RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 REG4Q9BYZ8 158 aa12.92□□□□□ -0.34
RRP1B-201ENST00000340648 GSN-AS1Q9NRJ2 163 aa12.92□□□□□ -0.34
RRP1B-201ENST00000340648 TMEM38BQ9NVV0 291 aa12.92□□□□□ -0.34
RRP1B-201ENST00000340648 OR2W1Q9Y3N9 320 aa12.92□□□□□ -0.34
RRP1B-201ENST00000340648 DOCK4Q8N1I0 1966 aa12.92□□□□□ -0.34
RRP1B-201ENST00000340648 LINC00587B1AMM8 73 aa12.91□□□□□ -0.34
RRP1B-201ENST00000340648 IGHV3-13P01766 116 aa12.91□□□□□ -0.34
RRP1B-201ENST00000340648 IGHV3-7P01780 117 aa12.91□□□□□ -0.34
RRP1B-201ENST00000340648 ATP6V1FQ16864 119 aa12.91□□□□□ -0.34
RRP1B-201ENST00000340648 ZNF385CQ66K41 422 aaPredicted RBP12.91□□□□□ -0.34
RRP1B-201ENST00000340648 LRRC75AQ8NAA5 344 aa12.91□□□□□ -0.34
RRP1B-201ENST00000340648 GGACTQ9BVM4 153 aa12.91□□□□□ -0.34
RRP1B-201ENST00000340648 METTL1Q9UBP6 276 aaKnown RBP12.91□□□□□ -0.34
RRP1B-201ENST00000340648 ACER2Q5QJU3 275 aa12.91□□□□□ -0.34
RRP1B-201ENST00000340648 A0A1B0GU03 582 aa12.91□□□□□ -0.34
RRP1B-201ENST00000340648 ZNHIT1O43257 154 aa12.91□□□□□ -0.34
RRP1B-201ENST00000340648 GALR2O43603 387 aaPredicted RBP12.91□□□□□ -0.34
RRP1B-201ENST00000340648 CLN5O75503 358 aa12.91□□□□□ -0.34
RRP1B-201ENST00000340648 CRISP2P16562 243 aa12.91□□□□□ -0.34
RRP1B-201ENST00000340648 ZNF25P17030 456 aaPredicted RBP12.91□□□□□ -0.34
RRP1B-201ENST00000340648 ZNF343Q6P1L6 599 aa12.91□□□□□ -0.34
RRP1B-201ENST00000340648 SP7Q8TDD2 431 aaPredicted RBP12.91□□□□□ -0.34
RRP1B-201ENST00000340648 ACY3Q96HD9 319 aa12.91□□□□□ -0.34
RRP1B-201ENST00000340648 LRFN3Q9BTN0 628 aa12.91□□□□□ -0.34
RRP1B-201ENST00000340648 COMMD5Q9GZQ3 224 aa12.91□□□□□ -0.34
RRP1B-201ENST00000340648 TMEM222Q9H0R3 208 aa12.91□□□□□ -0.34
RRP1B-201ENST00000340648 CYB5R3P00387 301 aaPredicted RBP12.91□□□□□ -0.34
RRP1B-201ENST00000340648 HSPB1P04792 205 aaKnown RBP12.91□□□□□ -0.34
RRP1B-201ENST00000340648 PGA5P0DJD9 388 aa12.91□□□□□ -0.34
RRP1B-201ENST00000340648 CDX1P47902 265 aaPredicted RBP12.91□□□□□ -0.34
RRP1B-201ENST00000340648 SLC25A47Q6Q0C1 308 aa12.91□□□□□ -0.34
RRP1B-201ENST00000340648 SCARF2Q96GP6 870 aaPredicted RBP12.91□□□□□ -0.34
RRP1B-201ENST00000340648 IGLV3-21P80748 117 aaPredicted RBP12.9□□□□□ -0.34
RRP1B-201ENST00000340648 RTL8BQ17RB0 113 aa12.9□□□□□ -0.34
RRP1B-201ENST00000340648 GAB4Q2WGN9 574 aa12.9□□□□□ -0.34
RRP1B-201ENST00000340648 DTD1Q8TEA8 209 aa12.9□□□□□ -0.34
RRP1B-201ENST00000340648 ABHD3Q8WU67 409 aa12.9□□□□□ -0.34
RRP1B-201ENST00000340648 SF3B5Q9BWJ5 86 aaKnown RBP12.9□□□□□ -0.34
RRP1B-201ENST00000340648 RP1L1Q8IWN7 2480 aaPredicted RBP12.9□□□□□ -0.34
RRP1B-201ENST00000340648 OR5B21A6NL26 309 aa12.9□□□□□ -0.34
RRP1B-201ENST00000340648 ZNF488Q96MN9 340 aa12.9□□□□□ -0.34
RRP1B-201ENST00000340648 WDR81Q562E7 1941 aa12.9□□□□□ -0.34
RRP1B-201ENST00000340648 IGKV1D-43A0A0B4J1Z2 117 aa12.9□□□□□ -0.34
RRP1B-201ENST00000340648 A0A1B0GTQ1 180 aa12.9□□□□□ -0.34
RRP1B-201ENST00000340648 NKX6-3A6NJ46 265 aa12.9□□□□□ -0.34
RRP1B-201ENST00000340648 GYPAP02724 150 aa12.9□□□□□ -0.34
RRP1B-201ENST00000340648 GNG4P50150 75 aa12.9□□□□□ -0.34
RRP1B-201ENST00000340648 ZNF718Q3SXZ3 478 aa12.9□□□□□ -0.34
RRP1B-201ENST00000340648 ZNF658BQ4V348 819 aaPredicted RBP12.9□□□□□ -0.34
RRP1B-201ENST00000340648 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.9□□□□□ -0.34
RRP1B-201ENST00000340648 UBE2ZQ9H832 354 aaPredicted RBP12.9□□□□□ -0.34
RRP1B-201ENST00000340648 OCIAD1Q9NX40 245 aa12.9□□□□□ -0.34
RRP1B-201ENST00000340648 CXorf65A6NEN9 183 aa12.9□□□□□ -0.35
RRP1B-201ENST00000340648 PMELP40967 661 aa12.9□□□□□ -0.35
RRP1B-201ENST00000340648 AMTP48728 403 aa12.9□□□□□ -0.35
RRP1B-201ENST00000340648 SUB1P53999 127 aaKnown RBP eCLIP12.9□□□□□ -0.35
RRP1B-201ENST00000340648 EIF3IQ13347 325 aaKnown RBP12.9□□□□□ -0.35
RRP1B-201ENST00000340648 FZR1Q9UM11 496 aa12.9□□□□□ -0.35
RRP1B-201ENST00000340648 UNC13CQ8NB66 2214 aa12.89□□□□□ -0.35
RRP1B-201ENST00000340648 SCTP09683 121 aa12.89□□□□□ -0.35
RRP1B-201ENST00000340648 ACSM6Q6P461 480 aa12.89□□□□□ -0.35
RRP1B-201ENST00000340648 DPPA3Q6W0C5 159 aa12.89□□□□□ -0.35
RRP1B-201ENST00000340648 SLC35E3Q7Z769 313 aa12.89□□□□□ -0.35
RRP1B-201ENST00000340648 FAM173AQ9BQD7 235 aa12.89□□□□□ -0.35
RRP1B-201ENST00000340648 DMRT1Q9Y5R6 373 aa12.89□□□□□ -0.35
RRP1B-201ENST00000340648 FAM186AA6NE01 2351 aa12.89□□□□□ -0.35
RRP1B-201ENST00000340648 PRF1P14222 555 aa12.89□□□□□ -0.35
RRP1B-201ENST00000340648 CNN1P51911 297 aaKnown RBP12.89□□□□□ -0.35
RRP1B-201ENST00000340648 CD81P60033 236 aa12.89□□□□□ -0.35
RRP1B-201ENST00000340648 OR1C1Q15619 314 aa12.89□□□□□ -0.35
RRP1B-201ENST00000340648 WDR25Q64LD2 544 aaPredicted RBP12.89□□□□□ -0.35
RRP1B-201ENST00000340648 OR10G8Q8NGN5 311 aa12.89□□□□□ -0.35
RRP1B-201ENST00000340648 NUDT16L1Q9BRJ7 211 aaKnown RBP12.89□□□□□ -0.35
RRP1B-201ENST00000340648 R4GN57 208 aa12.89□□□□□ -0.35
RRP1B-201ENST00000340648 MYLKQ15746 1914 aa12.89□□□□□ -0.35
RRP1B-201ENST00000340648 DDTP30046 118 aa12.89□□□□□ -0.35
RRP1B-201ENST00000340648 G6PCP35575 357 aa12.89□□□□□ -0.35
RRP1B-201ENST00000340648 IL11RAQ14626 422 aa12.89□□□□□ -0.35
RRP1B-201ENST00000340648 SNAI3Q3KNW1 292 aa12.89□□□□□ -0.35
RRP1B-201ENST00000340648 C1QL2Q7Z5L3 287 aa12.89□□□□□ -0.35
RRP1B-201ENST00000340648 MOB3AQ96BX8 217 aa12.89□□□□□ -0.35
RRP1B-201ENST00000340648 PCED1AQ9H1Q7 454 aa12.89□□□□□ -0.35
RRP1B-201ENST00000340648 GPR35Q9HC97 309 aa12.89□□□□□ -0.35
RRP1B-201ENST00000340648 FSCN3Q9NQT6 498 aa12.89□□□□□ -0.35
RRP1B-201ENST00000340648 RPEL1Q2QD12 228 aa12.89□□□□□ -0.35
RRP1B-201ENST00000340648 IL17BQ9UHF5 180 aa12.89□□□□□ -0.35
RRP1B-201ENST00000340648 CBY3A6NI87 242 aa12.88□□□□□ -0.35
RRP1B-201ENST00000340648 COX7A2P2O60397 106 aa12.88□□□□□ -0.35
RRP1B-201ENST00000340648 TCL1AP56279 114 aa12.88□□□□□ -0.35
RRP1B-201ENST00000340648 RSPO4Q2I0M5 234 aaPredicted RBP12.88□□□□□ -0.35
RRP1B-201ENST00000340648 RNF126Q9BV68 326 aa12.88□□□□□ -0.35
RRP1B-201ENST00000340648 MPC1Q9Y5U8 109 aa12.88□□□□□ -0.35
RRP1B-201ENST00000340648 ERHP84090 104 aaKnown RBP12.88□□□□□ -0.35
RRP1B-201ENST00000340648 TMEM187Q14656 261 aa12.88□□□□□ -0.35
RRP1B-201ENST00000340648 RNASEKQ6P5S7 137 aaKnown RBP12.88□□□□□ -0.35
RRP1B-201ENST00000340648 RRP8O43159 456 aaKnown RBP12.88□□□□□ -0.35
RRP1B-201ENST00000340648 MELTFP08582 738 aa12.88□□□□□ -0.35
RRP1B-201ENST00000340648 LIFP15018 202 aa12.88□□□□□ -0.35
RRP1B-201ENST00000340648 FAM27BQ5VT28 67 aa12.88□□□□□ -0.35
RRP1B-201ENST00000340648 WDR74Q6RFH5 385 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms