RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 RPEQ96AT9 228 aa21.21■□□□□ 0.99
CDKN2A-201ENST00000304494 DUSP21Q9H596 190 aa21.21■□□□□ 0.99
CDKN2A-201ENST00000304494 SERTAD4Q9NUC0 356 aa21.21■□□□□ 0.99
CDKN2A-201ENST00000304494 RCC2Q9P258 522 aaKnown RBP21.21■□□□□ 0.99
CDKN2A-201ENST00000304494 PSG11Q9UQ72 335 aa21.21■□□□□ 0.99
CDKN2A-201ENST00000304494 CMYA5Q8N3K9 4069 aa21.2■□□□□ 0.98
CDKN2A-201ENST00000304494 TRAV39A0A0B4J263 110 aa21.2■□□□□ 0.98
CDKN2A-201ENST00000304494 CRTAPO75718 401 aaPredicted RBP21.2■□□□□ 0.98
CDKN2A-201ENST00000304494 MGMTP16455 207 aa21.2■□□□□ 0.98
CDKN2A-201ENST00000304494 HABP2Q14520 560 aaPredicted RBP21.2■□□□□ 0.98
CDKN2A-201ENST00000304494 INSL4Q14641 139 aa21.2■□□□□ 0.98
CDKN2A-201ENST00000304494 CFHR4Q92496 578 aa21.2■□□□□ 0.98
CDKN2A-201ENST00000304494 PHYHIPQ92561 330 aa21.2■□□□□ 0.98
CDKN2A-201ENST00000304494 SGCDQ92629 289 aa21.2■□□□□ 0.98
CDKN2A-201ENST00000304494 UFD1Q92890 307 aa21.2■□□□□ 0.98
CDKN2A-201ENST00000304494 LEAP2Q969E1 77 aa21.2■□□□□ 0.98
CDKN2A-201ENST00000304494 TOMM40LQ969M1 308 aa21.2■□□□□ 0.98
CDKN2A-201ENST00000304494 SELENOIQ9C0D9 397 aa21.2■□□□□ 0.98
CDKN2A-201ENST00000304494 AIPO00170 330 aa21.19■□□□□ 0.98
CDKN2A-201ENST00000304494 RGS10O43665 173 aa21.19■□□□□ 0.98
CDKN2A-201ENST00000304494 ORC5O43913 435 aa21.19■□□□□ 0.98
CDKN2A-201ENST00000304494 PEX14O75381 377 aa21.19■□□□□ 0.98
CDKN2A-201ENST00000304494 CD24P25063 80 aa21.19■□□□□ 0.98
CDKN2A-201ENST00000304494 MADCAM1Q13477 382 aa21.19■□□□□ 0.98
CDKN2A-201ENST00000304494 RAB12Q6IQ22 244 aa21.19■□□□□ 0.98
CDKN2A-201ENST00000304494 CST11Q9H112 138 aa21.19■□□□□ 0.98
CDKN2A-201ENST00000304494 BANF2Q9H503 90 aa21.19■□□□□ 0.98
CDKN2A-201ENST00000304494 MT-ND4P03905 459 aa21.18■□□□□ 0.98
CDKN2A-201ENST00000304494 CSF1P09603 554 aa21.18■□□□□ 0.98
CDKN2A-201ENST00000304494 UBBP0CG47 229 aa21.18■□□□□ 0.98
CDKN2A-201ENST00000304494 GNG10P50151 68 aa21.18■□□□□ 0.98
CDKN2A-201ENST00000304494 BLCAPP62952 87 aa21.18■□□□□ 0.98
CDKN2A-201ENST00000304494 RBM48Q5RL73 367 aaKnown RBP21.18■□□□□ 0.98
CDKN2A-201ENST00000304494 GLT8D1Q68CQ7 371 aa21.18■□□□□ 0.98
CDKN2A-201ENST00000304494 IZUMO2Q6UXV1 221 aa21.18■□□□□ 0.98
CDKN2A-201ENST00000304494 CEACAM19Q7Z692 300 aa21.18■□□□□ 0.98
CDKN2A-201ENST00000304494 TMEM104Q8NE00 496 aa21.18■□□□□ 0.98
CDKN2A-201ENST00000304494 CCDC107Q8WV48 283 aa21.18■□□□□ 0.98
CDKN2A-201ENST00000304494 ARL11Q969Q4 196 aa21.18■□□□□ 0.98
CDKN2A-201ENST00000304494 RAB9BQ9NP90 201 aa21.18■□□□□ 0.98
CDKN2A-201ENST00000304494 ETAA1Q9NY74 926 aa21.18■□□□□ 0.98
CDKN2A-201ENST00000304494 PEX16Q9Y5Y5 336 aa21.18■□□□□ 0.98
CDKN2A-201ENST00000304494 MEGF8Q7Z7M0 2845 aa21.18■□□□□ 0.98
CDKN2A-201ENST00000304494 OR2F2O95006 317 aa21.17■□□□□ 0.98
CDKN2A-201ENST00000304494 TSPAN15O95858 294 aa21.17■□□□□ 0.98
CDKN2A-201ENST00000304494 IGHV3-7P01780 117 aa21.17■□□□□ 0.98
CDKN2A-201ENST00000304494 GLAP06280 429 aa21.17■□□□□ 0.98
CDKN2A-201ENST00000304494 FAM106CPP0CH98 169 aa21.17■□□□□ 0.98
CDKN2A-201ENST00000304494 HSD17B12Q53GQ0 312 aa21.17■□□□□ 0.98
CDKN2A-201ENST00000304494 FAM27D1Q5T7N8 215 aa21.17■□□□□ 0.98
CDKN2A-201ENST00000304494 LIPKQ5VXJ0 399 aa21.17■□□□□ 0.98
CDKN2A-201ENST00000304494 OR52M1Q8NGK5 317 aa21.17■□□□□ 0.98
CDKN2A-201ENST00000304494 OR10X1Q8NGY0 326 aa21.17■□□□□ 0.98
CDKN2A-201ENST00000304494 Q96M66 194 aa21.17■□□□□ 0.98
CDKN2A-201ENST00000304494 RBM14Q96PK6 669 aaKnown RBP21.17■□□□□ 0.98
CDKN2A-201ENST00000304494 SLC25A33Q9BSK2 321 aa21.17■□□□□ 0.98
CDKN2A-201ENST00000304494 ISYNA1Q9NPH2 558 aa21.17■□□□□ 0.98
CDKN2A-201ENST00000304494 TRAPPC2LQ9UL33 140 aa21.17■□□□□ 0.98
CDKN2A-201ENST00000304494 C15orf65H3BRN8 121 aa21.16■□□□□ 0.98
CDKN2A-201ENST00000304494 CA11O75493 328 aa21.16■□□□□ 0.98
CDKN2A-201ENST00000304494 SC5DO75845 299 aa21.16■□□□□ 0.98
CDKN2A-201ENST00000304494 HSMCR30P0CW71 290 aa21.16■□□□□ 0.98
CDKN2A-201ENST00000304494 SRMP19623 302 aa21.16■□□□□ 0.98
CDKN2A-201ENST00000304494 FUT3P21217 361 aa21.16■□□□□ 0.98
CDKN2A-201ENST00000304494 CRHBPP24387 322 aa21.16■□□□□ 0.98
CDKN2A-201ENST00000304494 VDAC2P45880 294 aaPredicted RBP21.16■□□□□ 0.98
CDKN2A-201ENST00000304494 RAB7AP51149 207 aa21.16■□□□□ 0.98
CDKN2A-201ENST00000304494 GP2P55259 537 aaKnown RBP21.16■□□□□ 0.98
CDKN2A-201ENST00000304494 LRRTM1Q86UE6 522 aa21.16■□□□□ 0.98
CDKN2A-201ENST00000304494 C11orf44Q8N8P7 122 aa21.16■□□□□ 0.98
CDKN2A-201ENST00000304494 CCDC90BQ9GZT6 254 aa21.16■□□□□ 0.98
CDKN2A-201ENST00000304494 SDCBPO00560 298 aaPredicted RBP21.15■□□□□ 0.98
CDKN2A-201ENST00000304494 UCHL1P09936 223 aa21.15■□□□□ 0.98
CDKN2A-201ENST00000304494 TRAM1Q15629 374 aa21.15■□□□□ 0.98
CDKN2A-201ENST00000304494 C6orf183Q5T699 404 aa21.15■□□□□ 0.98
CDKN2A-201ENST00000304494 PRSS48Q7RTY5 328 aa21.15■□□□□ 0.98
CDKN2A-201ENST00000304494 WNT10AQ9GZT5 417 aa21.15■□□□□ 0.98
CDKN2A-201ENST00000304494 TET2Q6N021 2002 aaPredicted RBP21.14■□□□□ 0.98
CDKN2A-201ENST00000304494 M0QZK8 103 aa21.14■□□□□ 0.97
CDKN2A-201ENST00000304494 SPINT2O43291 252 aa21.14■□□□□ 0.97
CDKN2A-201ENST00000304494 FBXO24O75426 580 aa21.14■□□□□ 0.97
CDKN2A-201ENST00000304494 PSMA1P25786 263 aaKnown RBP21.14■□□□□ 0.97
CDKN2A-201ENST00000304494 TPBGQ13641 420 aa21.14■□□□□ 0.97
CDKN2A-201ENST00000304494 TMEM30BQ3MIR4 351 aa21.14■□□□□ 0.97
CDKN2A-201ENST00000304494 SYT6Q5T7P8 510 aaPredicted RBP21.14■□□□□ 0.97
CDKN2A-201ENST00000304494 TRAT1Q6PIZ9 186 aa21.14■□□□□ 0.97
CDKN2A-201ENST00000304494 Q6ZS46 218 aa21.14■□□□□ 0.97
CDKN2A-201ENST00000304494 THNSL2Q86YJ6 484 aa21.14■□□□□ 0.97
CDKN2A-201ENST00000304494 OR8H3Q8N146 312 aa21.14■□□□□ 0.97
CDKN2A-201ENST00000304494 GAPTQ8N292 157 aa21.14■□□□□ 0.97
CDKN2A-201ENST00000304494 C8orf31Q8N9H6 132 aa21.14■□□□□ 0.97
CDKN2A-201ENST00000304494 FAM110DQ8TAY7 271 aaPredicted RBP21.14■□□□□ 0.97
CDKN2A-201ENST00000304494 FAM46BQ96A09 425 aa21.14■□□□□ 0.97
CDKN2A-201ENST00000304494 VWFP04275 2813 aa21.14■□□□□ 0.97
CDKN2A-201ENST00000304494 PDCD6O75340 191 aa21.13■□□□□ 0.97
CDKN2A-201ENST00000304494 MLLT11Q13015 90 aaPredicted RBP21.13■□□□□ 0.97
CDKN2A-201ENST00000304494 C1orf100Q5SVJ3 147 aa21.13■□□□□ 0.97
CDKN2A-201ENST00000304494 TMEM203Q969S6 136 aa21.13■□□□□ 0.97
CDKN2A-201ENST00000304494 CNBD2Q96M20 576 aa21.13■□□□□ 0.97
CDKN2A-201ENST00000304494 GFOD1Q9NXC2 390 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms