RNA–Protein interactions for RNA: ENST00000319172.9

TMEM39A-201, Transcript of transmembrane protein 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39A, Length 4,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-201ENST00000319172 NAAAQ02083 359 aa7.97□□□□□ -1.13
TMEM39A-201ENST00000319172 PSG7Q13046 419 aa7.97□□□□□ -1.13
TMEM39A-201ENST00000319172 GABRA6Q16445 453 aa7.97□□□□□ -1.13
TMEM39A-201ENST00000319172 NSUN5P2Q63ZY6 315 aa7.97□□□□□ -1.13
TMEM39A-201ENST00000319172 RPUSD3Q6P087 351 aaKnown RBP7.97□□□□□ -1.13
TMEM39A-201ENST00000319172 TBC1D26Q86UD7 250 aa7.97□□□□□ -1.13
TMEM39A-201ENST00000319172 SCARB1Q8WTV0 552 aa7.97□□□□□ -1.13
TMEM39A-201ENST00000319172 MSI2Q96DH6 328 aaKnown RBP7.97□□□□□ -1.13
TMEM39A-201ENST00000319172 SHARPINQ9H0F6 387 aa7.97□□□□□ -1.13
TMEM39A-201ENST00000319172 RAB18Q9NP72 206 aa7.97□□□□□ -1.13
TMEM39A-201ENST00000319172 FAM212BQ9NTI7 297 aaPredicted RBP7.97□□□□□ -1.13
TMEM39A-201ENST00000319172 DLL3Q9NYJ7 618 aa7.97□□□□□ -1.13
TMEM39A-201ENST00000319172 RASL12Q9NYN1 266 aa7.97□□□□□ -1.13
TMEM39A-201ENST00000319172 IL36RNQ9UBH0 155 aa7.97□□□□□ -1.13
TMEM39A-201ENST00000319172 FBXO7Q9Y3I1 522 aa7.97□□□□□ -1.13
TMEM39A-201ENST00000319172 A0A1W2PPV4 95 aa7.97□□□□□ -1.13
TMEM39A-201ENST00000319172 CDRT15L2A8MXV6 281 aa7.97□□□□□ -1.13
TMEM39A-201ENST00000319172 MFNGO00587 321 aa7.97□□□□□ -1.13
TMEM39A-201ENST00000319172 ZBTB37Q5TC79 503 aa7.97□□□□□ -1.13
TMEM39A-201ENST00000319172 FAM57AQ8TBR7 257 aa7.97□□□□□ -1.13
TMEM39A-201ENST00000319172 MRPL24Q96A35 216 aaKnown RBP7.97□□□□□ -1.13
TMEM39A-201ENST00000319172 PNRC2Q9NPJ4 139 aaKnown RBP7.97□□□□□ -1.13
TMEM39A-201ENST00000319172 RCL1Q9Y2P8 373 aaKnown RBP7.97□□□□□ -1.13
TMEM39A-201ENST00000319172 TMEM210A6NLX4 147 aa7.97□□□□□ -1.13
TMEM39A-201ENST00000319172 E5RGE8 158 aa7.97□□□□□ -1.13
TMEM39A-201ENST00000319172 WNT9BO14905 357 aa7.97□□□□□ -1.13
TMEM39A-201ENST00000319172 FCGR3BO75015 233 aa7.97□□□□□ -1.13
TMEM39A-201ENST00000319172 CRYGSP22914 178 aa7.97□□□□□ -1.13
TMEM39A-201ENST00000319172 COL10A1Q03692 680 aa7.97□□□□□ -1.13
TMEM39A-201ENST00000319172 NRN1LQ496H8 165 aa7.97□□□□□ -1.13
TMEM39A-201ENST00000319172 ZNF600Q6ZNG1 722 aa7.97□□□□□ -1.13
TMEM39A-201ENST00000319172 RNF141Q8WVD5 230 aa7.97□□□□□ -1.13
TMEM39A-201ENST00000319172 PBDC1Q9BVG4 233 aa7.97□□□□□ -1.13
TMEM39A-201ENST00000319172 NSG2Q9Y328 171 aa7.97□□□□□ -1.13
TMEM39A-201ENST00000319172 TIMM8BQ9Y5J9 83 aaPredicted RBP7.97□□□□□ -1.13
TMEM39A-201ENST00000319172 PLCE1Q9P212 2302 aa7.97□□□□□ -1.13
TMEM39A-201ENST00000319172 C10orf142B7Z368 130 aa7.96□□□□□ -1.13
TMEM39A-201ENST00000319172 CHATP28329 748 aa7.96□□□□□ -1.13
TMEM39A-201ENST00000319172 PRDX2P32119 198 aa7.96□□□□□ -1.13
TMEM39A-201ENST00000319172 MPV17P39210 176 aa7.96□□□□□ -1.13
TMEM39A-201ENST00000319172 HLA-DRB3P79483 266 aa7.96□□□□□ -1.13
TMEM39A-201ENST00000319172 DHODHQ02127 395 aa7.96□□□□□ -1.13
TMEM39A-201ENST00000319172 BAXQ07812 192 aa7.96□□□□□ -1.13
TMEM39A-201ENST00000319172 ZNF154Q13106 437 aa7.96□□□□□ -1.13
TMEM39A-201ENST00000319172 CLEC9AQ6UXN8 241 aa7.96□□□□□ -1.13
TMEM39A-201ENST00000319172 PAQR4Q8N4S7 273 aaPredicted RBP7.96□□□□□ -1.13
TMEM39A-201ENST00000319172 WBP1Q96G27 269 aa7.96□□□□□ -1.13
TMEM39A-201ENST00000319172 CNTNAP3BQ96NU0 1288 aa7.96□□□□□ -1.13
TMEM39A-201ENST00000319172 ZDHHC11Q9H8X9 412 aa7.96□□□□□ -1.13
TMEM39A-201ENST00000319172 PRR14LQ5THK1 2151 aa7.96□□□□□ -1.13
TMEM39A-201ENST00000319172 PCP4L1A6NKN8 68 aa7.96□□□□□ -1.13
TMEM39A-201ENST00000319172 SS18L1O75177 396 aaPredicted RBP7.96□□□□□ -1.13
TMEM39A-201ENST00000319172 LPAR6P43657 344 aa7.96□□□□□ -1.13
TMEM39A-201ENST00000319172 TAGLNQ01995 201 aaKnown RBP7.96□□□□□ -1.13
TMEM39A-201ENST00000319172 ZNF266Q14584 549 aa7.96□□□□□ -1.13
TMEM39A-201ENST00000319172 HIST3H3Q16695 136 aa7.96□□□□□ -1.13
TMEM39A-201ENST00000319172 VAX1Q5SQQ9 334 aa7.96□□□□□ -1.13
TMEM39A-201ENST00000319172 LYZL2Q7Z4W2 148 aa7.96□□□□□ -1.13
TMEM39A-201ENST00000319172 BAP18Q8IXM2 172 aa7.96□□□□□ -1.13
TMEM39A-201ENST00000319172 KCNRGQ8N5I3 272 aa7.96□□□□□ -1.13
TMEM39A-201ENST00000319172 SLC35G3Q8N808 338 aa7.96□□□□□ -1.13
TMEM39A-201ENST00000319172 LINC01560Q8TB33 94 aa7.96□□□□□ -1.13
TMEM39A-201ENST00000319172 OR5P3Q8WZ94 311 aa7.96□□□□□ -1.13
TMEM39A-201ENST00000319172 ST8SIA2Q92186 375 aa7.96□□□□□ -1.13
TMEM39A-201ENST00000319172 SOSTQ9BQB4 213 aa7.96□□□□□ -1.13
TMEM39A-201ENST00000319172 MYOZ1Q9NP98 299 aaPredicted RBP7.96□□□□□ -1.13
TMEM39A-201ENST00000319172 SPTBN4Q9H254 2564 aa7.96□□□□□ -1.14
TMEM39A-201ENST00000319172 KCNAB3O43448 404 aa7.96□□□□□ -1.14
TMEM39A-201ENST00000319172 IL18BPO95998 194 aa7.96□□□□□ -1.14
TMEM39A-201ENST00000319172 OR4A8P0C604 315 aa7.96□□□□□ -1.14
TMEM39A-201ENST00000319172 CTRB1P17538 263 aa7.96□□□□□ -1.14
TMEM39A-201ENST00000319172 KITLGP21583 273 aa7.96□□□□□ -1.14
TMEM39A-201ENST00000319172 PPP1CCP36873 323 aaKnown RBP7.96□□□□□ -1.14
TMEM39A-201ENST00000319172 RPL11P62913 178 aaKnown RBP7.96□□□□□ -1.14
TMEM39A-201ENST00000319172 SURF2Q15527 256 aaPredicted RBP7.96□□□□□ -1.14
TMEM39A-201ENST00000319172 CTRB2Q6GPI1 263 aa7.96□□□□□ -1.14
TMEM39A-201ENST00000319172 OR1S2Q8NGQ3 325 aa7.96□□□□□ -1.14
TMEM39A-201ENST00000319172 MITD1Q8WV92 249 aa7.96□□□□□ -1.14
TMEM39A-201ENST00000319172 SLC25A28Q96A46 364 aa7.96□□□□□ -1.14
TMEM39A-201ENST00000319172 UBTD1Q9HAC8 227 aa7.96□□□□□ -1.14
TMEM39A-201ENST00000319172 WIPI2Q9Y4P8 454 aa7.96□□□□□ -1.14
TMEM39A-201ENST00000319172 DENND4AQ7Z401 1863 aa7.96□□□□□ -1.14
TMEM39A-201ENST00000319172 A0A1W2PPE3 182 aa7.96□□□□□ -1.14
TMEM39A-201ENST00000319172 PRSS47A8MTI9 375 aa7.96□□□□□ -1.14
TMEM39A-201ENST00000319172 IFNA1P01562 189 aa7.96□□□□□ -1.14
TMEM39A-201ENST00000319172 CRHP06850 196 aa7.96□□□□□ -1.14
TMEM39A-201ENST00000319172 NTF4P34130 210 aa7.96□□□□□ -1.14
TMEM39A-201ENST00000319172 KIR2DL2P43627 348 aaPredicted RBP7.96□□□□□ -1.14
TMEM39A-201ENST00000319172 PPT1P50897 306 aa7.96□□□□□ -1.14
TMEM39A-201ENST00000319172 ELLP55199 621 aaPredicted RBP7.96□□□□□ -1.14
TMEM39A-201ENST00000319172 GNB1P62873 340 aa7.96□□□□□ -1.14
TMEM39A-201ENST00000319172 TIMM23BQ5SRD1 257 aa7.96□□□□□ -1.14
TMEM39A-201ENST00000319172 FAHD2BQ6P2I3 314 aaPredicted RBP7.96□□□□□ -1.14
TMEM39A-201ENST00000319172 TEX261Q6UWH6 196 aa7.96□□□□□ -1.14
TMEM39A-201ENST00000319172 OR2G3Q8NGZ4 309 aa7.96□□□□□ -1.14
TMEM39A-201ENST00000319172 HPSE2Q8WWQ2 592 aa7.96□□□□□ -1.14
TMEM39A-201ENST00000319172 FAHD2AQ96GK7 314 aa7.96□□□□□ -1.14
TMEM39A-201ENST00000319172 TAAR6Q96RI8 345 aa7.96□□□□□ -1.14
TMEM39A-201ENST00000319172 CCL13Q99616 98 aa7.96□□□□□ -1.14
TMEM39A-201ENST00000319172 CACNG5Q9UF02 275 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms