RNA–Protein interactions for RNA: ENST00000299185.12

DEPDC4-201, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-201ENST00000299185 PTTG2Q9NZH5 202 aa5.34□□□□□ -1.55
DEPDC4-201ENST00000299185 ONECUT1Q9UBC0 465 aa5.34□□□□□ -1.55
DEPDC4-201ENST00000299185 GHRLQ9UBU3 117 aa5.34□□□□□ -1.55
DEPDC4-201ENST00000299185 CLN8Q9UBY8 286 aa5.34□□□□□ -1.55
DEPDC4-201ENST00000299185 HIVEP1P15822 2718 aa5.34□□□□□ -1.55
DEPDC4-201ENST00000299185 NAV3Q8IVL0 2385 aa5.33□□□□□ -1.56
DEPDC4-201ENST00000299185 IGHV2-70DA0A0C4DH43 119 aa5.33□□□□□ -1.56
DEPDC4-201ENST00000299185 A0A1W2PPE3 182 aa5.33□□□□□ -1.56
DEPDC4-201ENST00000299185 TMEM30CPA0ZSE6 113 aa5.33□□□□□ -1.56
DEPDC4-201ENST00000299185 MCRIP1C9JLW8 97 aa5.33□□□□□ -1.56
DEPDC4-201ENST00000299185 LANCL1O43813 399 aa5.33□□□□□ -1.56
DEPDC4-201ENST00000299185 APOA1P02647 267 aa5.33□□□□□ -1.56
DEPDC4-201ENST00000299185 CHRM2P08172 466 aa5.33□□□□□ -1.56
DEPDC4-201ENST00000299185 FCGR3AP08637 254 aa5.33□□□□□ -1.56
DEPDC4-201ENST00000299185 RCC1P18754 421 aaPredicted RBP5.33□□□□□ -1.56
DEPDC4-201ENST00000299185 FUT3P21217 361 aa5.33□□□□□ -1.56
DEPDC4-201ENST00000299185 PAX6P26367 422 aa5.33□□□□□ -1.56
DEPDC4-201ENST00000299185 DLX6P56179 175 aa5.33□□□□□ -1.56
DEPDC4-201ENST00000299185 DSCR9P59020 149 aa5.33□□□□□ -1.56
DEPDC4-201ENST00000299185 GNG2P59768 71 aa5.33□□□□□ -1.56
DEPDC4-201ENST00000299185 PAX2Q02962 417 aa5.33□□□□□ -1.56
DEPDC4-201ENST00000299185 LOXL1Q08397 574 aaPredicted RBP5.33□□□□□ -1.56
DEPDC4-201ENST00000299185 ARFRP1Q13795 201 aa5.33□□□□□ -1.56
DEPDC4-201ENST00000299185 GPR176Q14439 515 aa5.33□□□□□ -1.56
DEPDC4-201ENST00000299185 ZNF79Q15937 498 aa5.33□□□□□ -1.56
DEPDC4-201ENST00000299185 ZNF260Q3ZCT1 412 aa5.33□□□□□ -1.56
DEPDC4-201ENST00000299185 LRRC10Q5BKY1 277 aa5.33□□□□□ -1.56
DEPDC4-201ENST00000299185 ATPAF1Q5TC12 328 aaPredicted RBP5.33□□□□□ -1.56
DEPDC4-201ENST00000299185 RUSC1-AS1Q66K80 236 aa5.33□□□□□ -1.56
DEPDC4-201ENST00000299185 OR52W1Q6IF63 320 aa5.33□□□□□ -1.56
DEPDC4-201ENST00000299185 FAAP20Q6NZ36 180 aa5.33□□□□□ -1.56
DEPDC4-201ENST00000299185 MZT2AQ6P582 158 aa5.33□□□□□ -1.56
DEPDC4-201ENST00000299185 GDPD3Q7L5L3 318 aa5.33□□□□□ -1.56
DEPDC4-201ENST00000299185 NLRC3Q7RTR2 1065 aa5.33□□□□□ -1.56
DEPDC4-201ENST00000299185 TRAPPC6BQ86SZ2 158 aa5.33□□□□□ -1.56
DEPDC4-201ENST00000299185 CROCCP3Q8IVE0 287 aa5.33□□□□□ -1.56
DEPDC4-201ENST00000299185 PRR18Q8N4B5 295 aa5.33□□□□□ -1.56
DEPDC4-201ENST00000299185 ZNF561Q8N587 486 aa5.33□□□□□ -1.56
DEPDC4-201ENST00000299185 OR10V1Q8NGI7 309 aa5.33□□□□□ -1.56
DEPDC4-201ENST00000299185 OR52I2Q8NH67 350 aa5.33□□□□□ -1.56
DEPDC4-201ENST00000299185 RNF141Q8WVD5 230 aa5.33□□□□□ -1.56
DEPDC4-201ENST00000299185 ACOT12Q8WYK0 555 aa5.33□□□□□ -1.56
DEPDC4-201ENST00000299185 DACT3Q96B18 629 aaPredicted RBP5.33□□□□□ -1.56
DEPDC4-201ENST00000299185 RAB39BQ96DA2 213 aa5.33□□□□□ -1.56
DEPDC4-201ENST00000299185 DIRAS2Q96HU8 199 aa5.33□□□□□ -1.56
DEPDC4-201ENST00000299185 ABHD1Q96SE0 405 aa5.33□□□□□ -1.56
DEPDC4-201ENST00000299185 CMSS1Q9BQ75 279 aaKnown RBP5.33□□□□□ -1.56
DEPDC4-201ENST00000299185 NUDT16L1Q9BRJ7 211 aaKnown RBP5.33□□□□□ -1.56
DEPDC4-201ENST00000299185 MRI1Q9BV20 369 aa5.33□□□□□ -1.56
DEPDC4-201ENST00000299185 SUCNR1Q9BXA5 334 aa5.33□□□□□ -1.56
DEPDC4-201ENST00000299185 ABCG5Q9H222 651 aa5.33□□□□□ -1.56
DEPDC4-201ENST00000299185 AKIP1Q9NQ31 210 aa5.33□□□□□ -1.56
DEPDC4-201ENST00000299185 PLEKHJ1Q9NW61 149 aa5.33□□□□□ -1.56
DEPDC4-201ENST00000299185 OR1A1Q9P1Q5 309 aa5.33□□□□□ -1.56
DEPDC4-201ENST00000299185 KAAG1Q9UBP8 84 aa5.33□□□□□ -1.56
DEPDC4-201ENST00000299185 MIOXQ9UGB7 285 aa5.33□□□□□ -1.56
DEPDC4-201ENST00000299185 RPUSD1Q9UJJ7 312 aaKnown RBP5.33□□□□□ -1.56
DEPDC4-201ENST00000299185 DCHS2Q6V1P9 2916 aa5.33□□□□□ -1.56
DEPDC4-201ENST00000299185 MED13LQ71F56 2210 aa5.32□□□□□ -1.56
DEPDC4-201ENST00000299185 CCDC168Q8NDH2 2452 aa5.32□□□□□ -1.56
DEPDC4-201ENST00000299185 LOC105371242A0A075B767 164 aa5.32□□□□□ -1.56
DEPDC4-201ENST00000299185 IGKV1-6A0A0C4DH72 117 aa5.32□□□□□ -1.56
DEPDC4-201ENST00000299185 LINC00854A0A1B0GVQ3 168 aa5.32□□□□□ -1.56
DEPDC4-201ENST00000299185 FAM90A10PA6NDY2 464 aa5.32□□□□□ -1.56
DEPDC4-201ENST00000299185 FAM90A18PA6NE21 464 aa5.32□□□□□ -1.56
DEPDC4-201ENST00000299185 FAM90A16PA6NEW6 464 aa5.32□□□□□ -1.56
DEPDC4-201ENST00000299185 FAM90A20PA6NIJ5 464 aa5.32□□□□□ -1.56
DEPDC4-201ENST00000299185 FAM90A8PA6NJQ4 464 aa5.32□□□□□ -1.56
DEPDC4-201ENST00000299185 FAM90A7PA6NKC0 464 aa5.32□□□□□ -1.56
DEPDC4-201ENST00000299185 FAM90A22PA8MWA6 464 aa5.32□□□□□ -1.56
DEPDC4-201ENST00000299185 FAM90A12PA8MX19 464 aa5.32□□□□□ -1.56
DEPDC4-201ENST00000299185 FAM90A5PA8MXJ8 464 aa5.32□□□□□ -1.56
DEPDC4-201ENST00000299185 A8MXK9 166 aa5.32□□□□□ -1.56
DEPDC4-201ENST00000299185 FAM90A23PA8MXZ1 464 aa5.32□□□□□ -1.56
DEPDC4-201ENST00000299185 C12orf77C9JDV5 145 aa5.32□□□□□ -1.56
DEPDC4-201ENST00000299185 MGST3O14880 152 aa5.32□□□□□ -1.56
DEPDC4-201ENST00000299185 SLC31A2O15432 143 aa5.32□□□□□ -1.56
DEPDC4-201ENST00000299185 NAPSAO96009 420 aa5.32□□□□□ -1.56
DEPDC4-201ENST00000299185 HLA-DQB1P01920 261 aa5.32□□□□□ -1.56
DEPDC4-201ENST00000299185 MT-ND4P03905 459 aa5.32□□□□□ -1.56
DEPDC4-201ENST00000299185 MSMBP08118 114 aa5.32□□□□□ -1.56
DEPDC4-201ENST00000299185 FAM90A15PP0C7V4 464 aa5.32□□□□□ -1.56
DEPDC4-201ENST00000299185 FAM90A13PP0C7W8 464 aa5.32□□□□□ -1.56
DEPDC4-201ENST00000299185 FAM90A14PP0C7W9 464 aa5.32□□□□□ -1.56
DEPDC4-201ENST00000299185 FAM90A24PP0C7X0 464 aa5.32□□□□□ -1.56
DEPDC4-201ENST00000299185 LMO1P25800 156 aa5.32□□□□□ -1.56
DEPDC4-201ENST00000299185 GNG10P50151 68 aa5.32□□□□□ -1.56
DEPDC4-201ENST00000299185 ARF6P62330 175 aa5.32□□□□□ -1.56
DEPDC4-201ENST00000299185 RPL31P62899 125 aaKnown RBP5.32□□□□□ -1.56
DEPDC4-201ENST00000299185 HLA-DRB3P79483 266 aa5.32□□□□□ -1.56
DEPDC4-201ENST00000299185 IL18Q14116 193 aa5.32□□□□□ -1.56
DEPDC4-201ENST00000299185 HERPUD1Q15011 391 aa5.32□□□□□ -1.56
DEPDC4-201ENST00000299185 C17orf58Q2M2W7 97 aa5.32□□□□□ -1.56
DEPDC4-201ENST00000299185 TMEM200BQ69YZ2 307 aa5.32□□□□□ -1.56
DEPDC4-201ENST00000299185 PRSS57Q6UWY2 283 aa5.32□□□□□ -1.56
DEPDC4-201ENST00000299185 FAM131AQ6UXB0 335 aa5.32□□□□□ -1.56
DEPDC4-201ENST00000299185 ZNF497Q6ZNH5 498 aa5.32□□□□□ -1.56
DEPDC4-201ENST00000299185 LINC00299Q6ZSB3 139 aa5.32□□□□□ -1.56
DEPDC4-201ENST00000299185 LINC00596Q86U02 117 aa5.32□□□□□ -1.56
DEPDC4-201ENST00000299185 CCDC190Q86UF4 302 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms