RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 CDC34P49427 236 aaPredicted RBP12.16□□□□□ -0.46
CDH3-201ENST00000264012 MOGAT2Q3SYC2 334 aa12.16□□□□□ -0.46
CDH3-201ENST00000264012 PLAC9Q5JTB6 97 aa12.16□□□□□ -0.46
CDH3-201ENST00000264012 NKX2-6A6NCS4 301 aa12.16□□□□□ -0.46
CDH3-201ENST00000264012 PRR33A8MZF0 331 aa12.16□□□□□ -0.46
CDH3-201ENST00000264012 KLF4O43474 513 aa12.16□□□□□ -0.46
CDH3-201ENST00000264012 UCP2P55851 309 aa12.16□□□□□ -0.46
CDH3-201ENST00000264012 FAM3AP98173 230 aa12.16□□□□□ -0.46
CDH3-201ENST00000264012 C1orf185Q5T7R7 199 aa12.16□□□□□ -0.46
CDH3-201ENST00000264012 ACSM6Q6P461 480 aa12.16□□□□□ -0.46
CDH3-201ENST00000264012 OR10G4Q8NGN3 311 aa12.16□□□□□ -0.46
CDH3-201ENST00000264012 OR10G9Q8NGN4 311 aa12.16□□□□□ -0.46
CDH3-201ENST00000264012 OR10G7Q8NGN6 311 aa12.16□□□□□ -0.46
CDH3-201ENST00000264012 CHRDL1Q9BU40 450 aa12.16□□□□□ -0.46
CDH3-201ENST00000264012 GAR1Q9NY12 217 aaKnown RBP12.16□□□□□ -0.46
CDH3-201ENST00000264012 PRSS50Q9UI38 385 aa12.16□□□□□ -0.46
CDH3-201ENST00000264012 CACNA1GO43497 2377 aa12.16□□□□□ -0.46
CDH3-201ENST00000264012 PATJQ8NI35 1801 aa12.16□□□□□ -0.46
CDH3-201ENST00000264012 IGKV3D-11A0A0A0MRZ8 115 aa12.16□□□□□ -0.46
CDH3-201ENST00000264012 CDX4O14627 284 aaPredicted RBP12.16□□□□□ -0.46
CDH3-201ENST00000264012 ERVFC1-1P60608 527 aa12.16□□□□□ -0.46
CDH3-201ENST00000264012 SMUG1Q53HV7 270 aa12.16□□□□□ -0.46
CDH3-201ENST00000264012 PPP1R32Q7Z5V6 425 aa12.16□□□□□ -0.46
CDH3-201ENST00000264012 PRR7Q8TB68 274 aa12.16□□□□□ -0.46
CDH3-201ENST00000264012 SEBOXQ9HB31 216 aaPredicted RBP12.16□□□□□ -0.46
CDH3-201ENST00000264012 FAM206AQ9NX38 181 aa12.16□□□□□ -0.46
CDH3-201ENST00000264012 SLC45A2Q9UMX9 530 aa12.16□□□□□ -0.46
CDH3-201ENST00000264012 RTTNQ86VV8 2226 aa12.16□□□□□ -0.46
CDH3-201ENST00000264012 XKRY2A2RUG3 117 aa12.15□□□□□ -0.46
CDH3-201ENST00000264012 Q56UQ5 140 aa12.15□□□□□ -0.46
CDH3-201ENST00000264012 DTD1Q8TEA8 209 aa12.15□□□□□ -0.46
CDH3-201ENST00000264012 OPN3Q9H1Y3 402 aaPredicted RBP12.15□□□□□ -0.46
CDH3-201ENST00000264012 ZNF236Q9UL36 1845 aa12.15□□□□□ -0.46
CDH3-201ENST00000264012 LNP1A1A4G5 178 aa12.15□□□□□ -0.46
CDH3-201ENST00000264012 AHRRA9YTQ3 701 aa12.15□□□□□ -0.46
CDH3-201ENST00000264012 NPIPB9F8W1W9 429 aa12.15□□□□□ -0.46
CDH3-201ENST00000264012 NTF3P20783 257 aa12.15□□□□□ -0.46
CDH3-201ENST00000264012 VAX1Q5SQQ9 334 aa12.15□□□□□ -0.46
CDH3-201ENST00000264012 FAM219AQ8IW50 185 aa12.15□□□□□ -0.46
CDH3-201ENST00000264012 OR1A1Q9P1Q5 309 aa12.15□□□□□ -0.46
CDH3-201ENST00000264012 IGHV3OR15-7A0A075B7D8 119 aa12.15□□□□□ -0.46
CDH3-201ENST00000264012 A0A1W2PRD5 423 aa12.15□□□□□ -0.46
CDH3-201ENST00000264012 A0A1W2PRF3 423 aa12.15□□□□□ -0.46
CDH3-201ENST00000264012 A0A1W2PRM7 423 aa12.15□□□□□ -0.46
CDH3-201ENST00000264012 RHOBP62745 196 aa12.15□□□□□ -0.46
CDH3-201ENST00000264012 ZNF260Q3ZCT1 412 aa12.15□□□□□ -0.46
CDH3-201ENST00000264012 SRXN1Q9BYN0 137 aa12.15□□□□□ -0.46
CDH3-201ENST00000264012 TOLLIPQ9H0E2 274 aa12.15□□□□□ -0.46
CDH3-201ENST00000264012 POMT1Q9Y6A1 747 aa12.15□□□□□ -0.46
CDH3-201ENST00000264012 TMEM229AB2RXF0 380 aa12.15□□□□□ -0.46
CDH3-201ENST00000264012 VSIG10L2P0DP72 767 aa12.15□□□□□ -0.46
CDH3-201ENST00000264012 ATP1A1-AS1Q5TC04 95 aa12.15□□□□□ -0.46
CDH3-201ENST00000264012 UNQ9370/PRO34162Q6UXP9 181 aa12.15□□□□□ -0.46
CDH3-201ENST00000264012 ATP5SQ99766 215 aa12.15□□□□□ -0.46
CDH3-201ENST00000264012 ZDHHC11Q9H8X9 412 aa12.15□□□□□ -0.46
CDH3-201ENST00000264012 UCNP55089 124 aa12.14□□□□□ -0.47
CDH3-201ENST00000264012 FGF12P61328 243 aa12.14□□□□□ -0.47
CDH3-201ENST00000264012 ZNF154Q13106 437 aa12.14□□□□□ -0.47
CDH3-201ENST00000264012 MARVELD3Q96A59 401 aa12.14□□□□□ -0.47
CDH3-201ENST00000264012 GHITMQ9H3K2 345 aa12.14□□□□□ -0.47
CDH3-201ENST00000264012 ZNF737O75373 536 aa12.14□□□□□ -0.47
CDH3-201ENST00000264012 ZBTB34Q8NCN2 500 aa12.14□□□□□ -0.47
CDH3-201ENST00000264012 MEOX2P50222 304 aa12.14□□□□□ -0.47
CDH3-201ENST00000264012 FGF8P55075 233 aaPredicted RBP12.14□□□□□ -0.47
CDH3-201ENST00000264012 ZNF441Q8N8Z8 693 aa12.14□□□□□ -0.47
CDH3-201ENST00000264012 OR8B3Q8NGG8 313 aa12.14□□□□□ -0.47
CDH3-201ENST00000264012 OR8B2Q96RD0 313 aa12.14□□□□□ -0.47
CDH3-201ENST00000264012 HSD17B10Q99714 261 aaKnown RBP12.14□□□□□ -0.47
CDH3-201ENST00000264012 AKIRIN1Q9H9L7 192 aaPredicted RBP12.14□□□□□ -0.47
CDH3-201ENST00000264012 NPIPB13A6NJU9 1138 aa12.14□□□□□ -0.47
CDH3-201ENST00000264012 NPIPB4C9JG80 1138 aa12.14□□□□□ -0.47
CDH3-201ENST00000264012 CCL21O00585 134 aa12.14□□□□□ -0.47
CDH3-201ENST00000264012 KRTCAP3Q53RY4 240 aa12.14□□□□□ -0.47
CDH3-201ENST00000264012 FNDC7Q5VTL7 733 aa12.14□□□□□ -0.47
CDH3-201ENST00000264012 ZNF705AQ6ZN79 300 aaPredicted RBP12.14□□□□□ -0.47
CDH3-201ENST00000264012 C1orf174Q8IYL3 243 aa12.14□□□□□ -0.47
CDH3-201ENST00000264012 TMPRSS5Q9H3S3 457 aa12.14□□□□□ -0.47
CDH3-201ENST00000264012 Q9N2K0 584 aa12.14□□□□□ -0.47
CDH3-201ENST00000264012 RNF24Q9Y225 148 aa12.14□□□□□ -0.47
CDH3-201ENST00000264012 PDCD11Q14690 1871 aaKnown RBP12.13□□□□□ -0.47
CDH3-201ENST00000264012 TOX4O94842 621 aa12.13□□□□□ -0.47
CDH3-201ENST00000264012 OR5I1Q13606 314 aa12.13□□□□□ -0.47
CDH3-201ENST00000264012 TNXAQ16473 311 aa12.13□□□□□ -0.47
CDH3-201ENST00000264012 TMEM241Q24JQ0 296 aa12.13□□□□□ -0.47
CDH3-201ENST00000264012 SNAI3Q3KNW1 292 aa12.13□□□□□ -0.47
CDH3-201ENST00000264012 G6PC2Q9NQR9 355 aa12.13□□□□□ -0.47
CDH3-201ENST00000264012 FOXJ2Q9P0K8 574 aa12.13□□□□□ -0.47
CDH3-201ENST00000264012 WIPI2Q9Y4P8 454 aa12.13□□□□□ -0.47
CDH3-201ENST00000264012 SERTM2A0A1B0GWG4 89 aa12.13□□□□□ -0.47
CDH3-201ENST00000264012 TMEM218A2RU14 115 aa12.13□□□□□ -0.47
CDH3-201ENST00000264012 DBX1A6NMT0 343 aa12.13□□□□□ -0.47
CDH3-201ENST00000264012 FAM157AC9JC47 383 aa12.13□□□□□ -0.47
CDH3-201ENST00000264012 RECKO95980 971 aa12.13□□□□□ -0.47
CDH3-201ENST00000264012 HOXD4P09016 255 aaPredicted RBP12.13□□□□□ -0.47
CDH3-201ENST00000264012 PRDX2P32119 198 aa12.13□□□□□ -0.47
CDH3-201ENST00000264012 PPP1CCP36873 323 aaKnown RBP12.13□□□□□ -0.47
CDH3-201ENST00000264012 LYPD8Q6UX82 237 aa12.13□□□□□ -0.47
CDH3-201ENST00000264012 MMP24Q9Y5R2 645 aa12.13□□□□□ -0.47
CDH3-201ENST00000264012 ZNF785A8K8V0 405 aa12.13□□□□□ -0.47
CDH3-201ENST00000264012 CRYBA1P05813 215 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms