RNA–Protein interactions for RNA: ENST00000339717.11

BRPF3-201, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5 BASIC

Gene BRPF3, Length 4,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-201ENST00000339717 ALKBH3Q96Q83 286 aaPredicted RBP11.11□□□□□ -0.63
BRPF3-201ENST00000339717 SERINC4A6NH21 518 aa11.11□□□□□ -0.63
BRPF3-201ENST00000339717 C1QTNF9BB2RNN3 333 aa11.11□□□□□ -0.63
BRPF3-201ENST00000339717 SYNGR2O43760 224 aa11.11□□□□□ -0.63
BRPF3-201ENST00000339717 RPS11P62280 158 aaKnown RBP eCLIP11.11□□□□□ -0.63
BRPF3-201ENST00000339717 OR10J3Q5JRS4 329 aa11.11□□□□□ -0.63
BRPF3-201ENST00000339717 SLC48A1Q6P1K1 146 aa11.11□□□□□ -0.63
BRPF3-201ENST00000339717 C12orf76Q8N812 135 aaPredicted RBP11.11□□□□□ -0.63
BRPF3-201ENST00000339717 DOK4Q8TEW6 326 aa11.11□□□□□ -0.63
BRPF3-201ENST00000339717 WDR54Q9H977 334 aa11.11□□□□□ -0.63
BRPF3-201ENST00000339717 NCBP2LA6PVI3 153 aaKnown RBP11.11□□□□□ -0.63
BRPF3-201ENST00000339717 ZNF324O75467 553 aaPredicted RBP11.11□□□□□ -0.63
BRPF3-201ENST00000339717 C1QCP02747 245 aa11.11□□□□□ -0.63
BRPF3-201ENST00000339717 PLP2Q04941 152 aa11.11□□□□□ -0.63
BRPF3-201ENST00000339717 NNATQ16517 81 aa11.11□□□□□ -0.63
BRPF3-201ENST00000339717 C10orf111Q8N326 155 aa11.11□□□□□ -0.63
BRPF3-201ENST00000339717 OR10G3Q8NGC4 313 aa11.11□□□□□ -0.63
BRPF3-201ENST00000339717 MAP1LC3AQ9H492 121 aa11.11□□□□□ -0.63
BRPF3-201ENST00000339717 SLC7A10Q9NS82 523 aa11.11□□□□□ -0.63
BRPF3-201ENST00000339717 MYADML2A6NDP7 307 aa11.1□□□□□ -0.63
BRPF3-201ENST00000339717 PTGER1P34995 402 aa11.1□□□□□ -0.63
BRPF3-201ENST00000339717 EFNB2P52799 333 aa11.1□□□□□ -0.63
BRPF3-201ENST00000339717 MFAP2P55001 183 aa11.1□□□□□ -0.63
BRPF3-201ENST00000339717 ICAM4Q14773 271 aa11.1□□□□□ -0.63
BRPF3-201ENST00000339717 GAB4Q2WGN9 574 aa11.1□□□□□ -0.63
BRPF3-201ENST00000339717 ACTL10Q5JWF8 245 aa11.1□□□□□ -0.63
BRPF3-201ENST00000339717 MARCH3Q86UD3 253 aa11.1□□□□□ -0.63
BRPF3-201ENST00000339717 C5orf17Q8NAS9 161 aa11.1□□□□□ -0.63
BRPF3-201ENST00000339717 ASB10Q8WXI3 467 aa11.1□□□□□ -0.63
BRPF3-201ENST00000339717 TSSC4Q9Y5U2 329 aaPredicted RBP11.1□□□□□ -0.63
BRPF3-201ENST00000339717 SHISA3A0PJX4 238 aa11.1□□□□□ -0.63
BRPF3-201ENST00000339717 TMEM189A5PLL7 270 aa11.1□□□□□ -0.63
BRPF3-201ENST00000339717 RUNX1Q01196 453 aa11.1□□□□□ -0.63
BRPF3-201ENST00000339717 LINC00346Q8IVM7 164 aa11.1□□□□□ -0.63
BRPF3-201ENST00000339717 ST6GALNAC6Q969X2 333 aa11.1□□□□□ -0.63
BRPF3-201ENST00000339717 KLRF1Q9NZS2 232 aa11.1□□□□□ -0.63
BRPF3-201ENST00000339717 B4DGG1 531 aa11.1□□□□□ -0.63
BRPF3-201ENST00000339717 CXorf1O96002 111 aa11.1□□□□□ -0.63
BRPF3-201ENST00000339717 CSN3P07498 182 aa11.1□□□□□ -0.63
BRPF3-201ENST00000339717 SOX8P57073 446 aa11.1□□□□□ -0.63
BRPF3-201ENST00000339717 RBX1P62877 108 aa11.1□□□□□ -0.63
BRPF3-201ENST00000339717 OTPQ5XKR4 325 aa11.1□□□□□ -0.63
BRPF3-201ENST00000339717 LYZL2Q7Z4W2 148 aa11.1□□□□□ -0.63
BRPF3-201ENST00000339717 SLC16A11Q8NCK7 471 aa11.1□□□□□ -0.63
BRPF3-201ENST00000339717 TMEM40Q8WWA1 233 aa11.1□□□□□ -0.63
BRPF3-201ENST00000339717 HIST1H4GQ99525 98 aa11.1□□□□□ -0.63
BRPF3-201ENST00000339717 ANKRD10Q9NXR5 420 aa11.1□□□□□ -0.63
BRPF3-201ENST00000339717 PDE4DIPQ5VU43 2346 aa11.1□□□□□ -0.63
BRPF3-201ENST00000339717 CCL16O15467 120 aa11.1□□□□□ -0.63
BRPF3-201ENST00000339717 AGERQ15109 404 aa11.1□□□□□ -0.63
BRPF3-201ENST00000339717 MPV17L2Q567V2 206 aa11.1□□□□□ -0.63
BRPF3-201ENST00000339717 UNQ9370/PRO34162Q6UXP9 181 aa11.1□□□□□ -0.63
BRPF3-201ENST00000339717 PIGTQ969N2 578 aa11.1□□□□□ -0.63
BRPF3-201ENST00000339717 SDF2Q99470 211 aa11.1□□□□□ -0.63
BRPF3-201ENST00000339717 HS3ST3B1Q9Y662 390 aa11.1□□□□□ -0.63
BRPF3-201ENST00000339717 A0A1W2PP11 408 aa11.09□□□□□ -0.63
BRPF3-201ENST00000339717 BLACEA4D250 179 aa11.09□□□□□ -0.63
BRPF3-201ENST00000339717 NDUFB4O95168 129 aa11.09□□□□□ -0.63
BRPF3-201ENST00000339717 FAM157CP0CG43 387 aa11.09□□□□□ -0.63
BRPF3-201ENST00000339717 RND2P52198 227 aa11.09□□□□□ -0.63
BRPF3-201ENST00000339717 MMD2Q8IY49 270 aa11.09□□□□□ -0.63
BRPF3-201ENST00000339717 OR51E1Q8TCB6 317 aa11.09□□□□□ -0.63
BRPF3-201ENST00000339717 CTHRC1Q96CG8 243 aa11.09□□□□□ -0.63
BRPF3-201ENST00000339717 LRRC61Q9BV99 259 aa11.09□□□□□ -0.63
BRPF3-201ENST00000339717 TECRQ9NZ01 308 aaKnown RBP11.09□□□□□ -0.63
BRPF3-201ENST00000339717 TAAR3PQ9P1P4 343 aa11.09□□□□□ -0.63
BRPF3-201ENST00000339717 TRAV26-1A0A087WT03 109 aa11.09□□□□□ -0.63
BRPF3-201ENST00000339717 GAGE12JA6NER3 117 aa11.09□□□□□ -0.63
BRPF3-201ENST00000339717 GAGE7O76087 117 aa11.09□□□□□ -0.63
BRPF3-201ENST00000339717 GAGE12FP0CL80 117 aa11.09□□□□□ -0.63
BRPF3-201ENST00000339717 GAGE12GP0CL81 117 aa11.09□□□□□ -0.63
BRPF3-201ENST00000339717 GAGE12IP0CL82 117 aa11.09□□□□□ -0.63
BRPF3-201ENST00000339717 GAGE4Q13068 117 aa11.09□□□□□ -0.63
BRPF3-201ENST00000339717 MFAP5Q13361 173 aa11.09□□□□□ -0.63
BRPF3-201ENST00000339717 MRPL58Q14197 206 aaKnown RBP11.09□□□□□ -0.63
BRPF3-201ENST00000339717 FAM219BQ5XKK7 198 aa11.09□□□□□ -0.63
BRPF3-201ENST00000339717 ADOQ96SZ5 270 aa11.09□□□□□ -0.63
BRPF3-201ENST00000339717 IL36BQ9NZH7 164 aa11.09□□□□□ -0.63
BRPF3-201ENST00000339717 CACNG4Q9UBN1 327 aa11.09□□□□□ -0.63
BRPF3-201ENST00000339717 TRBV6-7A0A0A0MS04 114 aa11.09□□□□□ -0.63
BRPF3-201ENST00000339717 A0A0G2JK05 382 aa11.09□□□□□ -0.63
BRPF3-201ENST00000339717 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.09□□□□□ -0.63
BRPF3-201ENST00000339717 PLPP1O14494 284 aa11.09□□□□□ -0.63
BRPF3-201ENST00000339717 ANKRD55Q3KP44 614 aa11.09□□□□□ -0.63
BRPF3-201ENST00000339717 RNF39Q9H2S5 420 aa11.09□□□□□ -0.63
BRPF3-201ENST00000339717 AURKAIP1Q9NWT8 199 aaPredicted RBP11.09□□□□□ -0.63
BRPF3-201ENST00000339717 DAPP1Q9UN19 280 aa11.09□□□□□ -0.63
BRPF3-201ENST00000339717 NPIPB15A6NHN6 443 aaPredicted RBP11.09□□□□□ -0.63
BRPF3-201ENST00000339717 FUT6P51993 359 aa11.09□□□□□ -0.63
BRPF3-201ENST00000339717 EDDM3BP56851 147 aa11.09□□□□□ -0.63
BRPF3-201ENST00000339717 CLDN2P57739 230 aa11.09□□□□□ -0.63
BRPF3-201ENST00000339717 RIGQ13278 110 aa11.09□□□□□ -0.63
BRPF3-201ENST00000339717 C1orf140Q5VVS0 124 aa11.09□□□□□ -0.63
BRPF3-201ENST00000339717 CALHM1Q8IU99 346 aa11.09□□□□□ -0.63
BRPF3-201ENST00000339717 ABHD5Q8WTS1 349 aa11.09□□□□□ -0.63
BRPF3-201ENST00000339717 SPANXDQ9BXN6 97 aa11.09□□□□□ -0.63
BRPF3-201ENST00000339717 UFC1Q9Y3C8 167 aa11.09□□□□□ -0.63
BRPF3-201ENST00000339717 LINC01553A4QN01 128 aa11.08□□□□□ -0.64
BRPF3-201ENST00000339717 RNF126Q9BV68 326 aa11.08□□□□□ -0.64
BRPF3-201ENST00000339717 PBOV1Q9GZY1 135 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms