RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 GUSBP11Q6P575 273 aa11.3□□□□□ -0.6
SMC4-202ENST00000357388 TUBD1Q9UJT1 453 aa11.3□□□□□ -0.6
SMC4-202ENST00000357388 GNG7O60262 68 aa11.3□□□□□ -0.6
SMC4-202ENST00000357388 KBTBD11O94819 623 aa11.3□□□□□ -0.6
SMC4-202ENST00000357388 LSM6P62312 80 aaKnown RBP11.3□□□□□ -0.6
SMC4-202ENST00000357388 ZNF841Q6ZN19 808 aa11.3□□□□□ -0.6
SMC4-202ENST00000357388 GAPTQ8N292 157 aa11.3□□□□□ -0.6
SMC4-202ENST00000357388 OR4D9Q8NGE8 314 aa11.3□□□□□ -0.6
SMC4-202ENST00000357388 FLYWCH2Q96CP2 140 aaKnown RBP11.3□□□□□ -0.6
SMC4-202ENST00000357388 DEFB108AA8MXU0 73 aa11.3□□□□□ -0.6
SMC4-202ENST00000357388 PLPP3O14495 311 aa11.3□□□□□ -0.6
SMC4-202ENST00000357388 KIR3DL2P43630 455 aa11.3□□□□□ -0.6
SMC4-202ENST00000357388 TNXAQ16473 311 aa11.3□□□□□ -0.6
SMC4-202ENST00000357388 GUCA2BQ16661 112 aa11.3□□□□□ -0.6
SMC4-202ENST00000357388 C9orf50Q5SZB4 431 aa11.3□□□□□ -0.6
SMC4-202ENST00000357388 CYB561D1Q8N8Q1 229 aa11.3□□□□□ -0.6
SMC4-202ENST00000357388 ZNF502Q8TBZ5 544 aa11.3□□□□□ -0.6
SMC4-202ENST00000357388 GUCD1Q96NT3 240 aa11.3□□□□□ -0.6
SMC4-202ENST00000357388 OR5AC2Q9NZP5 309 aa11.3□□□□□ -0.6
SMC4-202ENST00000357388 CA6P23280 308 aa11.3□□□□□ -0.6
SMC4-202ENST00000357388 COX7A1P24310 79 aa11.3□□□□□ -0.6
SMC4-202ENST00000357388 EPHA8P29322 1005 aaPredicted RBP11.3□□□□□ -0.6
SMC4-202ENST00000357388 LRRC29Q8WV35 223 aa11.3□□□□□ -0.6
SMC4-202ENST00000357388 ASB5Q8WWX0 329 aa11.3□□□□□ -0.6
SMC4-202ENST00000357388 C4BP0C0L5 1744 aa11.29□□□□□ -0.6
SMC4-202ENST00000357388 ZNF324O75467 553 aaPredicted RBP11.29□□□□□ -0.6
SMC4-202ENST00000357388 TSPAN13O95857 204 aa11.29□□□□□ -0.6
SMC4-202ENST00000357388 GZMHP20718 246 aa11.29□□□□□ -0.6
SMC4-202ENST00000357388 RPS20P60866 119 aaKnown RBP11.29□□□□□ -0.6
SMC4-202ENST00000357388 Q6ZS52 159 aa11.29□□□□□ -0.6
SMC4-202ENST00000357388 HOGA1Q86XE5 327 aa11.29□□□□□ -0.6
SMC4-202ENST00000357388 ZNF683Q8IZ20 524 aa11.29□□□□□ -0.6
SMC4-202ENST00000357388 OR6X1Q8NH79 312 aa11.29□□□□□ -0.6
SMC4-202ENST00000357388 PTPMT1Q8WUK0 201 aaPredicted RBP11.29□□□□□ -0.6
SMC4-202ENST00000357388 HEXA-AS1Q9H8Q6 139 aa11.29□□□□□ -0.6
SMC4-202ENST00000357388 NPTNQ9Y639 398 aa11.29□□□□□ -0.6
SMC4-202ENST00000357388 KCNE1BA0A087WTH5 132 aa11.29□□□□□ -0.6
SMC4-202ENST00000357388 A0A1B0GV90 55 aa11.29□□□□□ -0.6
SMC4-202ENST00000357388 TMEM50BP56557 158 aa11.29□□□□□ -0.6
SMC4-202ENST00000357388 HYAL1Q12794 435 aa11.29□□□□□ -0.6
SMC4-202ENST00000357388 SPINK9Q5DT21 86 aa11.29□□□□□ -0.6
SMC4-202ENST00000357388 HES3Q5TGS1 186 aa11.29□□□□□ -0.6
SMC4-202ENST00000357388 NKX2-6A6NCS4 301 aa11.29□□□□□ -0.6
SMC4-202ENST00000357388 NPIPB9F8W1W9 429 aa11.29□□□□□ -0.6
SMC4-202ENST00000357388 EIF3GO75821 320 aaKnown RBP eCLIP11.29□□□□□ -0.68e-13■■■■■ 59.2
SMC4-202ENST00000357388 ZNF32P17041 273 aa11.29□□□□□ -0.6
SMC4-202ENST00000357388 LSM10Q969L4 123 aaKnown RBP11.29□□□□□ -0.6
SMC4-202ENST00000357388 RHOVQ96L33 236 aa11.29□□□□□ -0.6
SMC4-202ENST00000357388 SLC6A13Q9NSD5 602 aa11.29□□□□□ -0.6
SMC4-202ENST00000357388 AKAP12Q02952 1782 aa11.29□□□□□ -0.6
SMC4-202ENST00000357388 CROCCQ5TZA2 2017 aa11.29□□□□□ -0.6
SMC4-202ENST00000357388 SMIM13P0DJ93 91 aa11.29□□□□□ -0.6
SMC4-202ENST00000357388 KIAA0040Q15053 153 aa11.29□□□□□ -0.6
SMC4-202ENST00000357388 ARL6IP6Q8N6S5 226 aa11.29□□□□□ -0.6
SMC4-202ENST00000357388 RGP1Q92546 391 aaPredicted RBP11.29□□□□□ -0.6
SMC4-202ENST00000357388 TMEM45BQ96B21 275 aa11.29□□□□□ -0.6
SMC4-202ENST00000357388 SOX21Q9Y651 276 aaPredicted RBP11.29□□□□□ -0.6
SMC4-202ENST00000357388 R4GN57 208 aa11.29□□□□□ -0.6
SMC4-202ENST00000357388 ZXDAP98168 799 aa11.29□□□□□ -0.6
SMC4-202ENST00000357388 FMODQ06828 376 aa11.29□□□□□ -0.6
SMC4-202ENST00000357388 ZNF79Q15937 498 aa11.29□□□□□ -0.6
SMC4-202ENST00000357388 SPANXN1Q5VSR9 72 aa11.29□□□□□ -0.6
SMC4-202ENST00000357388 OTPQ5XKR4 325 aa11.29□□□□□ -0.6
SMC4-202ENST00000357388 MRGPRDQ8TDS7 321 aa11.29□□□□□ -0.6
SMC4-202ENST00000357388 CRYBG1Q9Y4K1 1723 aa11.28□□□□□ -0.6
SMC4-202ENST00000357388 RBFOX2O43251 390 aaKnown RBP eCLIP11.28□□□□□ -0.63e-8■■■■■ 54.1
SMC4-202ENST00000357388 CTSVO60911 334 aa11.28□□□□□ -0.6
SMC4-202ENST00000357388 IL4P05112 153 aa11.28□□□□□ -0.6
SMC4-202ENST00000357388 CIRBPQ14011 172 aaKnown RBP11.28□□□□□ -0.6
SMC4-202ENST00000357388 ZNF774Q6NX45 483 aa11.28□□□□□ -0.6
SMC4-202ENST00000357388 ASB10Q8WXI3 467 aa11.28□□□□□ -0.6
SMC4-202ENST00000357388 MRPS18AQ9NVS2 196 aaKnown RBP11.28□□□□□ -0.6
SMC4-202ENST00000357388 TMEM189A5PLL7 270 aa11.28□□□□□ -0.6
SMC4-202ENST00000357388 TEX30Q5JUR7 227 aa11.28□□□□□ -0.6
SMC4-202ENST00000357388 ANKRD37Q7Z713 158 aa11.28□□□□□ -0.6
SMC4-202ENST00000357388 OR8B12Q8NGG6 310 aa11.28□□□□□ -0.6
SMC4-202ENST00000357388 SSMEM1Q8WWF3 244 aa11.28□□□□□ -0.6
SMC4-202ENST00000357388 PAXXQ9BUH6 204 aa11.28□□□□□ -0.6
SMC4-202ENST00000357388 ABHD14AQ9BUJ0 271 aa11.28□□□□□ -0.6
SMC4-202ENST00000357388 CISD1Q9NZ45 108 aaKnown RBP11.28□□□□□ -0.6
SMC4-202ENST00000357388 CLN8Q9UBY8 286 aa11.28□□□□□ -0.6
SMC4-202ENST00000357388 NPIPB6E9PJ23 425 aa11.28□□□□□ -0.6
SMC4-202ENST00000357388 HOXC4P09017 264 aaPredicted RBP11.28□□□□□ -0.6
SMC4-202ENST00000357388 CXCL2P19875 107 aa11.28□□□□□ -0.6
SMC4-202ENST00000357388 PMELP40967 661 aa11.28□□□□□ -0.6
SMC4-202ENST00000357388 ID1P41134 155 aa11.28□□□□□ -0.6
SMC4-202ENST00000357388 LRRC75BQ2VPJ9 315 aa11.28□□□□□ -0.6
SMC4-202ENST00000357388 C19orf54Q5BKX5 351 aa11.28□□□□□ -0.6
SMC4-202ENST00000357388 ASCL5Q7RTU5 278 aa11.28□□□□□ -0.6
SMC4-202ENST00000357388 CXCL16Q9H2A7 254 aa11.28□□□□□ -0.6
SMC4-202ENST00000357388 IGHV1OR21-1A0A087WYE8 117 aa11.28□□□□□ -0.6
SMC4-202ENST00000357388 LIPFP07098 398 aa11.28□□□□□ -0.6
SMC4-202ENST00000357388 IBA57Q5T440 356 aaKnown RBP11.28□□□□□ -0.6
SMC4-202ENST00000357388 CXorf67Q86X51 503 aaPredicted RBP11.28□□□□□ -0.6
SMC4-202ENST00000357388 MRPL18Q9H0U6 180 aaKnown RBP11.28□□□□□ -0.6
SMC4-202ENST00000357388 KCNK7Q9Y2U2 307 aa11.28□□□□□ -0.6
SMC4-202ENST00000357388 AGFG2O95081 481 aa11.27□□□□□ -0.6
SMC4-202ENST00000357388 FZD5Q13467 585 aa11.27□□□□□ -0.6
SMC4-202ENST00000357388 PDCD1Q15116 288 aa11.27□□□□□ -0.6
SMC4-202ENST00000357388 VAX1Q5SQQ9 334 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms