RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 IL24Q13007 206 aa12.47□□□□□ -0.41
CDT1-201ENST00000301019 GRINAQ7Z429 371 aa12.47□□□□□ -0.41
CDT1-201ENST00000301019 D2HGDHQ8N465 521 aa12.47□□□□□ -0.41
CDT1-201ENST00000301019 PLEKHF2Q9H8W4 249 aa12.47□□□□□ -0.41
CDT1-201ENST00000301019 PRTFDC1Q9NRG1 225 aa12.47□□□□□ -0.41
CDT1-201ENST00000301019 MAP1LC3B2A6NCE7 125 aa12.47□□□□□ -0.41
CDT1-201ENST00000301019 NPIPA2E9PIF3 369 aa12.47□□□□□ -0.41
CDT1-201ENST00000301019 SERF1AO75920 110 aa12.47□□□□□ -0.41
CDT1-201ENST00000301019 AADACP22760 399 aa12.47□□□□□ -0.41
CDT1-201ENST00000301019 GALNSP34059 522 aa12.47□□□□□ -0.41
CDT1-201ENST00000301019 DRD3P35462 400 aa12.47□□□□□ -0.41
CDT1-201ENST00000301019 HERV-K104P61576 105 aa12.47□□□□□ -0.41
CDT1-201ENST00000301019 HSF1Q00613 529 aa12.47□□□□□ -0.41
CDT1-201ENST00000301019 TMEM183BQ1AE95 376 aa12.47□□□□□ -0.41
CDT1-201ENST00000301019 C1orf185Q5T7R7 199 aa12.47□□□□□ -0.41
CDT1-201ENST00000301019 RAB11FIP5Q9BXF6 653 aa12.47□□□□□ -0.41
CDT1-201ENST00000301019 MAP1LC3BQ9GZQ8 125 aa12.47□□□□□ -0.41
CDT1-201ENST00000301019 ZDHHC11Q9H8X9 412 aa12.47□□□□□ -0.41
CDT1-201ENST00000301019 TMED7-TICAM2A0A0A6YYA0 188 aa12.46□□□□□ -0.41
CDT1-201ENST00000301019 IFNA5P01569 189 aa12.46□□□□□ -0.41
CDT1-201ENST00000301019 IL3RAP26951 378 aa12.46□□□□□ -0.41
CDT1-201ENST00000301019 CFPP27918 469 aa12.46□□□□□ -0.41
CDT1-201ENST00000301019 OR2AE1Q8NHA4 323 aa12.46□□□□□ -0.41
CDT1-201ENST00000301019 SCGB1C1Q8TD33 95 aa12.46□□□□□ -0.41
CDT1-201ENST00000301019 MSI2Q96DH6 328 aaKnown RBP12.46□□□□□ -0.41
CDT1-201ENST00000301019 TECTBQ96PL2 329 aa12.46□□□□□ -0.41
CDT1-201ENST00000301019 DERL1Q9BUN8 251 aa12.46□□□□□ -0.41
CDT1-201ENST00000301019 PARLQ9H300 379 aa12.46□□□□□ -0.41
CDT1-201ENST00000301019 GPR35Q9HC97 309 aa12.46□□□□□ -0.41
CDT1-201ENST00000301019 TMEM106BQ9NUM4 274 aa12.46□□□□□ -0.41
CDT1-201ENST00000301019 CCKARP32238 428 aa12.46□□□□□ -0.42
CDT1-201ENST00000301019 ADMP35318 185 aa12.46□□□□□ -0.42
CDT1-201ENST00000301019 OR1D4P47884 311 aa12.46□□□□□ -0.42
CDT1-201ENST00000301019 HNRNPA3P51991 378 aaKnown RBP12.46□□□□□ -0.42
CDT1-201ENST00000301019 C1orf61Q13536 156 aa12.46□□□□□ -0.42
CDT1-201ENST00000301019 SPATA45Q537H7 98 aa12.46□□□□□ -0.42
CDT1-201ENST00000301019 EMC4Q5J8M3 183 aa12.46□□□□□ -0.42
CDT1-201ENST00000301019 DNASE2BQ8WZ79 361 aa12.46□□□□□ -0.42
CDT1-201ENST00000301019 RYDENQ9NUL5 291 aaKnown RBP12.46□□□□□ -0.42
CDT1-201ENST00000301019 TRAV36DV7A0A075B6V5 113 aa12.45□□□□□ -0.42
CDT1-201ENST00000301019 B4DEV8 164 aa12.45□□□□□ -0.42
CDT1-201ENST00000301019 APODP05090 189 aa12.45□□□□□ -0.42
CDT1-201ENST00000301019 GP1BBP13224 206 aa12.45□□□□□ -0.42
CDT1-201ENST00000301019 ZNF17P17021 662 aa12.45□□□□□ -0.42
CDT1-201ENST00000301019 EXT1Q16394 746 aa12.45□□□□□ -0.42
CDT1-201ENST00000301019 OR2M3Q8NG83 312 aa12.45□□□□□ -0.42
CDT1-201ENST00000301019 ZNF519Q8TB69 540 aa12.45□□□□□ -0.42
CDT1-201ENST00000301019 OR6C1Q96RD1 312 aa12.45□□□□□ -0.42
CDT1-201ENST00000301019 IGFLR1Q9H665 355 aa12.45□□□□□ -0.42
CDT1-201ENST00000301019 OR6C3Q9NZP0 311 aa12.45□□□□□ -0.42
CDT1-201ENST00000301019 KIAA1549LQ6ZVL6 1849 aa12.45□□□□□ -0.42
CDT1-201ENST00000301019 NCOA6Q14686 2063 aaPredicted RBP12.45□□□□□ -0.42
CDT1-201ENST00000301019 LOC105371242A0A075B767 164 aa12.45□□□□□ -0.42
CDT1-201ENST00000301019 NTF3P20783 257 aa12.45□□□□□ -0.42
CDT1-201ENST00000301019 ASPHD1Q5U4P2 390 aa12.45□□□□□ -0.42
CDT1-201ENST00000301019 ZDHHC23Q8IYP9 409 aa12.45□□□□□ -0.42
CDT1-201ENST00000301019 ZPBPQ9BS86 351 aa12.45□□□□□ -0.42
CDT1-201ENST00000301019 SLC39A9Q9NUM3 307 aa12.45□□□□□ -0.42
CDT1-201ENST00000301019 MTCH2Q9Y6C9 303 aa12.45□□□□□ -0.42
CDT1-201ENST00000301019 EDDM13A0A1B0GTR0 161 aa12.45□□□□□ -0.42
CDT1-201ENST00000301019 C1QTNF9P0C862 333 aa12.45□□□□□ -0.42
CDT1-201ENST00000301019 TLE3Q04726 772 aa12.45□□□□□ -0.42
CDT1-201ENST00000301019 ATP6V1FQ16864 119 aa12.45□□□□□ -0.42
CDT1-201ENST00000301019 ZNF468Q5VIY5 522 aaPredicted RBP12.45□□□□□ -0.42
CDT1-201ENST00000301019 KMT5CQ86Y97 462 aa12.45□□□□□ -0.42
CDT1-201ENST00000301019 ODF3L1Q8IXM7 274 aa12.45□□□□□ -0.42
CDT1-201ENST00000301019 ZNF596Q8TC21 504 aa12.45□□□□□ -0.42
CDT1-201ENST00000301019 TWSG1Q9GZX9 223 aa12.45□□□□□ -0.42
CDT1-201ENST00000301019 NKX6-3A6NJ46 265 aa12.44□□□□□ -0.42
CDT1-201ENST00000301019 CEACAM18A8MTB9 384 aa12.44□□□□□ -0.42
CDT1-201ENST00000301019 SIRPB1O00241 398 aa12.44□□□□□ -0.42
CDT1-201ENST00000301019 HRASP01112 189 aa12.44□□□□□ -0.42
CDT1-201ENST00000301019 HBE1P02100 147 aa12.44□□□□□ -0.42
CDT1-201ENST00000301019 SMIM10L1P0DMW3 83 aa12.44□□□□□ -0.42
CDT1-201ENST00000301019 CTSEP14091 401 aa12.44□□□□□ -0.42
CDT1-201ENST00000301019 ZXDAP98168 799 aa12.44□□□□□ -0.42
CDT1-201ENST00000301019 MRPL30Q8TCC3 161 aaKnown RBP12.44□□□□□ -0.42
CDT1-201ENST00000301019 OR1E3Q8WZA6 343 aa12.44□□□□□ -0.42
CDT1-201ENST00000301019 PSMF1Q92530 271 aa12.44□□□□□ -0.42
CDT1-201ENST00000301019 SMIM10Q96HG1 83 aa12.44□□□□□ -0.42
CDT1-201ENST00000301019 C3orf85A0A1B0GTC6 90 aa12.44□□□□□ -0.42
CDT1-201ENST00000301019 ODAMA1E959 279 aa12.44□□□□□ -0.42
CDT1-201ENST00000301019 GYPAP02724 150 aa12.44□□□□□ -0.42
CDT1-201ENST00000301019 ISG15P05161 165 aa12.44□□□□□ -0.42
CDT1-201ENST00000301019 MTCP1P56278 107 aa12.44□□□□□ -0.42
CDT1-201ENST00000301019 TFF2Q03403 129 aa12.44□□□□□ -0.42
CDT1-201ENST00000301019 PNRC1Q12796 327 aaPredicted RBP12.44□□□□□ -0.42
CDT1-201ENST00000301019 C2orf27AQ580R0 203 aa12.44□□□□□ -0.42
CDT1-201ENST00000301019 TPTE2P1Q5T6R2 138 aa12.44□□□□□ -0.42
CDT1-201ENST00000301019 LCN12Q6JVE5 192 aa12.44□□□□□ -0.42
CDT1-201ENST00000301019 FAM19A2Q8N3H0 131 aa12.44□□□□□ -0.42
CDT1-201ENST00000301019 ACY3Q96HD9 319 aa12.44□□□□□ -0.42
CDT1-201ENST00000301019 LOXL4Q96JB6 756 aa12.44□□□□□ -0.42
CDT1-201ENST00000301019 GAL3ST2Q9H3Q3 398 aa12.44□□□□□ -0.42
CDT1-201ENST00000301019 NAT8Q9UHE5 227 aa12.44□□□□□ -0.42
CDT1-201ENST00000301019 UBE2L5PA0A1B0GUS4 154 aa12.43□□□□□ -0.42
CDT1-201ENST00000301019 ETV2O00321 342 aaPredicted RBP12.43□□□□□ -0.42
CDT1-201ENST00000301019 PLPP3O14495 311 aa12.43□□□□□ -0.42
CDT1-201ENST00000301019 RAB29O14966 203 aa12.43□□□□□ -0.42
CDT1-201ENST00000301019 TNFSF13O75888 250 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms