RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 OR51M1Q9H341 326 aa6.99□□□□□ -1.29
CIITA-201ENST00000324288 CCDC168Q8NDH2 2452 aa6.99□□□□□ -1.29
CIITA-201ENST00000324288 NGFP01138 241 aa6.99□□□□□ -1.29
CIITA-201ENST00000324288 HOXB3P14651 431 aaPredicted RBP6.99□□□□□ -1.29
CIITA-201ENST00000324288 CXCL2P19875 107 aa6.99□□□□□ -1.29
CIITA-201ENST00000324288 SRSF5Q13243 272 aaKnown RBP6.99□□□□□ -1.29
CIITA-201ENST00000324288 CHAC2Q8WUX2 184 aa6.99□□□□□ -1.29
CIITA-201ENST00000324288 C4orf45Q96LM5 186 aa6.99□□□□□ -1.29
CIITA-201ENST00000324288 PRRX1P54821 245 aa6.99□□□□□ -1.29
CIITA-201ENST00000324288 ABCA2Q9BZC7 2435 aa6.99□□□□□ -1.29
CIITA-201ENST00000324288 IGLV3-10A0A075B6K4 115 aa6.99□□□□□ -1.29
CIITA-201ENST00000324288 H0YIG0 161 aa6.99□□□□□ -1.29
CIITA-201ENST00000324288 DCAF12L2Q5VW00 463 aa6.99□□□□□ -1.29
CIITA-201ENST00000324288 THSD4Q6ZMP0 1018 aa6.99□□□□□ -1.29
CIITA-201ENST00000324288 MYOZ1Q9NP98 299 aaPredicted RBP6.99□□□□□ -1.29
CIITA-201ENST00000324288 A0A087WUJ7 227 aa6.99□□□□□ -1.29
CIITA-201ENST00000324288 DDTP30046 118 aa6.99□□□□□ -1.29
CIITA-201ENST00000324288 CTAG1AP78358 180 aa6.99□□□□□ -1.29
CIITA-201ENST00000324288 MARVELD1Q9BSK0 173 aa6.99□□□□□ -1.29
CIITA-201ENST00000324288 UBE2ZQ9H832 354 aaPredicted RBP6.99□□□□□ -1.29
CIITA-201ENST00000324288 SSC5DA1L4H1 1573 aa6.99□□□□□ -1.29
CIITA-201ENST00000324288 DHHO43323 396 aa6.99□□□□□ -1.29
CIITA-201ENST00000324288 LANCL1O43813 399 aa6.99□□□□□ -1.29
CIITA-201ENST00000324288 CD226Q15762 336 aa6.99□□□□□ -1.29
CIITA-201ENST00000324288 PRR7Q8TB68 274 aa6.99□□□□□ -1.29
CIITA-201ENST00000324288 PGLYRP4Q96LB8 373 aa6.99□□□□□ -1.29
CIITA-201ENST00000324288 SPOCK3Q9BQ16 436 aa6.99□□□□□ -1.29
CIITA-201ENST00000324288 LRRC61Q9BV99 259 aa6.99□□□□□ -1.29
CIITA-201ENST00000324288 CRISPLD2Q9H0B8 497 aa6.99□□□□□ -1.29
CIITA-201ENST00000324288 VSIG10L2P0DP72 767 aa6.99□□□□□ -1.29
CIITA-201ENST00000324288 CD82P27701 267 aa6.99□□□□□ -1.29
CIITA-201ENST00000324288 SPEM2Q0P670 501 aa6.99□□□□□ -1.29
CIITA-201ENST00000324288 PABPC1L2AQ5JQF8 200 aa6.99□□□□□ -1.29
CIITA-201ENST00000324288 WDFY2Q96P53 400 aa6.99□□□□□ -1.29
CIITA-201ENST00000324288 ARRDC5A6NEK1 342 aa6.98□□□□□ -1.29
CIITA-201ENST00000324288 ST8SIA5O15466 376 aa6.98□□□□□ -1.29
CIITA-201ENST00000324288 P01737 135 aa6.98□□□□□ -1.29
CIITA-201ENST00000324288 HLA-GP17693 338 aa6.98□□□□□ -1.29
CIITA-201ENST00000324288 RIPPLY3P57055 190 aa6.98□□□□□ -1.29
CIITA-201ENST00000324288 RHBDD2Q6NTF9 364 aa6.98□□□□□ -1.29
CIITA-201ENST00000324288 OTOSQ8NHW6 89 aa6.98□□□□□ -1.29
CIITA-201ENST00000324288 PLXND1Q9Y4D7 1925 aa6.98□□□□□ -1.29
CIITA-201ENST00000324288 TARM1B6A8C7 271 aa6.98□□□□□ -1.29
CIITA-201ENST00000324288 F2RL2O00254 374 aa6.98□□□□□ -1.29
CIITA-201ENST00000324288 FGF2P09038 288 aa6.98□□□□□ -1.29
CIITA-201ENST00000324288 TNFAIP6P98066 277 aaPredicted RBP6.98□□□□□ -1.29
CIITA-201ENST00000324288 SURF2Q15527 256 aaPredicted RBP6.98□□□□□ -1.29
CIITA-201ENST00000324288 SLC26A1Q9H2B4 701 aa6.98□□□□□ -1.29
CIITA-201ENST00000324288 KLF7O75840 302 aaPredicted RBP6.98□□□□□ -1.29
CIITA-201ENST00000324288 MSRB3Q8IXL7 192 aa6.98□□□□□ -1.29
CIITA-201ENST00000324288 LHFPL5Q8TAF8 219 aa6.98□□□□□ -1.29
CIITA-201ENST00000324288 TCRBV5S1A1TA0A578 114 aa6.98□□□□□ -1.29
CIITA-201ENST00000324288 GUSBP11Q6P575 273 aa6.98□□□□□ -1.29
CIITA-201ENST00000324288 DEFB124Q8NES8 71 aa6.98□□□□□ -1.29
CIITA-201ENST00000324288 MRGPRFQ96AM1 343 aa6.98□□□□□ -1.29
CIITA-201ENST00000324288 PRSS8Q16651 343 aa6.98□□□□□ -1.29
CIITA-201ENST00000324288 KIAA1644Q3SXP7 199 aa6.98□□□□□ -1.29
CIITA-201ENST00000324288 TGIF2-C20orf24A0A0A6YYL0 155 aa6.98□□□□□ -1.29
CIITA-201ENST00000324288 IGSF23A1L1A6 192 aa6.98□□□□□ -1.29
CIITA-201ENST00000324288 TMPRSS2O15393 492 aa6.98□□□□□ -1.29
CIITA-201ENST00000324288 PCMT1P22061 227 aa6.98□□□□□ -1.29
CIITA-201ENST00000324288 C21orf58P58505 322 aa6.98□□□□□ -1.29
CIITA-201ENST00000324288 LEMD1Q68G75 181 aa6.98□□□□□ -1.29
CIITA-201ENST00000324288 HCFC1P51610 2035 aa6.98□□□□□ -1.29
CIITA-201ENST00000324288 TNFRSF1AP19438 455 aa6.98□□□□□ -1.29
CIITA-201ENST00000324288 ARF6P62330 175 aa6.98□□□□□ -1.29
CIITA-201ENST00000324288 TMEM56Q96MV1 263 aa6.98□□□□□ -1.29
CIITA-201ENST00000324288 FOXB1Q99853 325 aa6.98□□□□□ -1.29
CIITA-201ENST00000324288 ZPBPQ9BS86 351 aa6.98□□□□□ -1.29
CIITA-201ENST00000324288 NRAPQ86VF7 1730 aa6.98□□□□□ -1.29
CIITA-201ENST00000324288 TRAV8-7A0A075B6U6 113 aa6.98□□□□□ -1.29
CIITA-201ENST00000324288 GRIFINA4D1Z8 144 aa6.98□□□□□ -1.29
CIITA-201ENST00000324288 ZNF117Q03924 483 aa6.98□□□□□ -1.29
CIITA-201ENST00000324288 DSCR4P56555 118 aaPredicted RBP6.98□□□□□ -1.29
CIITA-201ENST00000324288 PPP1CAP62136 330 aa6.98□□□□□ -1.29
CIITA-201ENST00000324288 NUP37Q8NFH4 326 aa6.98□□□□□ -1.29
CIITA-201ENST00000324288 CNRIP1Q96F85 164 aaPredicted RBP6.98□□□□□ -1.29
CIITA-201ENST00000324288 CLN8Q9UBY8 286 aa6.98□□□□□ -1.29
CIITA-201ENST00000324288 RABAC1Q9UI14 185 aa6.98□□□□□ -1.29
CIITA-201ENST00000324288 GBF1Q92538 1859 aa6.98□□□□□ -1.29
CIITA-201ENST00000324288 hADV38S2A0JD32 116 aa6.97□□□□□ -1.29
CIITA-201ENST00000324288 K7EQS6 105 aa6.97□□□□□ -1.29
CIITA-201ENST00000324288 AGFG2O95081 481 aa6.97□□□□□ -1.29
CIITA-201ENST00000324288 GALNSP34059 522 aa6.97□□□□□ -1.29
CIITA-201ENST00000324288 FZD5Q13467 585 aa6.97□□□□□ -1.29
CIITA-201ENST00000324288 MAFAQ8NHW3 353 aaPredicted RBP6.97□□□□□ -1.29
CIITA-201ENST00000324288 TM4SF19Q96DZ7 209 aa6.97□□□□□ -1.29
CIITA-201ENST00000324288 PARLQ9H300 379 aa6.97□□□□□ -1.29
CIITA-201ENST00000324288 MANBALQ9NQG1 85 aa6.97□□□□□ -1.29
CIITA-201ENST00000324288 TGFAP01135 160 aa6.97□□□□□ -1.29
CIITA-201ENST00000324288 PGA4P0DJD7 388 aa6.97□□□□□ -1.29
CIITA-201ENST00000324288 PGA5P0DJD9 388 aa6.97□□□□□ -1.29
CIITA-201ENST00000324288 RPS4Y1P22090 263 aaKnown RBP6.97□□□□□ -1.29
CIITA-201ENST00000324288 CDKN2AP42771 156 aaKnown RBP6.97□□□□□ -1.29
CIITA-201ENST00000324288 NPBWR2P48146 333 aa6.97□□□□□ -1.29
CIITA-201ENST00000324288 TM4SF4P48230 202 aa6.97□□□□□ -1.29
CIITA-201ENST00000324288 IL13RA2Q14627 380 aa6.97□□□□□ -1.29
CIITA-201ENST00000324288 GBGT1Q8N5D6 347 aa6.97□□□□□ -1.29
CIITA-201ENST00000324288 SPAG8Q99932 426 aaPredicted RBP6.97□□□□□ -1.29
CIITA-201ENST00000324288 SMPD2O60906 423 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms