RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 PRDM13Q9H4Q3 707 aa3.24□□□□□ -1.89
CNOT4-202ENST00000356162 RAB9BQ9NP90 201 aa3.24□□□□□ -1.89
CNOT4-202ENST00000356162 SIRT7Q9NRC8 400 aa3.24□□□□□ -1.89
CNOT4-202ENST00000356162 KIF25Q9UIL4 384 aa3.24□□□□□ -1.89
CNOT4-202ENST00000356162 CSPG4Q6UVK1 2322 aa3.24□□□□□ -1.89
CNOT4-202ENST00000356162 LOC100506127A0A0U1RQW1 187 aa3.24□□□□□ -1.89
CNOT4-202ENST00000356162 TMEM272A0A1B0GTI8 110 aa3.24□□□□□ -1.89
CNOT4-202ENST00000356162 ODF3BA8MYP8 253 aa3.24□□□□□ -1.89
CNOT4-202ENST00000356162 HSPB6O14558 160 aa3.24□□□□□ -1.89
CNOT4-202ENST00000356162 TSPAN15O95858 294 aa3.24□□□□□ -1.89
CNOT4-202ENST00000356162 IGHV1-8P0DP01 117 aa3.24□□□□□ -1.89
CNOT4-202ENST00000356162 ARSBP15848 533 aa3.24□□□□□ -1.89
CNOT4-202ENST00000356162 FUT3P21217 361 aa3.24□□□□□ -1.89
CNOT4-202ENST00000356162 CD34P28906 385 aa3.24□□□□□ -1.89
CNOT4-202ENST00000356162 GLIPR1P48060 266 aa3.24□□□□□ -1.89
CNOT4-202ENST00000356162 ALDH3B2P48448 385 aa3.24□□□□□ -1.89
CNOT4-202ENST00000356162 OR10A3P58181 314 aa3.24□□□□□ -1.89
CNOT4-202ENST00000356162 AESQ08117 197 aa3.24□□□□□ -1.89
CNOT4-202ENST00000356162 MIDNQ504T8 468 aa3.24□□□□□ -1.89
CNOT4-202ENST00000356162 HES5Q5TA89 166 aa3.24□□□□□ -1.89
CNOT4-202ENST00000356162 PRAMEF5Q5TYX0 476 aa3.24□□□□□ -1.89
CNOT4-202ENST00000356162 OR52W1Q6IF63 320 aa3.24□□□□□ -1.89
CNOT4-202ENST00000356162 RAB12Q6IQ22 244 aa3.24□□□□□ -1.89
CNOT4-202ENST00000356162 HEPN1Q6WQI6 88 aa3.24□□□□□ -1.89
CNOT4-202ENST00000356162 ZNF497Q6ZNH5 498 aa3.24□□□□□ -1.89
CNOT4-202ENST00000356162 MOB1BQ7L9L4 216 aa3.24□□□□□ -1.89
CNOT4-202ENST00000356162 RTN4RL2Q86UN3 420 aa3.24□□□□□ -1.89
CNOT4-202ENST00000356162 C11orf42Q8N5U0 333 aa3.24□□□□□ -1.89
CNOT4-202ENST00000356162 TPRX1Q8N7U7 411 aa3.24□□□□□ -1.89
CNOT4-202ENST00000356162 SIGLECL1Q8N7X8 197 aa3.24□□□□□ -1.89
CNOT4-202ENST00000356162 NEK7Q8TDX7 302 aa3.24□□□□□ -1.89
CNOT4-202ENST00000356162 FAM46BQ96A09 425 aa3.24□□□□□ -1.89
CNOT4-202ENST00000356162 PTX4Q96A99 478 aa3.24□□□□□ -1.89
CNOT4-202ENST00000356162 NEDD4LQ96PU5 975 aa3.24□□□□□ -1.89
CNOT4-202ENST00000356162 KRTAP4-9Q9BYQ8 210 aa3.24□□□□□ -1.89
CNOT4-202ENST00000356162 BARHL1Q9BZE3 327 aa3.24□□□□□ -1.89
CNOT4-202ENST00000356162 LPAR5Q9H1C0 372 aa3.24□□□□□ -1.89
CNOT4-202ENST00000356162 LINC00574Q9H8X3 128 aa3.24□□□□□ -1.89
CNOT4-202ENST00000356162 ETAA1Q9NY74 926 aa3.24□□□□□ -1.89
CNOT4-202ENST00000356162 CALYQ9NYX4 217 aa3.24□□□□□ -1.89
CNOT4-202ENST00000356162 ZNF581Q9P0T4 197 aa3.24□□□□□ -1.89
CNOT4-202ENST00000356162 RAB22AQ9UL26 194 aa3.24□□□□□ -1.89
CNOT4-202ENST00000356162 TBL2Q9Y4P3 447 aaKnown RBP3.24□□□□□ -1.89
CNOT4-202ENST00000356162 NSD1Q96L73 2696 aaPredicted RBP3.24□□□□□ -1.89
CNOT4-202ENST00000356162 MEIKINA0A087WXM9 373 aa3.23□□□□□ -1.89
CNOT4-202ENST00000356162 A0A0A6YYD4 124 aa3.23□□□□□ -1.89
CNOT4-202ENST00000356162 TRBV6-6A0A0A6YYG2 114 aa3.23□□□□□ -1.89
CNOT4-202ENST00000356162 KBTBD11-OT1A0A1B0GTJ5 212 aa3.23□□□□□ -1.89
CNOT4-202ENST00000356162 FOXI3A8MTJ6 420 aaPredicted RBP3.23□□□□□ -1.89
CNOT4-202ENST00000356162 CLDN34H7C241 214 aa3.23□□□□□ -1.89
CNOT4-202ENST00000356162 TRIM77I1YAP6 450 aa3.23□□□□□ -1.89
CNOT4-202ENST00000356162 RGS13O14921 159 aa3.23□□□□□ -1.89
CNOT4-202ENST00000356162 AIREO43918 545 aa3.23□□□□□ -1.89
CNOT4-202ENST00000356162 SCGNO76038 276 aa3.23□□□□□ -1.89
CNOT4-202ENST00000356162 GABARAPO95166 117 aa3.23□□□□□ -1.89
CNOT4-202ENST00000356162 FBP1P09467 338 aa3.23□□□□□ -1.89
CNOT4-202ENST00000356162 CGB3P0DN86 165 aa3.23□□□□□ -1.89
CNOT4-202ENST00000356162 CGB7P0DN87 165 aa3.23□□□□□ -1.89
CNOT4-202ENST00000356162 COX7A1P24310 79 aa3.23□□□□□ -1.89
CNOT4-202ENST00000356162 C17orf58Q2M2W7 97 aa3.23□□□□□ -1.89
CNOT4-202ENST00000356162 Q3ZCU0 254 aa3.23□□□□□ -1.89
CNOT4-202ENST00000356162 MINOS1Q5TGZ0 78 aa3.23□□□□□ -1.89
CNOT4-202ENST00000356162 ZNF626Q68DY1 528 aa3.23□□□□□ -1.89
CNOT4-202ENST00000356162 SIGIRRQ6IA17 410 aa3.23□□□□□ -1.89
CNOT4-202ENST00000356162 OR10K2Q6IF99 312 aa3.23□□□□□ -1.89
CNOT4-202ENST00000356162 SFXN4Q6P4A7 337 aa3.23□□□□□ -1.89
CNOT4-202ENST00000356162 RBMS3Q6XE24 437 aaKnown RBP3.23□□□□□ -1.89
CNOT4-202ENST00000356162 BRD3OSQ6XYD6 125 aa3.23□□□□□ -1.89
CNOT4-202ENST00000356162 SLC16A12Q6ZSM3 486 aa3.23□□□□□ -1.89
CNOT4-202ENST00000356162 ZNF554Q86TJ5 538 aa3.23□□□□□ -1.89
CNOT4-202ENST00000356162 CROCCP3Q8IVE0 287 aa3.23□□□□□ -1.89
CNOT4-202ENST00000356162 BCL6BQ8N143 479 aaPredicted RBP3.23□□□□□ -1.89
CNOT4-202ENST00000356162 PNKDQ8N490 385 aa3.23□□□□□ -1.89
CNOT4-202ENST00000356162 FAM89BQ8N5H3 189 aa3.23□□□□□ -1.89
CNOT4-202ENST00000356162 OR11H6Q8NGC7 330 aa3.23□□□□□ -1.89
CNOT4-202ENST00000356162 OR51D1Q8NGF3 324 aa3.23□□□□□ -1.89
CNOT4-202ENST00000356162 OR56B1Q8NGI3 324 aa3.23□□□□□ -1.89
CNOT4-202ENST00000356162 OR13A1Q8NGR1 328 aa3.23□□□□□ -1.89
CNOT4-202ENST00000356162 ZNF48Q96MX3 618 aaPredicted RBP3.23□□□□□ -1.89
CNOT4-202ENST00000356162 CLEC7AQ9BXN2 247 aa3.23□□□□□ -1.89
CNOT4-202ENST00000356162 TMEM133Q9H2Q1 129 aa3.23□□□□□ -1.89
CNOT4-202ENST00000356162 IDI2-AS1Q9NZ38 188 aa3.23□□□□□ -1.89
CNOT4-202ENST00000356162 HSF4Q9ULV5 492 aa3.23□□□□□ -1.89
CNOT4-202ENST00000356162 PEX16Q9Y5Y5 336 aa3.23□□□□□ -1.89
CNOT4-202ENST00000356162 ETV7Q9Y603 341 aa3.23□□□□□ -1.89
CNOT4-202ENST00000356162 MINOS1-NBL1R4GNA1 71 aa3.23□□□□□ -1.89
CNOT4-202ENST00000356162 WNK2Q9Y3S1 2297 aa3.23□□□□□ -1.89
CNOT4-202ENST00000356162 A0A087X0M5 115 aa3.23□□□□□ -1.89
CNOT4-202ENST00000356162 IGHV2-26A0A0B4J1V2 119 aa3.23□□□□□ -1.89
CNOT4-202ENST00000356162 A0A1B0GX30 115 aa3.23□□□□□ -1.89
CNOT4-202ENST00000356162 DNAJC9-AS1A6NH13 148 aa3.23□□□□□ -1.89
CNOT4-202ENST00000356162 NPIPB11E5RHQ5 1161 aa3.23□□□□□ -1.89
CNOT4-202ENST00000356162 ORC5O43913 435 aa3.23□□□□□ -1.89
CNOT4-202ENST00000356162 VENTXO95231 258 aa3.23□□□□□ -1.89
CNOT4-202ENST00000356162 MT-ND4P03905 459 aa3.23□□□□□ -1.89
CNOT4-202ENST00000356162 CDK2P24941 298 aa3.23□□□□□ -1.89
CNOT4-202ENST00000356162 SDC2P34741 201 aa3.23□□□□□ -1.89
CNOT4-202ENST00000356162 SAA4P35542 130 aa3.23□□□□□ -1.89
CNOT4-202ENST00000356162 CLDN12P56749 244 aa3.23□□□□□ -1.89
CNOT4-202ENST00000356162 UBA52P62987 128 aaKnown RBP3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms