RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 KIF25Q9UIL4 384 aa4.28□□□□□ -1.72
LRIT3-201ENST00000327908 ZNF462Q96JM2 2506 aa4.28□□□□□ -1.72
LRIT3-201ENST00000327908 DYSFO75923 2080 aa4.28□□□□□ -1.72
LRIT3-201ENST00000327908 A0A096LNT2 108 aa4.28□□□□□ -1.72
LRIT3-201ENST00000327908 ZNF736B4DX44 427 aaPredicted RBP4.28□□□□□ -1.72
LRIT3-201ENST00000327908 WNT9BO14905 357 aa4.28□□□□□ -1.72
LRIT3-201ENST00000327908 HPGDSO60760 199 aa4.28□□□□□ -1.72
LRIT3-201ENST00000327908 SCAF4O95104 1147 aaKnown RBP4.28□□□□□ -1.72
LRIT3-201ENST00000327908 APOA2P02652 100 aa4.28□□□□□ -1.72
LRIT3-201ENST00000327908 FCER2P06734 321 aa4.28□□□□□ -1.72
LRIT3-201ENST00000327908 MC5RP33032 325 aa4.28□□□□□ -1.72
LRIT3-201ENST00000327908 PPP5CP53041 499 aa4.28□□□□□ -1.72
LRIT3-201ENST00000327908 EDDM3AQ14507 147 aa4.28□□□□□ -1.72
LRIT3-201ENST00000327908 THOC7Q6I9Y2 204 aaKnown RBP4.28□□□□□ -1.72
LRIT3-201ENST00000327908 ZNF66Q6ZN08 573 aa4.28□□□□□ -1.72
LRIT3-201ENST00000327908 KCTD9Q7L273 389 aa4.28□□□□□ -1.72
LRIT3-201ENST00000327908 THNSL2Q86YJ6 484 aa4.28□□□□□ -1.72
LRIT3-201ENST00000327908 CMTM1Q8IZ96 169 aa4.28□□□□□ -1.72
LRIT3-201ENST00000327908 POC5Q8NA72 575 aa4.28□□□□□ -1.72
LRIT3-201ENST00000327908 BEST4Q8NFU0 473 aa4.28□□□□□ -1.72
LRIT3-201ENST00000327908 GIMAP1Q8WWP7 306 aa4.28□□□□□ -1.72
LRIT3-201ENST00000327908 ARL11Q969Q4 196 aa4.28□□□□□ -1.72
LRIT3-201ENST00000327908 MALSU1Q96EH3 234 aa4.28□□□□□ -1.72
LRIT3-201ENST00000327908 C1RLQ9NZP8 487 aa4.28□□□□□ -1.72
LRIT3-201ENST00000327908 ANXA10Q9UJ72 324 aa4.28□□□□□ -1.72
LRIT3-201ENST00000327908 NUP50Q9UKX7 468 aa4.28□□□□□ -1.72
LRIT3-201ENST00000327908 PRELID3BQ9Y3B1 194 aa4.28□□□□□ -1.72
LRIT3-201ENST00000327908 LAMA1P25391 3075 aa4.27□□□□□ -1.73
LRIT3-201ENST00000327908 RNF223E7ERA6 249 aa4.27□□□□□ -1.73
LRIT3-201ENST00000327908 SDCBPO00560 298 aaPredicted RBP4.27□□□□□ -1.73
LRIT3-201ENST00000327908 GAPDHP04406 335 aaKnown RBP4.27□□□□□ -1.73
LRIT3-201ENST00000327908 FGF2P09038 288 aa4.27□□□□□ -1.73
LRIT3-201ENST00000327908 FBP1P09467 338 aa4.27□□□□□ -1.73
LRIT3-201ENST00000327908 TNFSF8P32971 234 aa4.27□□□□□ -1.73
LRIT3-201ENST00000327908 THBS3P49746 956 aa4.27□□□□□ -1.73
LRIT3-201ENST00000327908 LUMP51884 338 aaPredicted RBP4.27□□□□□ -1.73
LRIT3-201ENST00000327908 CRIP3Q6Q6R5 217 aa4.27□□□□□ -1.73
LRIT3-201ENST00000327908 FAM216BQ8N7L0 139 aa4.27□□□□□ -1.73
LRIT3-201ENST00000327908 TMEM104Q8NE00 496 aa4.27□□□□□ -1.73
LRIT3-201ENST00000327908 OR2AK2Q8NG84 335 aa4.27□□□□□ -1.73
LRIT3-201ENST00000327908 OR4M1Q8NGD0 313 aa4.27□□□□□ -1.73
LRIT3-201ENST00000327908 OR5AP2Q8NGF4 316 aa4.27□□□□□ -1.73
LRIT3-201ENST00000327908 SLC2A8Q9NY64 477 aa4.27□□□□□ -1.73
LRIT3-201ENST00000327908 POMT1Q9Y6A1 747 aa4.27□□□□□ -1.73
LRIT3-201ENST00000327908 ATRXP46100 2492 aa4.27□□□□□ -1.73
LRIT3-201ENST00000327908 SPDEFO95238 335 aa4.27□□□□□ -1.73
LRIT3-201ENST00000327908 ANXA3P12429 323 aa4.27□□□□□ -1.73
LRIT3-201ENST00000327908 ELK1P19419 428 aa4.27□□□□□ -1.73
LRIT3-201ENST00000327908 RFX2P48378 723 aa4.27□□□□□ -1.73
LRIT3-201ENST00000327908 ZNF137PP52743 207 aa4.27□□□□□ -1.73
LRIT3-201ENST00000327908 KRTAP10-9P60411 292 aa4.27□□□□□ -1.73
LRIT3-201ENST00000327908 ZNF816Q0VGE8 651 aaPredicted RBP4.27□□□□□ -1.73
LRIT3-201ENST00000327908 DBPQ10586 325 aaPredicted RBP4.27□□□□□ -1.73
LRIT3-201ENST00000327908 OLFML2AQ68BL7 652 aa4.27□□□□□ -1.73
LRIT3-201ENST00000327908 SFRP4Q6FHJ7 346 aaPredicted RBP4.27□□□□□ -1.73
LRIT3-201ENST00000327908 SLC38A6Q8IZM9 456 aa4.27□□□□□ -1.73
LRIT3-201ENST00000327908 ZDHHC22Q8N966 263 aa4.27□□□□□ -1.73
LRIT3-201ENST00000327908 ZNF488Q96MN9 340 aa4.27□□□□□ -1.73
LRIT3-201ENST00000327908 TSC22D3Q99576 134 aa4.27□□□□□ -1.73
LRIT3-201ENST00000327908 HSD17B10Q99714 261 aaKnown RBP4.27□□□□□ -1.73
LRIT3-201ENST00000327908 SOSTQ9BQB4 213 aa4.27□□□□□ -1.73
LRIT3-201ENST00000327908 SULT4A1Q9BR01 284 aa4.27□□□□□ -1.73
LRIT3-201ENST00000327908 DCUN1D5Q9BTE7 237 aa4.27□□□□□ -1.73
LRIT3-201ENST00000327908 NAA50Q9GZZ1 169 aaKnown RBP4.27□□□□□ -1.73
LRIT3-201ENST00000327908 SIRPDQ9H106 197 aa4.27□□□□□ -1.73
LRIT3-201ENST00000327908 WDR13Q9H1Z4 485 aa4.27□□□□□ -1.73
LRIT3-201ENST00000327908 C14orf166Q9Y224 244 aaKnown RBP4.27□□□□□ -1.73
LRIT3-201ENST00000327908 CHD3Q12873 2000 aaKnown RBP4.27□□□□□ -1.73
LRIT3-201ENST00000327908 PAHP00439 452 aa4.27□□□□□ -1.73
LRIT3-201ENST00000327908 TGFAP01135 160 aa4.27□□□□□ -1.73
LRIT3-201ENST00000327908 CD74P04233 296 aa4.27□□□□□ -1.73
LRIT3-201ENST00000327908 EIF4EP06730 217 aaKnown RBP4.27□□□□□ -1.73
LRIT3-201ENST00000327908 IGHV1-8P0DP01 117 aa4.27□□□□□ -1.73
LRIT3-201ENST00000327908 RPA2P15927 270 aa4.27□□□□□ -1.73
LRIT3-201ENST00000327908 HTR1DP28221 377 aa4.27□□□□□ -1.73
LRIT3-201ENST00000327908 SNU13P55769 128 aaKnown RBP4.27□□□□□ -1.73
LRIT3-201ENST00000327908 RND3P61587 244 aa4.27□□□□□ -1.73
LRIT3-201ENST00000327908 MADCAM1Q13477 382 aa4.27□□□□□ -1.73
LRIT3-201ENST00000327908 INSL4Q14641 139 aa4.27□□□□□ -1.73
LRIT3-201ENST00000327908 TOMM5Q8N4H5 51 aa4.27□□□□□ -1.73
LRIT3-201ENST00000327908 OR5H6Q8NGV6 325 aa4.27□□□□□ -1.73
LRIT3-201ENST00000327908 OR6F1Q8NGZ6 308 aa4.27□□□□□ -1.73
LRIT3-201ENST00000327908 OR4K15Q8NH41 348 aa4.27□□□□□ -1.73
LRIT3-201ENST00000327908 MS4A7Q9GZW8 240 aaPredicted RBP4.27□□□□□ -1.73
LRIT3-201ENST00000327908 TAF9BQ9HBM6 251 aa4.27□□□□□ -1.73
LRIT3-201ENST00000327908 HIF1ANQ9NWT6 349 aa4.27□□□□□ -1.73
LRIT3-201ENST00000327908 DPM3Q9P2X0 92 aa4.27□□□□□ -1.73
LRIT3-201ENST00000327908 CTSZQ9UBR2 303 aa4.27□□□□□ -1.73
LRIT3-201ENST00000327908 METRNQ9UJH8 293 aa4.27□□□□□ -1.73
LRIT3-201ENST00000327908 RBMX2Q9Y388 322 aaKnown RBP4.27□□□□□ -1.73
LRIT3-201ENST00000327908 FAM96BQ9Y3D0 163 aa4.27□□□□□ -1.73
LRIT3-201ENST00000327908 RBM7Q9Y580 266 aaKnown RBP4.27□□□□□ -1.73
LRIT3-201ENST00000327908 ALPK2Q86TB3 2170 aa4.26□□□□□ -1.73
LRIT3-201ENST00000327908 IGHV1-69DA0A0B4J2H0 117 aa4.26□□□□□ -1.73
LRIT3-201ENST00000327908 DUXBA0A1W2PPF3 345 aa4.26□□□□□ -1.73
LRIT3-201ENST00000327908 SHISA3A0PJX4 238 aa4.26□□□□□ -1.73
LRIT3-201ENST00000327908 UBE2QL1A1L167 161 aa4.26□□□□□ -1.73
LRIT3-201ENST00000327908 RAB29O14966 203 aa4.26□□□□□ -1.73
LRIT3-201ENST00000327908 SOCS1O15524 211 aa4.26□□□□□ -1.73
LRIT3-201ENST00000327908 IGHV1-69P01742 117 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms