RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 CREB3L1Q96BA8 519 aa11.37□□□□□ -0.59
LIMS1-201ENST00000332345 TM2D1Q9BX74 207 aa11.37□□□□□ -0.59
LIMS1-201ENST00000332345 VCX3AQ9NNX9 186 aa11.37□□□□□ -0.59
LIMS1-201ENST00000332345 RAB9BQ9NP90 201 aa11.37□□□□□ -0.59
LIMS1-201ENST00000332345 IDI2-AS1Q9NZ38 188 aa11.37□□□□□ -0.59
LIMS1-201ENST00000332345 STEAP1Q9UHE8 339 aa11.37□□□□□ -0.59
LIMS1-201ENST00000332345 TRAPPC2LQ9UL33 140 aa11.37□□□□□ -0.59
LIMS1-201ENST00000332345 UBE2QL1A1L167 161 aa11.36□□□□□ -0.59
LIMS1-201ENST00000332345 NPIPB11E5RHQ5 1161 aa11.36□□□□□ -0.59
LIMS1-201ENST00000332345 AIPO00170 330 aa11.36□□□□□ -0.59
LIMS1-201ENST00000332345 ORC5O43913 435 aa11.36□□□□□ -0.59
LIMS1-201ENST00000332345 RAB3BP20337 219 aa11.36□□□□□ -0.59
LIMS1-201ENST00000332345 CD34P28906 385 aa11.36□□□□□ -0.59
LIMS1-201ENST00000332345 UNC119Q13432 240 aa11.36□□□□□ -0.59
LIMS1-201ENST00000332345 SSX2Q16385 188 aa11.36□□□□□ -0.59
LIMS1-201ENST00000332345 LRRC75BQ2VPJ9 315 aa11.36□□□□□ -0.59
LIMS1-201ENST00000332345 C2orf76Q3KRA6 126 aa11.36□□□□□ -0.59
LIMS1-201ENST00000332345 SIGIRRQ6IA17 410 aa11.36□□□□□ -0.59
LIMS1-201ENST00000332345 OR51D1Q8NGF3 324 aa11.36□□□□□ -0.59
LIMS1-201ENST00000332345 ARL11Q969Q4 196 aa11.36□□□□□ -0.59
LIMS1-201ENST00000332345 FAM3DQ96BQ1 224 aa11.36□□□□□ -0.59
LIMS1-201ENST00000332345 KIRREL1Q96J84 757 aa11.36□□□□□ -0.59
LIMS1-201ENST00000332345 TXNL4BQ9NX01 149 aaKnown RBP11.36□□□□□ -0.59
LIMS1-201ENST00000332345 DPM3Q9P2X0 92 aa11.36□□□□□ -0.59
LIMS1-201ENST00000332345 VPREB3Q9UKI3 123 aa11.36□□□□□ -0.59
LIMS1-201ENST00000332345 A0A087X0M5 115 aa11.35□□□□□ -0.59
LIMS1-201ENST00000332345 TRAV39A0A0B4J263 110 aa11.35□□□□□ -0.59
LIMS1-201ENST00000332345 A0A1B0GX30 115 aa11.35□□□□□ -0.59
LIMS1-201ENST00000332345 H3BUX3 64 aa11.35□□□□□ -0.59
LIMS1-201ENST00000332345 GPR137BO60478 399 aa11.35□□□□□ -0.59
LIMS1-201ENST00000332345 BLVRBP30043 206 aaPredicted RBP11.35□□□□□ -0.59
LIMS1-201ENST00000332345 GDNFP39905 211 aa11.35□□□□□ -0.59
LIMS1-201ENST00000332345 CEACAM3P40198 252 aa11.35□□□□□ -0.59
LIMS1-201ENST00000332345 FAM189A2Q15884 450 aa11.35□□□□□ -0.59
LIMS1-201ENST00000332345 NKAPLQ5M9Q1 402 aa11.35□□□□□ -0.59
LIMS1-201ENST00000332345 C6orf183Q5T699 404 aa11.35□□□□□ -0.59
LIMS1-201ENST00000332345 TRAT1Q6PIZ9 186 aa11.35□□□□□ -0.59
LIMS1-201ENST00000332345 BAIAP2L2Q6UXY1 529 aa11.35□□□□□ -0.59
LIMS1-201ENST00000332345 TPRA1Q86W33 373 aa11.35□□□□□ -0.59
LIMS1-201ENST00000332345 GAPTQ8N292 157 aa11.35□□□□□ -0.59
LIMS1-201ENST00000332345 OR9G1Q8NH87 305 aa11.35□□□□□ -0.59
LIMS1-201ENST00000332345 ABCB10Q9NRK6 738 aa11.35□□□□□ -0.59
LIMS1-201ENST00000332345 PLEKHJ1Q9NW61 149 aa11.35□□□□□ -0.59
LIMS1-201ENST00000332345 KCNIP1Q9NZI2 227 aa11.35□□□□□ -0.59
LIMS1-201ENST00000332345 FBLN5Q9UBX5 448 aa11.35□□□□□ -0.59
LIMS1-201ENST00000332345 RAB22AQ9UL26 194 aa11.35□□□□□ -0.59
LIMS1-201ENST00000332345 HILPDAQ9Y5L2 63 aa11.35□□□□□ -0.59
LIMS1-201ENST00000332345 STAB1Q9NY15 2570 aa11.34□□□□□ -0.59
LIMS1-201ENST00000332345 A0A1B0GUS0 222 aa11.34□□□□□ -0.59
LIMS1-201ENST00000332345 IFITM5A6NNB3 132 aa11.34□□□□□ -0.59
LIMS1-201ENST00000332345 VGLL3A8MV65 326 aa11.34□□□□□ -0.59
LIMS1-201ENST00000332345 LEUTXA8MZ59 168 aa11.34□□□□□ -0.59
LIMS1-201ENST00000332345 SPINT2O43291 252 aa11.34□□□□□ -0.59
LIMS1-201ENST00000332345 IGLV1-47P01700 117 aa11.34□□□□□ -0.59
LIMS1-201ENST00000332345 CD36P16671 472 aa11.34□□□□□ -0.59
LIMS1-201ENST00000332345 CHATP28329 748 aa11.34□□□□□ -0.59
LIMS1-201ENST00000332345 SSTR5P35346 364 aa11.34□□□□□ -0.59
LIMS1-201ENST00000332345 ARHGDIBP52566 201 aa11.34□□□□□ -0.59
LIMS1-201ENST00000332345 CLDN12P56749 244 aa11.34□□□□□ -0.59
LIMS1-201ENST00000332345 LTC4SQ16873 150 aa11.34□□□□□ -0.59
LIMS1-201ENST00000332345 AWAT1Q58HT5 328 aa11.34□□□□□ -0.59
LIMS1-201ENST00000332345 HES5Q5TA89 166 aa11.34□□□□□ -0.59
LIMS1-201ENST00000332345 FAM89BQ8N5H3 189 aa11.34□□□□□ -0.59
LIMS1-201ENST00000332345 C3orf56Q8N813 242 aa11.34□□□□□ -0.59
LIMS1-201ENST00000332345 OR52M1Q8NGK5 317 aa11.34□□□□□ -0.59
LIMS1-201ENST00000332345 OR4P4Q8NGL7 312 aa11.34□□□□□ -0.59
LIMS1-201ENST00000332345 OR4F5Q8NH21 305 aa11.34□□□□□ -0.59
LIMS1-201ENST00000332345 OR4K15Q8NH41 348 aa11.34□□□□□ -0.59
LIMS1-201ENST00000332345 KCTD7Q96MP8 289 aa11.34□□□□□ -0.59
LIMS1-201ENST00000332345 FAAP24Q9BTP7 215 aa11.34□□□□□ -0.59
LIMS1-201ENST00000332345 LPAR5Q9H1C0 372 aa11.34□□□□□ -0.59
LIMS1-201ENST00000332345 OR51E2Q9H255 320 aa11.34□□□□□ -0.59
LIMS1-201ENST00000332345 KCNK15Q9H427 330 aa11.34□□□□□ -0.59
LIMS1-201ENST00000332345 ZNF286AQ9HBT8 521 aa11.34□□□□□ -0.59
LIMS1-201ENST00000332345 RAB18Q9NP72 206 aa11.34□□□□□ -0.59
LIMS1-201ENST00000332345 SHISA3A0PJX4 238 aa11.33□□□□□ -0.6
LIMS1-201ENST00000332345 FAM172BPA6NC97 362 aa11.33□□□□□ -0.6
LIMS1-201ENST00000332345 POM121CA8CG34 1229 aa11.33□□□□□ -0.6
LIMS1-201ENST00000332345 C15orf65H3BRN8 121 aa11.33□□□□□ -0.6
LIMS1-201ENST00000332345 BUB1B-PAK6H3BSN5 160 aa11.33□□□□□ -0.6
LIMS1-201ENST00000332345 J3QR06 171 aa11.33□□□□□ -0.6
LIMS1-201ENST00000332345 NDUFA7O95182 113 aa11.33□□□□□ -0.6
LIMS1-201ENST00000332345 PAX6P26367 422 aa11.33□□□□□ -0.6
LIMS1-201ENST00000332345 CFPP27918 469 aa11.33□□□□□ -0.6
LIMS1-201ENST00000332345 DYNLT3P51808 116 aa11.33□□□□□ -0.6
LIMS1-201ENST00000332345 OR10A3P58181 314 aa11.33□□□□□ -0.6
LIMS1-201ENST00000332345 HLA-DRB5Q30154 266 aa11.33□□□□□ -0.6
LIMS1-201ENST00000332345 TMEM30BQ3MIR4 351 aa11.33□□□□□ -0.6
LIMS1-201ENST00000332345 TIMM50Q3ZCQ8 353 aa11.33□□□□□ -0.6
LIMS1-201ENST00000332345 LDLRAD2Q5SZI1 272 aa11.33□□□□□ -0.6
LIMS1-201ENST00000332345 LIAT1Q6ZQX7 453 aa11.33□□□□□ -0.6
LIMS1-201ENST00000332345 C6orf201Q7Z4U5 140 aa11.33□□□□□ -0.6
LIMS1-201ENST00000332345 ZNF554Q86TJ5 538 aa11.33□□□□□ -0.6
LIMS1-201ENST00000332345 DYNAPQ8N1N2 210 aa11.33□□□□□ -0.6
LIMS1-201ENST00000332345 OR56B1Q8NGI3 324 aa11.33□□□□□ -0.6
LIMS1-201ENST00000332345 CHCHD6Q9BRQ6 235 aa11.33□□□□□ -0.6
LIMS1-201ENST00000332345 NICN1Q9BSH3 213 aa11.33□□□□□ -0.6
LIMS1-201ENST00000332345 MMP28Q9H239 520 aa11.33□□□□□ -0.6
LIMS1-201ENST00000332345 RIMS4Q9H426 269 aaPredicted RBP11.33□□□□□ -0.6
LIMS1-201ENST00000332345 ZNF696Q9H7X3 374 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms