RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 DEFB134Q4QY38 66 aa6.24□□□□□ -1.41
ZNF540-202ENST00000343599 TMEM155Q4W5P6 130 aa6.24□□□□□ -1.41
ZNF540-202ENST00000343599 SYT9Q86SS6 491 aa6.24□□□□□ -1.41
ZNF540-202ENST00000343599 FBXL14Q8N1E6 418 aa6.24□□□□□ -1.41
ZNF540-202ENST00000343599 OR56A1Q8NGH5 318 aa6.24□□□□□ -1.41
ZNF540-202ENST00000343599 TXN2Q99757 166 aa6.24□□□□□ -1.41
ZNF540-202ENST00000343599 ZFAND3Q9H8U3 227 aa6.24□□□□□ -1.41
ZNF540-202ENST00000343599 OR5V1Q9UGF6 321 aa6.24□□□□□ -1.41
ZNF540-202ENST00000343599 AK6Q9Y3D8 172 aaKnown RBP6.24□□□□□ -1.41
ZNF540-202ENST00000343599 K7EPK0 472 aa6.24□□□□□ -1.41
ZNF540-202ENST00000343599 RAB27BO00194 218 aa6.24□□□□□ -1.41
ZNF540-202ENST00000343599 GEMIN2O14893 280 aaKnown RBP6.24□□□□□ -1.41
ZNF540-202ENST00000343599 OR2T7P0C7T2 308 aa6.24□□□□□ -1.41
ZNF540-202ENST00000343599 CT45A8P0DMV1 189 aa6.24□□□□□ -1.41
ZNF540-202ENST00000343599 CT45A9P0DMV2 189 aa6.24□□□□□ -1.41
ZNF540-202ENST00000343599 TMEM225BP0DP42 221 aa6.24□□□□□ -1.41
ZNF540-202ENST00000343599 ALDH3B1P43353 468 aa6.24□□□□□ -1.41
ZNF540-202ENST00000343599 RND2P52198 227 aa6.24□□□□□ -1.41
ZNF540-202ENST00000343599 UBE2KP61086 200 aa6.24□□□□□ -1.41
ZNF540-202ENST00000343599 SLC9A3R2Q15599 337 aa6.24□□□□□ -1.41
ZNF540-202ENST00000343599 CT45A2Q5DJT8 189 aa6.24□□□□□ -1.41
ZNF540-202ENST00000343599 HIST2H2BCQ6DN03 193 aa6.24□□□□□ -1.41
ZNF540-202ENST00000343599 FAM71E1Q6IPT2 247 aa6.24□□□□□ -1.41
ZNF540-202ENST00000343599 LYG2Q86SG7 212 aa6.24□□□□□ -1.41
ZNF540-202ENST00000343599 ZNF101Q8IZC7 436 aa6.24□□□□□ -1.41
ZNF540-202ENST00000343599 FAM71E2Q8N5Q1 922 aa6.24□□□□□ -1.41
ZNF540-202ENST00000343599 BBS1Q8NFJ9 593 aa6.24□□□□□ -1.41
ZNF540-202ENST00000343599 TMEM106AQ96A25 262 aa6.24□□□□□ -1.41
ZNF540-202ENST00000343599 TMEM18Q96B42 140 aa6.24□□□□□ -1.41
ZNF540-202ENST00000343599 ACY3Q96HD9 319 aa6.24□□□□□ -1.41
ZNF540-202ENST00000343599 PBDC1Q9BVG4 233 aa6.24□□□□□ -1.41
ZNF540-202ENST00000343599 TMEM242Q9NWH2 141 aa6.24□□□□□ -1.41
ZNF540-202ENST00000343599 NAGKQ9UJ70 344 aa6.24□□□□□ -1.41
ZNF540-202ENST00000343599 NOP16Q9Y3C1 178 aaKnown RBP6.24□□□□□ -1.41
ZNF540-202ENST00000343599 ZNF780BQ9Y6R6 833 aa6.24□□□□□ -1.41
ZNF540-202ENST00000343599 MYO15AQ9UKN7 3530 aa6.24□□□□□ -1.41
ZNF540-202ENST00000343599 TRBV24-1A0A075B6N3 115 aa6.23□□□□□ -1.41
ZNF540-202ENST00000343599 F6UZH7 168 aa6.23□□□□□ -1.41
ZNF540-202ENST00000343599 STAG3L3P0CL85 134 aa6.23□□□□□ -1.41
ZNF540-202ENST00000343599 ARL3P36405 182 aa6.23□□□□□ -1.41
ZNF540-202ENST00000343599 RPS11P62280 158 aaKnown RBP eCLIP6.23□□□□□ -1.41
ZNF540-202ENST00000343599 PRSS8Q16651 343 aa6.23□□□□□ -1.41
ZNF540-202ENST00000343599 SOHLH1Q5JUK2 328 aa6.23□□□□□ -1.41
ZNF540-202ENST00000343599 TCF24Q7RTU0 167 aa6.23□□□□□ -1.41
ZNF540-202ENST00000343599 ZNF433Q8N7K0 673 aaPredicted RBP6.23□□□□□ -1.41
ZNF540-202ENST00000343599 TMEM99Q8N816 258 aa6.23□□□□□ -1.41
ZNF540-202ENST00000343599 TOMM40LQ969M1 308 aa6.23□□□□□ -1.41
ZNF540-202ENST00000343599 RPUSD4Q96CM3 377 aaKnown RBP6.23□□□□□ -1.41
ZNF540-202ENST00000343599 JSRP1Q96MG2 331 aaPredicted RBP6.23□□□□□ -1.41
ZNF540-202ENST00000343599 EBPLQ9BY08 206 aa6.23□□□□□ -1.41
ZNF540-202ENST00000343599 HES7Q9BYE0 225 aa6.23□□□□□ -1.41
ZNF540-202ENST00000343599 EIF5A2Q9GZV4 153 aaKnown RBP6.23□□□□□ -1.41
ZNF540-202ENST00000343599 OR51I1Q9H343 314 aa6.23□□□□□ -1.41
ZNF540-202ENST00000343599 FKBP11Q9NYL4 201 aa6.23□□□□□ -1.41
ZNF540-202ENST00000343599 STEAP1Q9UHE8 339 aa6.23□□□□□ -1.41
ZNF540-202ENST00000343599 ST3GAL6Q9Y274 331 aa6.23□□□□□ -1.41
ZNF540-202ENST00000343599 FBN2P35556 2912 aa6.23□□□□□ -1.41
ZNF540-202ENST00000343599 DAPL1A0PJW8 107 aa6.23□□□□□ -1.41
ZNF540-202ENST00000343599 H3BQ15 152 aa6.23□□□□□ -1.41
ZNF540-202ENST00000343599 DUS4LO95620 317 aaKnown RBP6.23□□□□□ -1.41
ZNF540-202ENST00000343599 CST4P01036 141 aa6.23□□□□□ -1.41
ZNF540-202ENST00000343599 HLA-AP01891 365 aaKnown RBP6.23□□□□□ -1.41
ZNF540-202ENST00000343599 RNASE1P07998 156 aaKnown RBP6.23□□□□□ -1.41
ZNF540-202ENST00000343599 GTF2F2P13984 249 aa6.23□□□□□ -1.41
ZNF540-202ENST00000343599 RPL4P36578 427 aaKnown RBP6.23□□□□□ -1.41
ZNF540-202ENST00000343599 GDF5P43026 501 aa6.23□□□□□ -1.41
ZNF540-202ENST00000343599 CX3CR1P49238 355 aa6.23□□□□□ -1.41
ZNF540-202ENST00000343599 FAM3AP98173 230 aa6.23□□□□□ -1.41
ZNF540-202ENST00000343599 CYCSP99999 105 aaKnown RBP6.23□□□□□ -1.41
ZNF540-202ENST00000343599 PLAURQ03405 335 aa6.23□□□□□ -1.41
ZNF540-202ENST00000343599 PRDX4Q13162 271 aa6.23□□□□□ -1.41
ZNF540-202ENST00000343599 MIDNQ504T8 468 aa6.23□□□□□ -1.41
ZNF540-202ENST00000343599 REEP3Q6NUK4 255 aa6.23□□□□□ -1.41
ZNF540-202ENST00000343599 STEAP1BQ6NZ63 245 aa6.23□□□□□ -1.41
ZNF540-202ENST00000343599 SLC25A42Q86VD7 318 aa6.23□□□□□ -1.41
ZNF540-202ENST00000343599 OR4X1Q8NH49 305 aa6.23□□□□□ -1.41
ZNF540-202ENST00000343599 SEH1LQ96EE3 360 aa6.23□□□□□ -1.41
ZNF540-202ENST00000343599 GINS3Q9BRX5 216 aa6.23□□□□□ -1.41
ZNF540-202ENST00000343599 SLC35A5Q9BS91 424 aa6.23□□□□□ -1.41
ZNF540-202ENST00000343599 CLEC5AQ9NY25 188 aa6.23□□□□□ -1.41
ZNF540-202ENST00000343599 SH2B3Q9UQQ2 575 aa6.23□□□□□ -1.41
ZNF540-202ENST00000343599 HIF3AQ9Y2N7 669 aa6.23□□□□□ -1.41
ZNF540-202ENST00000343599 MSGN1A6NI15 193 aa6.22□□□□□ -1.41
ZNF540-202ENST00000343599 RNF212BA8MTL3 300 aa6.22□□□□□ -1.41
ZNF540-202ENST00000343599 B4DEV8 164 aa6.22□□□□□ -1.41
ZNF540-202ENST00000343599 H0YIZ8 118 aa6.22□□□□□ -1.41
ZNF540-202ENST00000343599 HSD17B6O14756 317 aa6.22□□□□□ -1.41
ZNF540-202ENST00000343599 GAPDHP04406 335 aaKnown RBP6.22□□□□□ -1.41
ZNF540-202ENST00000343599 ACAA2P42765 397 aaKnown RBP6.22□□□□□ -1.41
ZNF540-202ENST00000343599 ELLP55199 621 aaPredicted RBP6.22□□□□□ -1.41
ZNF540-202ENST00000343599 CPSF6Q16630 551 aaKnown RBP eCLIP6.22□□□□□ -1.41
ZNF540-202ENST00000343599 FRG2Q64ET8 278 aa6.22□□□□□ -1.41
ZNF540-202ENST00000343599 NIPAL3Q6P499 406 aa6.22□□□□□ -1.41
ZNF540-202ENST00000343599 PRSS54Q6PEW0 395 aa6.22□□□□□ -1.41
ZNF540-202ENST00000343599 CMTM1Q8IZ96 169 aa6.22□□□□□ -1.41
ZNF540-202ENST00000343599 FAM89BQ8N5H3 189 aa6.22□□□□□ -1.41
ZNF540-202ENST00000343599 OR4D11Q8NGI4 311 aa6.22□□□□□ -1.41
ZNF540-202ENST00000343599 BPIFA2Q96DR5 249 aa6.22□□□□□ -1.41
ZNF540-202ENST00000343599 FRG2BQ96QU4 278 aa6.22□□□□□ -1.41
ZNF540-202ENST00000343599 RBKSQ9H477 322 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms