RNA–Protein interactions for RNA: ENST00000312196.8

MSL3-201, Transcript of MSL complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSL3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-201ENST00000312196 ST6GALNAC6Q969X2 333 aa6.71□□□□□ -1.34
MSL3-201ENST00000312196 RPEQ96AT9 228 aa6.71□□□□□ -1.34
MSL3-201ENST00000312196 GON7Q9BXV9 100 aa6.71□□□□□ -1.34
MSL3-201ENST00000312196 GFOD1Q9NXC2 390 aa6.71□□□□□ -1.34
MSL3-201ENST00000312196 NKX1-2Q9UD57 310 aaPredicted RBP6.71□□□□□ -1.34
MSL3-201ENST00000312196 KIF25Q9UIL4 384 aa6.71□□□□□ -1.34
MSL3-201ENST00000312196 G3V4G9 280 aa6.7□□□□□ -1.34
MSL3-201ENST00000312196 IGHG2P01859 326 aa6.7□□□□□ -1.34
MSL3-201ENST00000312196 MYCNOSP40205 109 aa6.7□□□□□ -1.34
MSL3-201ENST00000312196 C1orf100Q5SVJ3 147 aa6.7□□□□□ -1.34
MSL3-201ENST00000312196 RNF144BQ7Z419 303 aa6.7□□□□□ -1.34
MSL3-201ENST00000312196 TGIF2LXQ8IUE1 241 aa6.7□□□□□ -1.34
MSL3-201ENST00000312196 MS4A15Q8N5U1 240 aa6.7□□□□□ -1.34
MSL3-201ENST00000312196 C5orf56Q8N8D9 126 aa6.7□□□□□ -1.34
MSL3-201ENST00000312196 ZNF439Q8NDP4 499 aa6.7□□□□□ -1.34
MSL3-201ENST00000312196 OR5AU1Q8NGC0 362 aa6.7□□□□□ -1.34
MSL3-201ENST00000312196 PLPPR1Q8TBJ4 325 aa6.7□□□□□ -1.34
MSL3-201ENST00000312196 TMEM106AQ96A25 262 aa6.7□□□□□ -1.34
MSL3-201ENST00000312196 RFT1Q96AA3 541 aa6.7□□□□□ -1.34
MSL3-201ENST00000312196 GPER1Q99527 375 aa6.7□□□□□ -1.34
MSL3-201ENST00000312196 GHITMQ9H3K2 345 aa6.7□□□□□ -1.34
MSL3-201ENST00000312196 ST3GAL6Q9Y274 331 aa6.7□□□□□ -1.34
MSL3-201ENST00000312196 HILPDAQ9Y5L2 63 aa6.7□□□□□ -1.34
MSL3-201ENST00000312196 MEIKINA0A087WXM9 373 aa6.7□□□□□ -1.34
MSL3-201ENST00000312196 TRBV6-6A0A0A6YYG2 114 aa6.7□□□□□ -1.34
MSL3-201ENST00000312196 HTR3BO95264 441 aa6.7□□□□□ -1.34
MSL3-201ENST00000312196 CSTBP04080 98 aaKnown RBP6.7□□□□□ -1.34
MSL3-201ENST00000312196 HTD2P86397 168 aa6.7□□□□□ -1.34
MSL3-201ENST00000312196 EGFEM1PQ0D2K5 195 aa6.7□□□□□ -1.34
MSL3-201ENST00000312196 TRAM1Q15629 374 aa6.7□□□□□ -1.34
MSL3-201ENST00000312196 VAX1Q5SQQ9 334 aa6.7□□□□□ -1.34
MSL3-201ENST00000312196 NANOGP1Q8N7R0 232 aa6.7□□□□□ -1.34
MSL3-201ENST00000312196 OR51D1Q8NGF3 324 aa6.7□□□□□ -1.34
MSL3-201ENST00000312196 MRAPQ8TCY5 172 aa6.7□□□□□ -1.34
MSL3-201ENST00000312196 GHSRQ92847 366 aa6.7□□□□□ -1.34
MSL3-201ENST00000312196 S100A13Q99584 98 aa6.7□□□□□ -1.34
MSL3-201ENST00000312196 CITED2Q99967 270 aaPredicted RBP6.7□□□□□ -1.34
MSL3-201ENST00000312196 MBNL3Q9NUK0 354 aaKnown RBP6.7□□□□□ -1.34
MSL3-201ENST00000312196 LIN7CQ9NUP9 197 aaKnown RBP6.7□□□□□ -1.34
MSL3-201ENST00000312196 AURKAIP1Q9NWT8 199 aaPredicted RBP6.7□□□□□ -1.34
MSL3-201ENST00000312196 ING4Q9UNL4 249 aa6.7□□□□□ -1.34
MSL3-201ENST00000312196 SIRT4Q9Y6E7 314 aaPredicted RBP6.7□□□□□ -1.34
MSL3-201ENST00000312196 TRIM64CA6NLI5 447 aa6.69□□□□□ -1.34
MSL3-201ENST00000312196 NAT1P18440 290 aa6.69□□□□□ -1.34
MSL3-201ENST00000312196 OR3A4PP47883 348 aa6.69□□□□□ -1.34
MSL3-201ENST00000312196 WNT4P56705 351 aa6.69□□□□□ -1.34
MSL3-201ENST00000312196 BLCAPP62952 87 aa6.69□□□□□ -1.34
MSL3-201ENST00000312196 C16orf54Q6UWD8 224 aa6.69□□□□□ -1.34
MSL3-201ENST00000312196 SLC25A48Q6ZT89 311 aaKnown RBP6.69□□□□□ -1.34
MSL3-201ENST00000312196 TMEM219Q86XT9 240 aa6.69□□□□□ -1.34
MSL3-201ENST00000312196 C8orf59Q8N0T1 100 aaPredicted RBP6.69□□□□□ -1.34
MSL3-201ENST00000312196 BATF2Q8N1L9 274 aa6.69□□□□□ -1.34
MSL3-201ENST00000312196 TPRX1Q8N7U7 411 aa6.69□□□□□ -1.34
MSL3-201ENST00000312196 OR2T10Q8NGZ9 312 aa6.69□□□□□ -1.34
MSL3-201ENST00000312196 MRGPRDQ8TDS7 321 aa6.69□□□□□ -1.34
MSL3-201ENST00000312196 CYGBQ8WWM9 190 aa6.69□□□□□ -1.34
MSL3-201ENST00000312196 DERL3Q96Q80 235 aa6.69□□□□□ -1.34
MSL3-201ENST00000312196 PSG11Q9UQ72 335 aa6.69□□□□□ -1.34
MSL3-201ENST00000312196 MCRIP1C9JLW8 97 aa6.68□□□□□ -1.34
MSL3-201ENST00000312196 CLIC3O95833 236 aa6.68□□□□□ -1.34
MSL3-201ENST00000312196 NHLRC4P0CG21 123 aaPredicted RBP6.68□□□□□ -1.34
MSL3-201ENST00000312196 RAB13P51153 203 aa6.68□□□□□ -1.34
MSL3-201ENST00000312196 GTF2A1P52655 376 aaPredicted RBP6.68□□□□□ -1.34
MSL3-201ENST00000312196 SLC35A2P78381 396 aa6.68□□□□□ -1.34
MSL3-201ENST00000312196 SLC35B1P78383 322 aa6.68□□□□□ -1.34
MSL3-201ENST00000312196 IRF3Q14653 427 aa6.68□□□□□ -1.34
MSL3-201ENST00000312196 ATXN7L3Q14CW9 347 aaPredicted RBP6.68□□□□□ -1.34
MSL3-201ENST00000312196 ZNF880Q6PDB4 577 aa6.68□□□□□ -1.34
MSL3-201ENST00000312196 CENPVQ7Z7K6 275 aaPredicted RBP6.68□□□□□ -1.34
MSL3-201ENST00000312196 Q96M66 194 aa6.68□□□□□ -1.34
MSL3-201ENST00000312196 NKX3-1Q99801 234 aaPredicted RBP6.68□□□□□ -1.34
MSL3-201ENST00000312196 TM2D1Q9BX74 207 aa6.68□□□□□ -1.34
MSL3-201ENST00000312196 VCXQ9H320 206 aa6.68□□□□□ -1.34
MSL3-201ENST00000312196 RIMS4Q9H426 269 aaPredicted RBP6.68□□□□□ -1.34
MSL3-201ENST00000312196 JPT1Q9UK76 154 aa6.68□□□□□ -1.34
MSL3-201ENST00000312196 MGAT4AQ9UM21 535 aa6.68□□□□□ -1.34
MSL3-201ENST00000312196 MRPS28Q9Y2Q9 187 aaKnown RBP6.68□□□□□ -1.34
MSL3-201ENST00000312196 RRP15Q9Y3B9 282 aaKnown RBP6.68□□□□□ -1.34
MSL3-201ENST00000312196 TCRBV4S1A1TA0A5B7 111 aa6.68□□□□□ -1.34
MSL3-201ENST00000312196 ARPC1BO15143 372 aaKnown RBP6.68□□□□□ -1.34
MSL3-201ENST00000312196 SPINT2O43291 252 aa6.68□□□□□ -1.34
MSL3-201ENST00000312196 SNRNP70P08621 437 aaKnown RBP6.68□□□□□ -1.34
MSL3-201ENST00000312196 FUT3P21217 361 aa6.68□□□□□ -1.34
MSL3-201ENST00000312196 PSMA1P25786 263 aaKnown RBP6.68□□□□□ -1.34
MSL3-201ENST00000312196 CRIP2P52943 208 aaPredicted RBP6.68□□□□□ -1.34
MSL3-201ENST00000312196 RPL23AP62750 156 aaKnown RBP6.68□□□□□ -1.34
MSL3-201ENST00000312196 ST3GAL4Q11206 333 aa6.68□□□□□ -1.34
MSL3-201ENST00000312196 FOXE3Q13461 319 aa6.68□□□□□ -1.34
MSL3-201ENST00000312196 TCTEX1D4Q5JR98 221 aa6.68□□□□□ -1.34
MSL3-201ENST00000312196 LAIR2Q6ISS4 152 aa6.68□□□□□ -1.34
MSL3-201ENST00000312196 MOB1BQ7L9L4 216 aa6.68□□□□□ -1.34
MSL3-201ENST00000312196 OR2W3Q7Z3T1 314 aa6.68□□□□□ -1.34
MSL3-201ENST00000312196 SATL1Q86VE3 508 aa6.68□□□□□ -1.34
MSL3-201ENST00000312196 LILRB2Q8N423 598 aa6.68□□□□□ -1.34
MSL3-201ENST00000312196 OR5D18Q8NGL1 313 aa6.68□□□□□ -1.34
MSL3-201ENST00000312196 TFAP2CQ92754 450 aa6.68□□□□□ -1.34
MSL3-201ENST00000312196 MYDGFQ969H8 173 aa6.68□□□□□ -1.34
MSL3-201ENST00000312196 PHF21AQ96BD5 680 aa6.68□□□□□ -1.34
MSL3-201ENST00000312196 SPACA5Q96QH8 159 aa6.68□□□□□ -1.34
MSL3-201ENST00000312196 AASSQ9UDR5 926 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 231.1 ms