RNA–Protein interactions for RNA: ENST00000367694.2

RC3H1-202, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene RC3H1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-202ENST00000367694 ABHD16AO95870 558 aa4.24□□□□□ -1.73
RC3H1-202ENST00000367694 NUDT3O95989 172 aa4.24□□□□□ -1.73
RC3H1-202ENST00000367694 DANCRP0C864 163 aa4.24□□□□□ -1.73
RC3H1-202ENST00000367694 GAGE12FP0CL80 117 aa4.24□□□□□ -1.73
RC3H1-202ENST00000367694 GAGE12GP0CL81 117 aa4.24□□□□□ -1.73
RC3H1-202ENST00000367694 GAGE12IP0CL82 117 aa4.24□□□□□ -1.73
RC3H1-202ENST00000367694 PRSS56P0CW18 603 aa4.24□□□□□ -1.73
RC3H1-202ENST00000367694 RPL15P61313 204 aaKnown RBP4.24□□□□□ -1.73
RC3H1-202ENST00000367694 GAGE4Q13068 117 aa4.24□□□□□ -1.73
RC3H1-202ENST00000367694 PDCD1Q15116 288 aa4.24□□□□□ -1.73
RC3H1-202ENST00000367694 MRPL23Q16540 153 aaKnown RBP4.24□□□□□ -1.73
RC3H1-202ENST00000367694 EMC4Q5J8M3 183 aa4.24□□□□□ -1.73
RC3H1-202ENST00000367694 ZNF648Q5T619 568 aaPredicted RBP4.24□□□□□ -1.73
RC3H1-202ENST00000367694 TMEM215Q68D42 235 aa4.24□□□□□ -1.73
RC3H1-202ENST00000367694 C1QL2Q7Z5L3 287 aa4.24□□□□□ -1.73
RC3H1-202ENST00000367694 TMEM192Q8IY95 271 aa4.24□□□□□ -1.73
RC3H1-202ENST00000367694 ZNF440Q8IYI8 595 aa4.24□□□□□ -1.73
RC3H1-202ENST00000367694 OR5AR1Q8NGP9 310 aa4.24□□□□□ -1.73
RC3H1-202ENST00000367694 SLC35A4Q96G79 324 aa4.24□□□□□ -1.73
RC3H1-202ENST00000367694 TSSK2Q96PF2 358 aa4.24□□□□□ -1.73
RC3H1-202ENST00000367694 DUX3Q96PT4 197 aa4.24□□□□□ -1.73
RC3H1-202ENST00000367694 TSSK6Q9BXA6 273 aa4.24□□□□□ -1.73
RC3H1-202ENST00000367694 GPR174Q9BXC1 333 aa4.24□□□□□ -1.73
RC3H1-202ENST00000367694 VN1R3Q9BXE9 311 aa4.24□□□□□ -1.73
RC3H1-202ENST00000367694 SAMD10Q9BYL1 202 aa4.24□□□□□ -1.73
RC3H1-202ENST00000367694 RHOJQ9H4E5 214 aa4.24□□□□□ -1.73
RC3H1-202ENST00000367694 SPANXB1Q9NS25 103 aaPredicted RBP4.24□□□□□ -1.73
RC3H1-202ENST00000367694 POLDIP2Q9Y2S7 368 aa4.24□□□□□ -1.73
RC3H1-202ENST00000367694 SNX11Q9Y5W9 270 aa4.24□□□□□ -1.73
RC3H1-202ENST00000367694 TRAV36DV7A0A075B6V5 113 aa4.23□□□□□ -1.73
RC3H1-202ENST00000367694 FAM95CA0A1B0GW59 222 aa4.23□□□□□ -1.73
RC3H1-202ENST00000367694 TNFSF11O14788 317 aa4.23□□□□□ -1.73
RC3H1-202ENST00000367694 HIST1H1DP16402 221 aaKnown RBP4.23□□□□□ -1.73
RC3H1-202ENST00000367694 HMGA2P52926 109 aa4.23□□□□□ -1.73
RC3H1-202ENST00000367694 MANFP55145 182 aaKnown RBP4.23□□□□□ -1.73
RC3H1-202ENST00000367694 RAB10P61026 200 aa4.23□□□□□ -1.73
RC3H1-202ENST00000367694 GNB2P62879 340 aa4.23□□□□□ -1.73
RC3H1-202ENST00000367694 EWSR1Q01844 656 aaKnown RBP eCLIP4.23□□□□□ -1.73
RC3H1-202ENST00000367694 ZSWIM7Q19AV6 140 aa4.23□□□□□ -1.73
RC3H1-202ENST00000367694 TP53I3Q53FA7 332 aa4.23□□□□□ -1.73
RC3H1-202ENST00000367694 GLYATL3Q5SZD4 288 aa4.23□□□□□ -1.73
RC3H1-202ENST00000367694 ENPP7Q6UWV6 458 aa4.23□□□□□ -1.73
RC3H1-202ENST00000367694 CRIPAKQ8N1N5 446 aa4.23□□□□□ -1.73
RC3H1-202ENST00000367694 C8orf44Q96CB5 159 aa4.23□□□□□ -1.73
RC3H1-202ENST00000367694 PCED1BQ96HM7 432 aa4.23□□□□□ -1.73
RC3H1-202ENST00000367694 ABHD6Q9BV23 337 aa4.23□□□□□ -1.73
RC3H1-202ENST00000367694 RNF126Q9BV68 326 aa4.23□□□□□ -1.73
RC3H1-202ENST00000367694 DPY30Q9C005 99 aa4.23□□□□□ -1.73
RC3H1-202ENST00000367694 POLR2J2Q9GZM3 115 aaKnown RBP4.23□□□□□ -1.73
RC3H1-202ENST00000367694 ARL15Q9NXU5 204 aa4.23□□□□□ -1.73
RC3H1-202ENST00000367694 KLRF1Q9NZS2 232 aa4.23□□□□□ -1.73
RC3H1-202ENST00000367694 ABRACLQ9P1F3 81 aa4.23□□□□□ -1.73
RC3H1-202ENST00000367694 B9D1Q9UPM9 204 aa4.23□□□□□ -1.73
RC3H1-202ENST00000367694 VDAC3Q9Y277 283 aa4.23□□□□□ -1.73
RC3H1-202ENST00000367694 TTC3P53804 2025 aa4.23□□□□□ -1.73
RC3H1-202ENST00000367694 COL2A1P02458 1487 aaPredicted RBP4.23□□□□□ -1.73
RC3H1-202ENST00000367694 FAM90A20PA6NIJ5 464 aa4.23□□□□□ -1.73
RC3H1-202ENST00000367694 ZNF727A8MUV8 499 aa4.23□□□□□ -1.73
RC3H1-202ENST00000367694 PYCARD-AS1I3L0S3 204 aa4.23□□□□□ -1.73
RC3H1-202ENST00000367694 K7ENP7 123 aa4.23□□□□□ -1.73
RC3H1-202ENST00000367694 PLPP3O14495 311 aa4.23□□□□□ -1.73
RC3H1-202ENST00000367694 CHST1O43916 411 aa4.23□□□□□ -1.73
RC3H1-202ENST00000367694 WISP3O95389 354 aaPredicted RBP4.23□□□□□ -1.73
RC3H1-202ENST00000367694 ZNF682O95780 498 aa4.23□□□□□ -1.73
RC3H1-202ENST00000367694 HLA-HP01893 362 aa4.23□□□□□ -1.73
RC3H1-202ENST00000367694 CD99P14209 185 aa4.23□□□□□ -1.73
RC3H1-202ENST00000367694 RPL24P83731 157 aaKnown RBP4.23□□□□□ -1.73
RC3H1-202ENST00000367694 KLRD1Q13241 179 aa4.23□□□□□ -1.73
RC3H1-202ENST00000367694 DCAF12Q5T6F0 453 aa4.23□□□□□ -1.73
RC3H1-202ENST00000367694 ERASQ7Z444 233 aa4.23□□□□□ -1.73
RC3H1-202ENST00000367694 TSEN54Q7Z6J9 526 aaKnown RBP4.23□□□□□ -1.73
RC3H1-202ENST00000367694 ADGRE4PQ86SQ3 457 aa4.23□□□□□ -1.73
RC3H1-202ENST00000367694 CLEC4CQ8WTT0 213 aa4.23□□□□□ -1.73
RC3H1-202ENST00000367694 TMED6Q8WW62 240 aa4.23□□□□□ -1.73
RC3H1-202ENST00000367694 DDB2Q92466 427 aa4.23□□□□□ -1.73
RC3H1-202ENST00000367694 TMEM54Q969K7 222 aa4.23□□□□□ -1.73
RC3H1-202ENST00000367694 TVP23CQ96ET8 276 aa4.23□□□□□ -1.73
RC3H1-202ENST00000367694 HSPB9Q9BQS6 159 aa4.23□□□□□ -1.73
RC3H1-202ENST00000367694 NMES1Q9C002 83 aa4.23□□□□□ -1.73
RC3H1-202ENST00000367694 OR11A1Q9GZK7 315 aa4.23□□□□□ -1.73
RC3H1-202ENST00000367694 TP53TG3Q9ULZ0 132 aa4.23□□□□□ -1.73
RC3H1-202ENST00000367694 NAV3Q8IVL0 2385 aa4.23□□□□□ -1.73
RC3H1-202ENST00000367694 NUP205Q92621 2012 aa4.23□□□□□ -1.73
RC3H1-202ENST00000367694 NPIPB5A8MRT5 1133 aa4.23□□□□□ -1.73
RC3H1-202ENST00000367694 SIRPB1O00241 398 aa4.23□□□□□ -1.73
RC3H1-202ENST00000367694 RPS12P25398 132 aaKnown RBP4.23□□□□□ -1.73
RC3H1-202ENST00000367694 PPICP45877 212 aa4.23□□□□□ -1.73
RC3H1-202ENST00000367694 DLX6P56179 175 aa4.23□□□□□ -1.73
RC3H1-202ENST00000367694 SPATA45Q537H7 98 aa4.23□□□□□ -1.73
RC3H1-202ENST00000367694 Q6ZN92 141 aa4.23□□□□□ -1.73
RC3H1-202ENST00000367694 CISD2Q8N5K1 135 aaKnown RBP4.23□□□□□ -1.73
RC3H1-202ENST00000367694 ZNF433Q8N7K0 673 aaPredicted RBP4.23□□□□□ -1.73
RC3H1-202ENST00000367694 OR51T1Q8NGJ9 327 aa4.23□□□□□ -1.73
RC3H1-202ENST00000367694 OR4A5Q8NH83 315 aa4.23□□□□□ -1.73
RC3H1-202ENST00000367694 AQP3Q92482 292 aa4.23□□□□□ -1.73
RC3H1-202ENST00000367694 IMP4Q96G21 291 aaKnown RBP4.23□□□□□ -1.73
RC3H1-202ENST00000367694 DERL3Q96Q80 235 aa4.23□□□□□ -1.73
RC3H1-202ENST00000367694 NIPSNAP3BQ9BS92 247 aa4.23□□□□□ -1.73
RC3H1-202ENST00000367694 DUSP16Q9BY84 665 aa4.23□□□□□ -1.73
RC3H1-202ENST00000367694 PRTFDC1Q9NRG1 225 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms