RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 IL24Q13007 206 aa9.95□□□□□ -0.82
NPC1L1-201ENST00000289547 DMRTA1Q5VZB9 504 aa9.95□□□□□ -0.82
NPC1L1-201ENST00000289547 LHFPL2Q6ZUX7 228 aa9.95□□□□□ -0.82
NPC1L1-201ENST00000289547 SMDT1Q9H4I9 107 aa9.95□□□□□ -0.82
NPC1L1-201ENST00000289547 DCAF16Q9NXF7 216 aa9.95□□□□□ -0.82
NPC1L1-201ENST00000289547 KIAA1456Q9P272 454 aa9.95□□□□□ -0.82
NPC1L1-201ENST00000289547 CCDC88CQ9P219 2028 aa9.95□□□□□ -0.82
NPC1L1-201ENST00000289547 FAM186AA6NE01 2351 aa9.95□□□□□ -0.82
NPC1L1-201ENST00000289547 H0YL77 283 aa9.95□□□□□ -0.82
NPC1L1-201ENST00000289547 EDDM3BP56851 147 aa9.95□□□□□ -0.82
NPC1L1-201ENST00000289547 CFHR1Q03591 330 aa9.95□□□□□ -0.82
NPC1L1-201ENST00000289547 SHBQ15464 509 aa9.95□□□□□ -0.82
NPC1L1-201ENST00000289547 TMEM255AQ5JRV8 349 aa9.95□□□□□ -0.82
NPC1L1-201ENST00000289547 NUFIP2Q7Z417 695 aaKnown RBP9.95□□□□□ -0.82
NPC1L1-201ENST00000289547 FDCSPQ8NFU4 85 aa9.95□□□□□ -0.82
NPC1L1-201ENST00000289547 ABHD17AQ96GS6 310 aa9.95□□□□□ -0.82
NPC1L1-201ENST00000289547 GSX1Q9H4S2 264 aaPredicted RBP9.95□□□□□ -0.82
NPC1L1-201ENST00000289547 NLRC5Q86WI3 1866 aa9.95□□□□□ -0.82
NPC1L1-201ENST00000289547 SHISA3A0PJX4 238 aa9.95□□□□□ -0.82
NPC1L1-201ENST00000289547 TRGC1P0CF51 173 aa9.95□□□□□ -0.82
NPC1L1-201ENST00000289547 CD99P14209 185 aa9.95□□□□□ -0.82
NPC1L1-201ENST00000289547 ACAA2P42765 397 aaKnown RBP9.95□□□□□ -0.82
NPC1L1-201ENST00000289547 CNN1P51911 297 aaKnown RBP9.95□□□□□ -0.82
NPC1L1-201ENST00000289547 EWSR1Q01844 656 aaKnown RBP eCLIP9.95□□□□□ -0.82
NPC1L1-201ENST00000289547 ELOBQ15370 118 aa9.95□□□□□ -0.82
NPC1L1-201ENST00000289547 BHLHA15Q7RTS1 189 aaPredicted RBP9.95□□□□□ -0.82
NPC1L1-201ENST00000289547 NPEPL1Q8NDH3 523 aa9.95□□□□□ -0.82
NPC1L1-201ENST00000289547 ADPRHL1Q8NDY3 354 aa9.95□□□□□ -0.82
NPC1L1-201ENST00000289547 OR2M3Q8NG83 312 aa9.95□□□□□ -0.82
NPC1L1-201ENST00000289547 PP6455Q8WZ26 134 aa9.95□□□□□ -0.82
NPC1L1-201ENST00000289547 LPAR5Q9H1C0 372 aa9.95□□□□□ -0.82
NPC1L1-201ENST00000289547 CES1P1Q9UKY3 287 aa9.95□□□□□ -0.82
NPC1L1-201ENST00000289547 PLXNA4Q9HCM2 1894 aa9.95□□□□□ -0.82
NPC1L1-201ENST00000289547 ABCA7Q8IZY2 2146 aa9.94□□□□□ -0.82
NPC1L1-201ENST00000289547 DIRC3C9JPN6 131 aa9.94□□□□□ -0.82
NPC1L1-201ENST00000289547 CIDEAO60543 219 aa9.94□□□□□ -0.82
NPC1L1-201ENST00000289547 SMIM10L1P0DMW3 83 aa9.94□□□□□ -0.82
NPC1L1-201ENST00000289547 TCF15Q12870 199 aa9.94□□□□□ -0.82
NPC1L1-201ENST00000289547 KHDC3LQ587J8 217 aa9.94□□□□□ -0.82
NPC1L1-201ENST00000289547 LEMD1Q68G75 181 aa9.94□□□□□ -0.82
NPC1L1-201ENST00000289547 ETV3LQ6ZN32 361 aa9.94□□□□□ -0.82
NPC1L1-201ENST00000289547 TMEM52Q8NDY8 209 aa9.94□□□□□ -0.82
NPC1L1-201ENST00000289547 OR10G4Q8NGN3 311 aa9.94□□□□□ -0.82
NPC1L1-201ENST00000289547 OR10G9Q8NGN4 311 aa9.94□□□□□ -0.82
NPC1L1-201ENST00000289547 OR10G7Q8NGN6 311 aa9.94□□□□□ -0.82
NPC1L1-201ENST00000289547 SMIM10Q96HG1 83 aa9.94□□□□□ -0.82
NPC1L1-201ENST00000289547 SLX1AQ9BQ83 275 aa9.94□□□□□ -0.82
NPC1L1-201ENST00000289547 KCNE5Q9UJ90 142 aa9.94□□□□□ -0.82
NPC1L1-201ENST00000289547 CARHSP1Q9Y2V2 147 aaKnown RBP9.94□□□□□ -0.82
NPC1L1-201ENST00000289547 C5orf49A4QMS7 147 aa9.94□□□□□ -0.82
NPC1L1-201ENST00000289547 FUT3P21217 361 aa9.94□□□□□ -0.82
NPC1L1-201ENST00000289547 CDAP32320 146 aa9.94□□□□□ -0.82
NPC1L1-201ENST00000289547 NANOS3P60323 173 aaKnown RBP9.94□□□□□ -0.82
NPC1L1-201ENST00000289547 OR10G8Q8NGN5 311 aa9.94□□□□□ -0.82
NPC1L1-201ENST00000289547 KCNK7Q9Y2U2 307 aa9.94□□□□□ -0.82
NPC1L1-201ENST00000289547 WASHC3Q9Y3C0 194 aa9.94□□□□□ -0.82
NPC1L1-201ENST00000289547 THADAQ6YHU6 1953 aa9.94□□□□□ -0.82
NPC1L1-201ENST00000289547 DSPPQ9NZW4 1301 aa9.94□□□□□ -0.82
NPC1L1-201ENST00000289547 A0A1W2PR80 420 aa9.94□□□□□ -0.82
NPC1L1-201ENST00000289547 DBX1A6NMT0 343 aa9.94□□□□□ -0.82
NPC1L1-201ENST00000289547 ZNF207O43670 478 aaKnown RBP9.94□□□□□ -0.82
NPC1L1-201ENST00000289547 EPPINO95925 133 aa9.94□□□□□ -0.82
NPC1L1-201ENST00000289547 FAM87AP0C7U9 286 aa9.94□□□□□ -0.82
NPC1L1-201ENST00000289547 CT45A6P0DMU7 189 aa9.94□□□□□ -0.82
NPC1L1-201ENST00000289547 CT45A5P0DMU8 189 aa9.94□□□□□ -0.82
NPC1L1-201ENST00000289547 CT45A7P0DMV0 189 aa9.94□□□□□ -0.82
NPC1L1-201ENST00000289547 CHRNB4P30926 498 aa9.94□□□□□ -0.82
NPC1L1-201ENST00000289547 CT45A1Q5HYN5 189 aa9.94□□□□□ -0.82
NPC1L1-201ENST00000289547 C17orf82Q86X59 251 aaPredicted RBP9.94□□□□□ -0.82
NPC1L1-201ENST00000289547 OR5AS1Q8N127 324 aa9.94□□□□□ -0.82
NPC1L1-201ENST00000289547 CT45A3Q8NHU0 189 aa9.94□□□□□ -0.82
NPC1L1-201ENST00000289547 ZNRF4Q8WWF5 429 aa9.94□□□□□ -0.82
NPC1L1-201ENST00000289547 TSPAN32Q96QS1 320 aa9.94□□□□□ -0.82
NPC1L1-201ENST00000289547 ZNF732B4DXR9 585 aa9.94□□□□□ -0.82
NPC1L1-201ENST00000289547 GAPDHP04406 335 aaKnown RBP9.94□□□□□ -0.82
NPC1L1-201ENST00000289547 THBS4P35443 961 aa9.94□□□□□ -0.82
NPC1L1-201ENST00000289547 HINT1P49773 126 aaPredicted RBP9.94□□□□□ -0.82
NPC1L1-201ENST00000289547 EDDM3AQ14507 147 aa9.94□□□□□ -0.82
NPC1L1-201ENST00000289547 LYZL2Q7Z4W2 148 aa9.94□□□□□ -0.82
NPC1L1-201ENST00000289547 TMEM251Q8N6I4 163 aa9.94□□□□□ -0.82
NPC1L1-201ENST00000289547 MOGAT1Q96PD6 335 aa9.94□□□□□ -0.82
NPC1L1-201ENST00000289547 ALKBH3Q96Q83 286 aaPredicted RBP9.94□□□□□ -0.82
NPC1L1-201ENST00000289547 AURKAIP1Q9NWT8 199 aaPredicted RBP9.94□□□□□ -0.82
NPC1L1-201ENST00000289547 CACNA1DQ01668 2161 aa9.94□□□□□ -0.82
NPC1L1-201ENST00000289547 SPINT2O43291 252 aa9.93□□□□□ -0.82
NPC1L1-201ENST00000289547 B4GALT1P15291 398 aa9.93□□□□□ -0.82
NPC1L1-201ENST00000289547 CTLA4P16410 223 aa9.93□□□□□ -0.82
NPC1L1-201ENST00000289547 FAM3BP58499 235 aaPredicted RBP9.93□□□□□ -0.82
NPC1L1-201ENST00000289547 MYPOPQ86VE0 399 aaPredicted RBP9.93□□□□□ -0.82
NPC1L1-201ENST00000289547 ZNF441Q8N8Z8 693 aa9.93□□□□□ -0.82
NPC1L1-201ENST00000289547 HSPB9Q9BQS6 159 aa9.93□□□□□ -0.82
NPC1L1-201ENST00000289547 CHST1O43916 411 aa9.93□□□□□ -0.82
NPC1L1-201ENST00000289547 ZNF205O95201 554 aa9.93□□□□□ -0.82
NPC1L1-201ENST00000289547 MBPP02686 304 aaPredicted RBP9.93□□□□□ -0.82
NPC1L1-201ENST00000289547 ZBTB25P24278 435 aa9.93□□□□□ -0.82
NPC1L1-201ENST00000289547 LIAT1Q6ZQX7 453 aa9.93□□□□□ -0.82
NPC1L1-201ENST00000289547 MRGPRGQ86SM5 289 aa9.93□□□□□ -0.82
NPC1L1-201ENST00000289547 RFLNBQ8N5W9 214 aa9.93□□□□□ -0.82
NPC1L1-201ENST00000289547 CACNG5Q9UF02 275 aa9.93□□□□□ -0.82
NPC1L1-201ENST00000289547 ZMIZ1Q9ULJ6 1067 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms