RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 ARRDC3Q96B67 414 aa13.58□□□□□ -0.24
RTN3-205ENST00000356000 ABHD14BQ96IU4 210 aa13.58□□□□□ -0.24
RTN3-205ENST00000356000 PECRQ9BY49 303 aa13.58□□□□□ -0.24
RTN3-205ENST00000356000 CLEC5AQ9NY25 188 aa13.58□□□□□ -0.24
RTN3-205ENST00000356000 CUL9Q8IWT3 2517 aa13.58□□□□□ -0.24
RTN3-205ENST00000356000 ODAMA1E959 279 aa13.57□□□□□ -0.24
RTN3-205ENST00000356000 G3V4G9 280 aa13.57□□□□□ -0.24
RTN3-205ENST00000356000 CSTAP01040 98 aa13.57□□□□□ -0.24
RTN3-205ENST00000356000 ZXDAP98168 799 aa13.57□□□□□ -0.24
RTN3-205ENST00000356000 Q0VG73 95 aa13.57□□□□□ -0.24
RTN3-205ENST00000356000 ERN2Q76MJ5 926 aaKnown RBP13.57□□□□□ -0.24
RTN3-205ENST00000356000 ERASQ7Z444 233 aa13.57□□□□□ -0.24
RTN3-205ENST00000356000 NKX2-6A6NCS4 301 aa13.57□□□□□ -0.24
RTN3-205ENST00000356000 IGLON5A6NGN9 336 aa13.57□□□□□ -0.24
RTN3-205ENST00000356000 SERPINE3A8MV23 424 aa13.57□□□□□ -0.24
RTN3-205ENST00000356000 SLC16A7O60669 478 aa13.57□□□□□ -0.24
RTN3-205ENST00000356000 ZNF253O75346 499 aa13.57□□□□□ -0.24
RTN3-205ENST00000356000 GLI4P10075 376 aa13.57□□□□□ -0.24
RTN3-205ENST00000356000 CTSEP14091 401 aa13.57□□□□□ -0.24
RTN3-205ENST00000356000 MSR1P21757 451 aa13.57□□□□□ -0.24
RTN3-205ENST00000356000 GPR1P46091 355 aa13.57□□□□□ -0.24
RTN3-205ENST00000356000 TLE3Q04726 772 aa13.57□□□□□ -0.24
RTN3-205ENST00000356000 ZNF154Q13106 437 aa13.57□□□□□ -0.24
RTN3-205ENST00000356000 SAMD13Q5VXD3 122 aa13.57□□□□□ -0.24
RTN3-205ENST00000356000 HOXB13Q92826 284 aaPredicted RBP13.57□□□□□ -0.24
RTN3-205ENST00000356000 TMEM186Q96B77 213 aa13.57□□□□□ -0.24
RTN3-205ENST00000356000 OR1A2Q9Y585 309 aa13.57□□□□□ -0.24
RTN3-205ENST00000356000 PRSS37A4D1T9 235 aa13.56□□□□□ -0.24
RTN3-205ENST00000356000 TMEM50AO95807 157 aa13.56□□□□□ -0.24
RTN3-205ENST00000356000 EOMESO95936 686 aa13.56□□□□□ -0.24
RTN3-205ENST00000356000 EGR4Q05215 589 aa13.56□□□□□ -0.24
RTN3-205ENST00000356000 ATG4DQ86TL0 474 aaPredicted RBP13.56□□□□□ -0.24
RTN3-205ENST00000356000 B3GALT1Q9Y5Z6 326 aa13.56□□□□□ -0.24
RTN3-205ENST00000356000 TRPM6Q9BX84 2022 aa13.56□□□□□ -0.24
RTN3-205ENST00000356000 TTRP02766 147 aa13.56□□□□□ -0.24
RTN3-205ENST00000356000 PNMTP11086 282 aa13.56□□□□□ -0.24
RTN3-205ENST00000356000 MGAT2Q10469 447 aa13.56□□□□□ -0.24
RTN3-205ENST00000356000 PRICKLE4Q2TBC4 344 aa13.56□□□□□ -0.24
RTN3-205ENST00000356000 AMMECR1LQ6DCA0 310 aa13.56□□□□□ -0.24
RTN3-205ENST00000356000 CBLN3Q6UW01 205 aa13.56□□□□□ -0.24
RTN3-205ENST00000356000 ZNF440Q8IYI8 595 aa13.56□□□□□ -0.24
RTN3-205ENST00000356000 OR5AS1Q8N127 324 aa13.56□□□□□ -0.24
RTN3-205ENST00000356000 RAB42Q8N4Z0 105 aa13.56□□□□□ -0.24
RTN3-205ENST00000356000 SUMF1Q8NBK3 374 aa13.56□□□□□ -0.24
RTN3-205ENST00000356000 OR51T1Q8NGJ9 327 aa13.56□□□□□ -0.24
RTN3-205ENST00000356000 MRPL30Q8TCC3 161 aaKnown RBP13.56□□□□□ -0.24
RTN3-205ENST00000356000 SHISA7A6NL88 538 aa13.55□□□□□ -0.24
RTN3-205ENST00000356000 M0R296 226 aa13.55□□□□□ -0.24
RTN3-205ENST00000356000 IFNA5P01569 189 aa13.55□□□□□ -0.24
RTN3-205ENST00000356000 CT62P0C5K7 136 aa13.55□□□□□ -0.24
RTN3-205ENST00000356000 DUSP3P51452 185 aaPredicted RBP13.55□□□□□ -0.24
RTN3-205ENST00000356000 CLDN15P56746 228 aa13.55□□□□□ -0.24
RTN3-205ENST00000356000 SCGB2A2Q13296 93 aa13.55□□□□□ -0.24
RTN3-205ENST00000356000 CDCP2Q5VXM1 449 aa13.55□□□□□ -0.24
RTN3-205ENST00000356000 BAGE3Q86Y29 109 aa13.55□□□□□ -0.24
RTN3-205ENST00000356000 BAGE2Q86Y30 109 aa13.55□□□□□ -0.24
RTN3-205ENST00000356000 RSG1Q9BU20 258 aa13.55□□□□□ -0.24
RTN3-205ENST00000356000 FOXQ1Q9C009 403 aa13.55□□□□□ -0.24
RTN3-205ENST00000356000 S1PR5Q9H228 398 aa13.55□□□□□ -0.24
RTN3-205ENST00000356000 NRN1Q9NPD7 142 aa13.55□□□□□ -0.24
RTN3-205ENST00000356000 RANBP2P49792 3224 aaKnown RBP13.55□□□□□ -0.24
RTN3-205ENST00000356000 MLNRO43193 412 aa13.55□□□□□ -0.24
RTN3-205ENST00000356000 RBFOX2O43251 390 aaKnown RBP eCLIP13.55□□□□□ -0.24
RTN3-205ENST00000356000 OR7C2O60412 319 aa13.55□□□□□ -0.24
RTN3-205ENST00000356000 SCGB1A1P11684 91 aa13.55□□□□□ -0.24
RTN3-205ENST00000356000 BLVRBP30043 206 aaPredicted RBP13.55□□□□□ -0.24
RTN3-205ENST00000356000 OR1D2P34982 312 aa13.55□□□□□ -0.24
RTN3-205ENST00000356000 MDH2P40926 338 aaKnown RBP13.55□□□□□ -0.24
RTN3-205ENST00000356000 ZP4Q12836 540 aa13.55□□□□□ -0.24
RTN3-205ENST00000356000 POM121L1PQ3SYA9 428 aa13.55□□□□□ -0.24
RTN3-205ENST00000356000 PHLDA2Q53GA4 152 aa13.55□□□□□ -0.24
RTN3-205ENST00000356000 OR4N2Q8NGD1 307 aa13.55□□□□□ -0.24
RTN3-205ENST00000356000 ASB10Q8WXI3 467 aa13.55□□□□□ -0.24
RTN3-205ENST00000356000 FAM103A1Q9BTL3 118 aaKnown RBP13.55□□□□□ -0.24
RTN3-205ENST00000356000 ZNF286AQ9HBT8 521 aa13.55□□□□□ -0.24
RTN3-205ENST00000356000 OR2T8A6NH00 312 aa13.54□□□□□ -0.24
RTN3-205ENST00000356000 TRAF3IP2O43734 574 aaPredicted RBP13.54□□□□□ -0.24
RTN3-205ENST00000356000 CTLA4P16410 223 aa13.54□□□□□ -0.24
RTN3-205ENST00000356000 NPBWR2P48146 333 aa13.54□□□□□ -0.24
RTN3-205ENST00000356000 SARAFQ96BY9 339 aa13.54□□□□□ -0.24
RTN3-205ENST00000356000 FAM60AQ9NP50 221 aa13.54□□□□□ -0.24
RTN3-205ENST00000356000 ANXA10Q9UJ72 324 aa13.54□□□□□ -0.24
RTN3-205ENST00000356000 TBL2Q9Y4P3 447 aaKnown RBP13.54□□□□□ -0.24
RTN3-205ENST00000356000 HCFC2Q9Y5Z7 792 aa13.54□□□□□ -0.24
RTN3-205ENST00000356000 A0A1B0GV72 72 aa13.54□□□□□ -0.24
RTN3-205ENST00000356000 F2Z2F3 143 aa13.54□□□□□ -0.24
RTN3-205ENST00000356000 PHF1O43189 567 aaPredicted RBP13.54□□□□□ -0.24
RTN3-205ENST00000356000 GOSR1O95249 250 aa13.54□□□□□ -0.24
RTN3-205ENST00000356000 POU3F1Q03052 451 aaPredicted RBP13.54□□□□□ -0.24
RTN3-205ENST00000356000 SPIN3Q5JUX0 258 aa13.54□□□□□ -0.24
RTN3-205ENST00000356000 CMTM8Q8IZV2 173 aa13.54□□□□□ -0.24
RTN3-205ENST00000356000 BATF2Q8N1L9 274 aa13.54□□□□□ -0.24
RTN3-205ENST00000356000 SIGLEC12Q96PQ1 595 aa13.54□□□□□ -0.24
RTN3-205ENST00000356000 PSMG3Q9BT73 122 aaPredicted RBP13.54□□□□□ -0.24
RTN3-205ENST00000356000 PLSCR4Q9NRQ2 329 aa13.54□□□□□ -0.24
RTN3-205ENST00000356000 MCTS1Q9ULC4 181 aaKnown RBP13.54□□□□□ -0.24
RTN3-205ENST00000356000 DPRXA6NFQ7 191 aa13.53□□□□□ -0.24
RTN3-205ENST00000356000 SLC33A1O00400 549 aaPredicted RBP13.53□□□□□ -0.24
RTN3-205ENST00000356000 FOXS1O43638 330 aa13.53□□□□□ -0.24
RTN3-205ENST00000356000 NRASP01111 189 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms