RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 GABRA2P47869 451 aa17.55■□□□□ 0.4
MAP1LC3A-201ENST00000360668 DHODHQ02127 395 aa17.55■□□□□ 0.4
MAP1LC3A-201ENST00000360668 NLRC3Q7RTR2 1065 aa17.55■□□□□ 0.4
MAP1LC3A-201ENST00000360668 TGIF2LYQ8IUE0 185 aa17.55■□□□□ 0.4
MAP1LC3A-201ENST00000360668 OR52B4Q8NGK2 314 aa17.55■□□□□ 0.4
MAP1LC3A-201ENST00000360668 CBLN4Q9NTU7 201 aa17.55■□□□□ 0.4
MAP1LC3A-201ENST00000360668 TMEM178BH3BS89 294 aa17.54■□□□□ 0.4
MAP1LC3A-201ENST00000360668 IGSF11Q5DX21 431 aa17.54■□□□□ 0.4
MAP1LC3A-201ENST00000360668 LYG2Q86SG7 212 aa17.54■□□□□ 0.4
MAP1LC3A-201ENST00000360668 ZNF561Q8N587 486 aa17.54■□□□□ 0.4
MAP1LC3A-201ENST00000360668 CAPSLQ8WWF8 208 aa17.54■□□□□ 0.4
MAP1LC3A-201ENST00000360668 SDSLQ96GA7 329 aa17.54■□□□□ 0.4
MAP1LC3A-201ENST00000360668 COQ2Q96H96 371 aa17.54■□□□□ 0.4
MAP1LC3A-201ENST00000360668 LIME1Q9H400 295 aa17.54■□□□□ 0.4
MAP1LC3A-201ENST00000360668 TMEM106BQ9NUM4 274 aa17.54■□□□□ 0.4
MAP1LC3A-201ENST00000360668 PAIP2BQ9ULR5 123 aaKnown RBP17.54■□□□□ 0.4
MAP1LC3A-201ENST00000360668 USP9YO00507 2555 aaPredicted RBP17.54■□□□□ 0.4
MAP1LC3A-201ENST00000360668 TANC2Q9HCD6 1990 aa17.54■□□□□ 0.4
MAP1LC3A-201ENST00000360668 PTPN13Q12923 2485 aa17.54■□□□□ 0.4
MAP1LC3A-201ENST00000360668 LGALS8O00214 317 aa17.53■□□□□ 0.4
MAP1LC3A-201ENST00000360668 TK1P04183 234 aa17.53■□□□□ 0.4
MAP1LC3A-201ENST00000360668 HLA-GP17693 338 aa17.53■□□□□ 0.4
MAP1LC3A-201ENST00000360668 FCGR2CP31995 323 aa17.53■□□□□ 0.4
MAP1LC3A-201ENST00000360668 DHRS2Q13268 280 aa17.53■□□□□ 0.4
MAP1LC3A-201ENST00000360668 PSMG3-AS1Q96PY0 264 aa17.53■□□□□ 0.4
MAP1LC3A-201ENST00000360668 CABLES2Q9BTV7 478 aa17.53■□□□□ 0.4
MAP1LC3A-201ENST00000360668 C5orf66Q9H5L9 145 aa17.53■□□□□ 0.4
MAP1LC3A-201ENST00000360668 DCAF16Q9NXF7 216 aa17.53■□□□□ 0.4
MAP1LC3A-201ENST00000360668 PIPOXQ9P0Z9 390 aa17.53■□□□□ 0.4
MAP1LC3A-201ENST00000360668 PCDHB10Q9UN67 800 aa17.53■□□□□ 0.4
MAP1LC3A-201ENST00000360668 ABCA4P78363 2273 aa17.53■□□□□ 0.4
MAP1LC3A-201ENST00000360668 K7N7A8 449 aa17.53■□□□□ 0.4
MAP1LC3A-201ENST00000360668 MGST3O14880 152 aa17.53■□□□□ 0.4
MAP1LC3A-201ENST00000360668 RGS11O94810 467 aa17.53■□□□□ 0.4
MAP1LC3A-201ENST00000360668 GOSR1O95249 250 aa17.53■□□□□ 0.4
MAP1LC3A-201ENST00000360668 RNF224P0DH78 156 aa17.53■□□□□ 0.4
MAP1LC3A-201ENST00000360668 SEC61A1P61619 476 aaKnown RBP17.53■□□□□ 0.4
MAP1LC3A-201ENST00000360668 AESQ08117 197 aa17.53■□□□□ 0.4
MAP1LC3A-201ENST00000360668 HERPUD1Q15011 391 aa17.53■□□□□ 0.4
MAP1LC3A-201ENST00000360668 HMGN3Q15651 99 aa17.53■□□□□ 0.4
MAP1LC3A-201ENST00000360668 KRBOX4Q5JUW0 171 aa17.53■□□□□ 0.4
MAP1LC3A-201ENST00000360668 C11orf71Q6IPW1 123 aa17.53■□□□□ 0.4
MAP1LC3A-201ENST00000360668 LPCAT3Q6P1A2 487 aa17.53■□□□□ 0.4
MAP1LC3A-201ENST00000360668 KIF25Q9UIL4 384 aa17.53■□□□□ 0.4
MAP1LC3A-201ENST00000360668 TRAV38-1A0A0B4J264 116 aa17.52■□□□□ 0.39
MAP1LC3A-201ENST00000360668 IGKV1-6A0A0C4DH72 117 aa17.52■□□□□ 0.39
MAP1LC3A-201ENST00000360668 IGHV1-69-2A0A0G2JMI3 117 aa17.52■□□□□ 0.39
MAP1LC3A-201ENST00000360668 C9orf170A2RU37 121 aa17.52■□□□□ 0.39
MAP1LC3A-201ENST00000360668 DIRAS3O95661 229 aa17.52■□□□□ 0.39
MAP1LC3A-201ENST00000360668 PGAM2P15259 253 aa17.52■□□□□ 0.39
MAP1LC3A-201ENST00000360668 TMEM128Q5BJH2 165 aa17.52■□□□□ 0.39
MAP1LC3A-201ENST00000360668 DTX2Q86UW9 622 aa17.52■□□□□ 0.39
MAP1LC3A-201ENST00000360668 OR5D13Q8NGL4 314 aa17.52■□□□□ 0.39
MAP1LC3A-201ENST00000360668 MITD1Q8WV92 249 aa17.52■□□□□ 0.39
MAP1LC3A-201ENST00000360668 CCL17Q92583 94 aa17.52■□□□□ 0.39
MAP1LC3A-201ENST00000360668 MOB3AQ96BX8 217 aa17.52■□□□□ 0.39
MAP1LC3A-201ENST00000360668 VRK1Q99986 396 aaPredicted RBP17.52■□□□□ 0.39
MAP1LC3A-201ENST00000360668 RTBDNQ9BSG5 229 aaPredicted RBP17.52■□□□□ 0.39
MAP1LC3A-201ENST00000360668 TMPRSS13Q9BYE2 586 aa17.52■□□□□ 0.39
MAP1LC3A-201ENST00000360668 ZNF665Q9H7R5 613 aa17.52■□□□□ 0.39
MAP1LC3A-201ENST00000360668 KCNIP1Q9NZI2 227 aa17.52■□□□□ 0.39
MAP1LC3A-201ENST00000360668 MAB21L2Q9Y586 359 aa17.52■□□□□ 0.39
MAP1LC3A-201ENST00000360668 KLF2Q9Y5W3 355 aaPredicted RBP17.52■□□□□ 0.39
MAP1LC3A-201ENST00000360668 PPIAL4EA0A075B759 164 aa17.51■□□□□ 0.39
MAP1LC3A-201ENST00000360668 A0A0B4J2A0 478 aa17.51■□□□□ 0.39
MAP1LC3A-201ENST00000360668 A6NNC1 897 aa17.51■□□□□ 0.39
MAP1LC3A-201ENST00000360668 NPIPB11E5RHQ5 1161 aa17.51■□□□□ 0.39
MAP1LC3A-201ENST00000360668 PPIAL4DF5H284 164 aa17.51■□□□□ 0.39
MAP1LC3A-201ENST00000360668 RGS13O14921 159 aa17.51■□□□□ 0.39
MAP1LC3A-201ENST00000360668 BET1O15155 118 aa17.51■□□□□ 0.39
MAP1LC3A-201ENST00000360668 ZNF205O95201 554 aa17.51■□□□□ 0.39
MAP1LC3A-201ENST00000360668 PPIAL4FP0DN26 164 aa17.51■□□□□ 0.39
MAP1LC3A-201ENST00000360668 DNASE1P24855 282 aa17.51■□□□□ 0.39
MAP1LC3A-201ENST00000360668 UCP3P55916 312 aa17.51■□□□□ 0.39
MAP1LC3A-201ENST00000360668 SRSF4Q08170 494 aaKnown RBP17.51■□□□□ 0.39
MAP1LC3A-201ENST00000360668 MEX3BQ6ZN04 569 aaKnown RBP17.51■□□□□ 0.39
MAP1LC3A-201ENST00000360668 ZNF788Q6ZQV5 615 aa17.51■□□□□ 0.39
MAP1LC3A-201ENST00000360668 C5orf24Q7Z6I8 188 aa17.51■□□□□ 0.39
MAP1LC3A-201ENST00000360668 ADAD2Q8NCV1 583 aaKnown RBP17.51■□□□□ 0.39
MAP1LC3A-201ENST00000360668 DEFB108BQ8NET1 73 aa17.51■□□□□ 0.39
MAP1LC3A-201ENST00000360668 OR2T35Q8NGX2 323 aa17.51■□□□□ 0.39
MAP1LC3A-201ENST00000360668 GAFA1Q96PS6 74 aa17.51■□□□□ 0.39
MAP1LC3A-201ENST00000360668 FXYD6Q9H0Q3 95 aa17.51■□□□□ 0.39
MAP1LC3A-201ENST00000360668 DNTTIP1Q9H147 329 aa17.51■□□□□ 0.39
MAP1LC3A-201ENST00000360668 SHPKQ9UHJ6 478 aa17.51■□□□□ 0.39
MAP1LC3A-201ENST00000360668 PPIAL4AQ9Y536 164 aa17.51■□□□□ 0.39
MAP1LC3A-201ENST00000360668 TRBV6-7A0A0A0MS04 114 aa17.5■□□□□ 0.39
MAP1LC3A-201ENST00000360668 SLC22A5O76082 557 aa17.5■□□□□ 0.39
MAP1LC3A-201ENST00000360668 DUS4LO95620 317 aaKnown RBP17.5■□□□□ 0.39
MAP1LC3A-201ENST00000360668 CD8AP01732 235 aa17.5■□□□□ 0.39
MAP1LC3A-201ENST00000360668 CTSDP07339 412 aaPredicted RBP17.5■□□□□ 0.39
MAP1LC3A-201ENST00000360668 DANCRP0C864 163 aa17.5■□□□□ 0.39
MAP1LC3A-201ENST00000360668 AADACP22760 399 aa17.5■□□□□ 0.39
MAP1LC3A-201ENST00000360668 NFYAP23511 347 aaPredicted RBP17.5■□□□□ 0.39
MAP1LC3A-201ENST00000360668 HERV-K104P61576 105 aa17.5■□□□□ 0.39
MAP1LC3A-201ENST00000360668 IL13RA1P78552 427 aa17.5■□□□□ 0.39
MAP1LC3A-201ENST00000360668 BAMBIQ13145 260 aa17.5■□□□□ 0.39
MAP1LC3A-201ENST00000360668 C6orf183Q5T699 404 aa17.5■□□□□ 0.39
MAP1LC3A-201ENST00000360668 GON7Q9BXV9 100 aa17.5■□□□□ 0.39
MAP1LC3A-201ENST00000360668 RAB1BQ9H0U4 201 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms