RNA–Protein interactions for RNA: ENST00000273179.9

CTDSPL-201, Transcript of CTD small phosphatase like, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-201ENST00000273179 GCM1Q9NP62 436 aa7.76□□□□□ -1.17
CTDSPL-201ENST00000273179 ZNF256Q9Y2P7 627 aaPredicted RBP7.76□□□□□ -1.17
CTDSPL-201ENST00000273179 ATP6V0CP27449 155 aa7.76□□□□□ -1.17
CTDSPL-201ENST00000273179 OTPQ5XKR4 325 aa7.76□□□□□ -1.17
CTDSPL-201ENST00000273179 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.76□□□□□ -1.17
CTDSPL-201ENST00000273179 PTGR2Q8N8N7 351 aaPredicted RBP7.76□□□□□ -1.17
CTDSPL-201ENST00000273179 PPCDCQ96CD2 204 aa7.76□□□□□ -1.17
CTDSPL-201ENST00000273179 PGLYRP2Q96PD5 576 aa7.76□□□□□ -1.17
CTDSPL-201ENST00000273179 SIGLEC12Q96PQ1 595 aa7.76□□□□□ -1.17
CTDSPL-201ENST00000273179 RASL11BQ9BPW5 248 aa7.76□□□□□ -1.17
CTDSPL-201ENST00000273179 EXOSC3Q9NQT5 275 aaKnown RBP7.76□□□□□ -1.17
CTDSPL-201ENST00000273179 A0A1B0GWB2 263 aa7.76□□□□□ -1.17
CTDSPL-201ENST00000273179 SERINC4A6NH21 518 aa7.76□□□□□ -1.17
CTDSPL-201ENST00000273179 TNFRSF10CO14798 259 aa7.76□□□□□ -1.17
CTDSPL-201ENST00000273179 REG1AP05451 166 aa7.76□□□□□ -1.17
CTDSPL-201ENST00000273179 RPL7P18124 248 aaKnown RBP7.76□□□□□ -1.17
CTDSPL-201ENST00000273179 CCKBRP32239 447 aa7.76□□□□□ -1.17
CTDSPL-201ENST00000273179 PGGT1BP53609 377 aa7.76□□□□□ -1.17
CTDSPL-201ENST00000273179 MALLQ13021 153 aa7.76□□□□□ -1.17
CTDSPL-201ENST00000273179 PPM1JQ5JR12 505 aa7.76□□□□□ -1.17
CTDSPL-201ENST00000273179 SYPL2Q5VXT5 272 aa7.76□□□□□ -1.17
CTDSPL-201ENST00000273179 TMEM184AQ6ZMB5 413 aa7.76□□□□□ -1.17
CTDSPL-201ENST00000273179 RIMKLAQ8IXN7 391 aa7.76□□□□□ -1.17
CTDSPL-201ENST00000273179 GPR135Q8IZ08 494 aa7.76□□□□□ -1.17
CTDSPL-201ENST00000273179 TEX48A0A1B0GUV7 120 aa7.75□□□□□ -1.17
CTDSPL-201ENST00000273179 A0A1W2PP11 408 aa7.75□□□□□ -1.17
CTDSPL-201ENST00000273179 IFITM1P13164 125 aa7.75□□□□□ -1.17
CTDSPL-201ENST00000273179 SRSF3P84103 164 aaKnown RBP7.75□□□□□ -1.17
CTDSPL-201ENST00000273179 MFAP5Q13361 173 aa7.75□□□□□ -1.17
CTDSPL-201ENST00000273179 VWC2Q2TAL6 325 aa7.75□□□□□ -1.17
CTDSPL-201ENST00000273179 TCTN3Q6NUS6 607 aa7.75□□□□□ -1.17
CTDSPL-201ENST00000273179 IGDCC3Q8IVU1 814 aa7.75□□□□□ -1.17
CTDSPL-201ENST00000273179 OR8S1Q8NH09 359 aa7.75□□□□□ -1.17
CTDSPL-201ENST00000273179 RTN4IP1Q8WWV3 396 aaPredicted RBP7.75□□□□□ -1.17
CTDSPL-201ENST00000273179 HSD17B10Q99714 261 aaKnown RBP7.75□□□□□ -1.17
CTDSPL-201ENST00000273179 LRRC61Q9BV99 259 aa7.75□□□□□ -1.17
CTDSPL-201ENST00000273179 GPR35Q9HC97 309 aa7.75□□□□□ -1.17
CTDSPL-201ENST00000273179 SPANXB1Q9NS25 103 aaPredicted RBP7.75□□□□□ -1.17
CTDSPL-201ENST00000273179 TMEM106BQ9NUM4 274 aa7.75□□□□□ -1.17
CTDSPL-201ENST00000273179 ANKRD10Q9NXR5 420 aa7.75□□□□□ -1.17
CTDSPL-201ENST00000273179 MRPS16Q9Y3D3 137 aaKnown RBP7.75□□□□□ -1.17
CTDSPL-201ENST00000273179 RPL36Q9Y3U8 105 aaKnown RBP7.75□□□□□ -1.17
CTDSPL-201ENST00000273179 TCRBV5S1A1TA0A578 114 aa7.75□□□□□ -1.17
CTDSPL-201ENST00000273179 M0QYG6 137 aa7.75□□□□□ -1.17
CTDSPL-201ENST00000273179 CLDN11O75508 207 aa7.75□□□□□ -1.17
CTDSPL-201ENST00000273179 TBX6O95947 436 aaPredicted RBP7.75□□□□□ -1.17
CTDSPL-201ENST00000273179 NRASP01111 189 aa7.75□□□□□ -1.17
CTDSPL-201ENST00000273179 HLA-DQA2P01906 255 aa7.75□□□□□ -1.17
CTDSPL-201ENST00000273179 HGFP14210 728 aa7.75□□□□□ -1.17
CTDSPL-201ENST00000273179 PAX1P15863 534 aa7.75□□□□□ -1.17
CTDSPL-201ENST00000273179 C8orf86Q6ZUL3 223 aa7.75□□□□□ -1.17
CTDSPL-201ENST00000273179 Q71RC1 249 aaPredicted RBP7.75□□□□□ -1.17
CTDSPL-201ENST00000273179 HSD11B1LQ7Z5J1 315 aa7.75□□□□□ -1.17
CTDSPL-201ENST00000273179 OR13A1Q8NGR1 328 aa7.75□□□□□ -1.17
CTDSPL-201ENST00000273179 C2orf15Q8WU43 125 aaKnown RBP7.75□□□□□ -1.17
CTDSPL-201ENST00000273179 EGLN3Q9H6Z9 239 aa7.75□□□□□ -1.17
CTDSPL-201ENST00000273179 ELL3Q9HB65 397 aaPredicted RBP7.75□□□□□ -1.17
CTDSPL-201ENST00000273179 GKN1Q9NS71 199 aa7.75□□□□□ -1.17
CTDSPL-201ENST00000273179 NDUFC2O95298 119 aa7.75□□□□□ -1.17
CTDSPL-201ENST00000273179 MRPL3P09001 348 aaKnown RBP7.75□□□□□ -1.17
CTDSPL-201ENST00000273179 CYCSP99999 105 aaKnown RBP7.75□□□□□ -1.17
CTDSPL-201ENST00000273179 HSPB3Q12988 150 aa7.75□□□□□ -1.17
CTDSPL-201ENST00000273179 MSMO1Q15800 293 aa7.75□□□□□ -1.17
CTDSPL-201ENST00000273179 TMEM97Q5BJF2 176 aa7.75□□□□□ -1.17
CTDSPL-201ENST00000273179 GLDNQ6ZMI3 551 aaPredicted RBP7.75□□□□□ -1.17
CTDSPL-201ENST00000273179 SLC25A28Q96A46 364 aa7.75□□□□□ -1.17
CTDSPL-201ENST00000273179 TRAPPC1Q9Y5R8 145 aa7.75□□□□□ -1.17
CTDSPL-201ENST00000273179 ZNF860A6NHJ4 632 aa7.74□□□□□ -1.17
CTDSPL-201ENST00000273179 LILRA5A6NI73 299 aa7.74□□□□□ -1.17
CTDSPL-201ENST00000273179 PRKNO60260 465 aaPredicted RBP7.74□□□□□ -1.17
CTDSPL-201ENST00000273179 NDUFB8O95169 186 aa7.74□□□□□ -1.17
CTDSPL-201ENST00000273179 IGFBP6P24592 240 aaPredicted RBP7.74□□□□□ -1.17
CTDSPL-201ENST00000273179 PSMB3P49720 205 aa7.74□□□□□ -1.17
CTDSPL-201ENST00000273179 CCL11P51671 97 aa7.74□□□□□ -1.17
CTDSPL-201ENST00000273179 TRMT12Q53H54 448 aaKnown RBP7.74□□□□□ -1.17
CTDSPL-201ENST00000273179 CD300LDQ6UXZ3 194 aa7.74□□□□□ -1.17
CTDSPL-201ENST00000273179 SFXN3Q9BWM7 321 aa7.74□□□□□ -1.17
CTDSPL-201ENST00000273179 LRTM1Q9HBL6 345 aa7.74□□□□□ -1.17
CTDSPL-201ENST00000273179 TAS2R5Q9NYW4 299 aa7.74□□□□□ -1.17
CTDSPL-201ENST00000273179 NUDT4Q9NZJ9 180 aa7.74□□□□□ -1.17
CTDSPL-201ENST00000273179 TSPAN11A1L157 253 aa7.74□□□□□ -1.17
CTDSPL-201ENST00000273179 NME4O00746 187 aa7.74□□□□□ -1.17
CTDSPL-201ENST00000273179 FAM106CPP0CH98 169 aa7.74□□□□□ -1.17
CTDSPL-201ENST00000273179 TSPOP30536 169 aa7.74□□□□□ -1.17
CTDSPL-201ENST00000273179 IL13RA2Q14627 380 aa7.74□□□□□ -1.17
CTDSPL-201ENST00000273179 FAM106AQ4KMX7 169 aa7.74□□□□□ -1.17
CTDSPL-201ENST00000273179 MORN2Q502X0 79 aa7.74□□□□□ -1.17
CTDSPL-201ENST00000273179 MIDNQ504T8 468 aa7.74□□□□□ -1.17
CTDSPL-201ENST00000273179 PRSS36Q5K4E3 855 aa7.74□□□□□ -1.17
CTDSPL-201ENST00000273179 FAM19A5Q7Z5A7 132 aaPredicted RBP7.74□□□□□ -1.17
CTDSPL-201ENST00000273179 ZNF595Q8IYB9 648 aa7.74□□□□□ -1.17
CTDSPL-201ENST00000273179 OR13H1Q8NG92 308 aa7.74□□□□□ -1.17
CTDSPL-201ENST00000273179 KIR2DL5BQ8NHK3 375 aa7.74□□□□□ -1.17
CTDSPL-201ENST00000273179 ZNF502Q8TBZ5 544 aa7.74□□□□□ -1.17
CTDSPL-201ENST00000273179 SLC25A19Q9HC21 320 aa7.74□□□□□ -1.17
CTDSPL-201ENST00000273179 SPANXCQ9NY87 97 aa7.74□□□□□ -1.17
CTDSPL-201ENST00000273179 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.74□□□□□ -1.17
CTDSPL-201ENST00000273179 DUXBA0A1W2PPF3 345 aa7.74□□□□□ -1.17
CTDSPL-201ENST00000273179 HLA-AP01891 365 aaKnown RBP7.74□□□□□ -1.17
CTDSPL-201ENST00000273179 FGF3P11487 239 aaPredicted RBP7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms