00000368841 ELOBQ15370 118 aa15.86■□□□□ 0.13
SNX27-202ENST00000368841 KCNMB1Q16558 191 aa15.86■□□□□ 0.13
SNX27-202ENST00000368841 RNF122Q9H9V4 155 aa15.86■□□□□ 0.13
SNX27-202ENST00000368841 WBP1LQ9NX94 342 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms