RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 SLC22A1O15245 554 aa12.27□□□□□ -0.45
PRKN-201ENST00000338468 FAM90A15PP0C7V4 464 aa12.27□□□□□ -0.45
PRKN-201ENST00000338468 FAM90A13PP0C7W8 464 aa12.27□□□□□ -0.45
PRKN-201ENST00000338468 FAM90A14PP0C7W9 464 aa12.27□□□□□ -0.45
PRKN-201ENST00000338468 FAM90A24PP0C7X0 464 aa12.27□□□□□ -0.45
PRKN-201ENST00000338468 VSIG8P0DPA2 414 aa12.27□□□□□ -0.45
PRKN-201ENST00000338468 NFYBP25208 207 aa12.27□□□□□ -0.45
PRKN-201ENST00000338468 GABARAPL2P60520 117 aa12.27□□□□□ -0.45
PRKN-201ENST00000338468 QRFPP83859 136 aa12.27□□□□□ -0.45
PRKN-201ENST00000338468 EMX1Q04741 257 aaPredicted RBP12.27□□□□□ -0.45
PRKN-201ENST00000338468 TRAM1Q15629 374 aa12.27□□□□□ -0.45
PRKN-201ENST00000338468 HLA-DRB5Q30154 266 aa12.27□□□□□ -0.45
PRKN-201ENST00000338468 FBLN7Q53RD9 439 aa12.27□□□□□ -0.45
PRKN-201ENST00000338468 GLT8D1Q68CQ7 371 aa12.27□□□□□ -0.45
PRKN-201ENST00000338468 RAB12Q6IQ22 244 aa12.27□□□□□ -0.45
PRKN-201ENST00000338468 LIAT1Q6ZQX7 453 aa12.27□□□□□ -0.45
PRKN-201ENST00000338468 ZNF367Q7RTV3 350 aa12.27□□□□□ -0.45
PRKN-201ENST00000338468 TMEM219Q86XT9 240 aa12.27□□□□□ -0.45
PRKN-201ENST00000338468 GAPTQ8N292 157 aa12.27□□□□□ -0.45
PRKN-201ENST00000338468 ZNF596Q8TC21 504 aa12.27□□□□□ -0.45
PRKN-201ENST00000338468 CITED1Q99966 193 aa12.27□□□□□ -0.45
PRKN-201ENST00000338468 SPACA1Q9HBV2 294 aa12.27□□□□□ -0.45
PRKN-201ENST00000338468 GHRLQ9UBU3 117 aa12.27□□□□□ -0.45
PRKN-201ENST00000338468 SIGLEC9Q9Y336 463 aa12.27□□□□□ -0.45
PRKN-201ENST00000338468 RRP15Q9Y3B9 282 aaKnown RBP12.27□□□□□ -0.45
PRKN-201ENST00000338468 BUB1B-PAK6H3BSN5 160 aa12.26□□□□□ -0.45
PRKN-201ENST00000338468 IGHV3-7P01780 117 aa12.26□□□□□ -0.45
PRKN-201ENST00000338468 UBBP0CG47 229 aa12.26□□□□□ -0.45
PRKN-201ENST00000338468 PSMA1P25786 263 aaKnown RBP12.26□□□□□ -0.45
PRKN-201ENST00000338468 GABRA5P31644 462 aa12.26□□□□□ -0.45
PRKN-201ENST00000338468 UNC119Q13432 240 aa12.26□□□□□ -0.45
PRKN-201ENST00000338468 LTC4SQ16873 150 aa12.26□□□□□ -0.45
PRKN-201ENST00000338468 FAM53AQ6NSI3 398 aaPredicted RBP12.26□□□□□ -0.45
PRKN-201ENST00000338468 OR9G1Q8NH87 305 aa12.26□□□□□ -0.45
PRKN-201ENST00000338468 UBALD1Q8TB05 177 aa12.26□□□□□ -0.45
PRKN-201ENST00000338468 CCDC107Q8WV48 283 aa12.26□□□□□ -0.45
PRKN-201ENST00000338468 FBLN5Q9UBX5 448 aa12.26□□□□□ -0.45
PRKN-201ENST00000338468 PSG11Q9UQ72 335 aa12.26□□□□□ -0.45
PRKN-201ENST00000338468 PEX16Q9Y5Y5 336 aa12.26□□□□□ -0.45
PRKN-201ENST00000338468 NOTCH1P46531 2555 aa12.26□□□□□ -0.45
PRKN-201ENST00000338468 TMEM14DPA8MWL7 114 aa12.25□□□□□ -0.45
PRKN-201ENST00000338468 LEUTXA8MZ59 168 aa12.25□□□□□ -0.45
PRKN-201ENST00000338468 MCRIP1C9JLW8 97 aa12.25□□□□□ -0.45
PRKN-201ENST00000338468 J3QR06 171 aa12.25□□□□□ -0.45
PRKN-201ENST00000338468 MPIG6BO95866 241 aa12.25□□□□□ -0.45
PRKN-201ENST00000338468 GZMHP20718 246 aa12.25□□□□□ -0.45
PRKN-201ENST00000338468 FUT3P21217 361 aa12.25□□□□□ -0.45
PRKN-201ENST00000338468 HTR2CP28335 458 aa12.25□□□□□ -0.45
PRKN-201ENST00000338468 KIR2DS4P43632 304 aa12.25□□□□□ -0.45
PRKN-201ENST00000338468 TPTE2P1Q5T6R2 138 aa12.25□□□□□ -0.45
PRKN-201ENST00000338468 SPARTQ8N0X7 666 aa12.25□□□□□ -0.45
PRKN-201ENST00000338468 OR10A7Q8NGE5 316 aa12.25□□□□□ -0.45
PRKN-201ENST00000338468 NEK7Q8TDX7 302 aa12.25□□□□□ -0.45
PRKN-201ENST00000338468 CST11Q9H112 138 aa12.25□□□□□ -0.45
PRKN-201ENST00000338468 MMP28Q9H239 520 aa12.25□□□□□ -0.45
PRKN-201ENST00000338468 RANBP3Q9H6Z4 567 aaPredicted RBP12.25□□□□□ -0.45
PRKN-201ENST00000338468 RAB18Q9NP72 206 aa12.25□□□□□ -0.45
PRKN-201ENST00000338468 ABCB10Q9NRK6 738 aa12.25□□□□□ -0.45
PRKN-201ENST00000338468 ETAA1Q9NY74 926 aa12.25□□□□□ -0.45
PRKN-201ENST00000338468 AK6Q9Y3D8 172 aaKnown RBP12.25□□□□□ -0.45
PRKN-201ENST00000338468 PRKDCP78527 4128 aaKnown RBP12.25□□□□□ -0.45
PRKN-201ENST00000338468 A0A0A6YYD4 124 aa12.24□□□□□ -0.45
PRKN-201ENST00000338468 SHISA3A0PJX4 238 aa12.24□□□□□ -0.45
PRKN-201ENST00000338468 AIPO00170 330 aa12.24□□□□□ -0.45
PRKN-201ENST00000338468 F2RL2O00254 374 aa12.24□□□□□ -0.45
PRKN-201ENST00000338468 TOR1AO14656 332 aa12.24□□□□□ -0.45
PRKN-201ENST00000338468 ORC5O43913 435 aa12.24□□□□□ -0.45
PRKN-201ENST00000338468 MRPS14O60783 128 aaKnown RBP12.24□□□□□ -0.45
PRKN-201ENST00000338468 PDCD6O75340 191 aa12.24□□□□□ -0.45
PRKN-201ENST00000338468 ARL6IP5O75915 188 aa12.24□□□□□ -0.45
PRKN-201ENST00000338468 GLAP06280 429 aa12.24□□□□□ -0.45
PRKN-201ENST00000338468 CD24P25063 80 aa12.24□□□□□ -0.45
PRKN-201ENST00000338468 CALRP27797 417 aaKnown RBP12.24□□□□□ -0.45
PRKN-201ENST00000338468 CHATP28329 748 aa12.24□□□□□ -0.45
PRKN-201ENST00000338468 EFNB2P52799 333 aa12.24□□□□□ -0.45
PRKN-201ENST00000338468 PRRX1P54821 245 aa12.24□□□□□ -0.45
PRKN-201ENST00000338468 LOXL3P58215 753 aa12.24□□□□□ -0.45
PRKN-201ENST00000338468 RPS27AP62979 156 aaKnown RBP12.24□□□□□ -0.45
PRKN-201ENST00000338468 DIAPH2-AS1Q14236 149 aa12.24□□□□□ -0.45
PRKN-201ENST00000338468 RBM39Q14498 530 aaKnown RBP12.24□□□□□ -0.45
PRKN-201ENST00000338468 SYT6Q5T7P8 510 aaPredicted RBP12.24□□□□□ -0.45
PRKN-201ENST00000338468 UBE2UQ5VVX9 321 aa12.24□□□□□ -0.45
PRKN-201ENST00000338468 CD200R1LQ6Q8B3 271 aa12.24□□□□□ -0.45
PRKN-201ENST00000338468 OR6M1Q8NGM8 313 aa12.24□□□□□ -0.45
PRKN-201ENST00000338468 OR4K15Q8NH41 348 aa12.24□□□□□ -0.45
PRKN-201ENST00000338468 ARL11Q969Q4 196 aa12.24□□□□□ -0.45
PRKN-201ENST00000338468 TM2D1Q9BX74 207 aa12.24□□□□□ -0.45
PRKN-201ENST00000338468 Q9H521 79 aa12.24□□□□□ -0.45
PRKN-201ENST00000338468 ZNF702PQ9H963 129 aa12.24□□□□□ -0.45
PRKN-201ENST00000338468 NDUFB11Q9NX14 153 aa12.24□□□□□ -0.45
PRKN-201ENST00000338468 A0A1W2PPE3 182 aa12.23□□□□□ -0.45
PRKN-201ENST00000338468 UBE2QL1A1L167 161 aa12.23□□□□□ -0.45
PRKN-201ENST00000338468 C12orf77C9JDV5 145 aa12.23□□□□□ -0.45
PRKN-201ENST00000338468 SLC17A2O00624 439 aa12.23□□□□□ -0.45
PRKN-201ENST00000338468 BPNT1O95861 308 aa12.23□□□□□ -0.45
PRKN-201ENST00000338468 RCC1P18754 421 aaPredicted RBP12.23□□□□□ -0.45
PRKN-201ENST00000338468 GNG10P50151 68 aa12.23□□□□□ -0.45
PRKN-201ENST00000338468 P2RY14Q15391 338 aa12.23□□□□□ -0.45
PRKN-201ENST00000338468 Q6ZS46 218 aa12.23□□□□□ -0.45
PRKN-201ENST00000338468 SLC16A12Q6ZSM3 486 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms