RNA–Protein interactions for RNA: ENST00000263351.9

ZNF541-201, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-201ENST00000263351 IL22RA1Q8N6P7 574 aa14.13□□□□□ -0.15
ZNF541-201ENST00000263351 ZNF732B4DXR9 585 aa14.13□□□□□ -0.15
ZNF541-201ENST00000263351 HIST1H2BKO60814 126 aa14.13□□□□□ -0.15
ZNF541-201ENST00000263351 HIST1H2BJP06899 126 aa14.13□□□□□ -0.15
ZNF541-201ENST00000263351 KLK3P07288 261 aaPredicted RBP14.13□□□□□ -0.15
ZNF541-201ENST00000263351 MMP9P14780 707 aa14.13□□□□□ -0.15
ZNF541-201ENST00000263351 HIST1H2BOP23527 126 aa14.13□□□□□ -0.15
ZNF541-201ENST00000263351 HIST1H2BBP33778 126 aa14.13□□□□□ -0.15
ZNF541-201ENST00000263351 HIST1H2BDP58876 126 aa14.13□□□□□ -0.15
ZNF541-201ENST00000263351 RPL23AP62750 156 aaKnown RBP14.13□□□□□ -0.15
ZNF541-201ENST00000263351 HIST1H2BCP62807 126 aa14.13□□□□□ -0.15
ZNF541-201ENST00000263351 ARF1P84077 181 aaKnown RBP14.13□□□□□ -0.15
ZNF541-201ENST00000263351 EIF3IQ13347 325 aaKnown RBP14.13□□□□□ -0.15
ZNF541-201ENST00000263351 HIST2H2BEQ16778 126 aa14.13□□□□□ -0.15
ZNF541-201ENST00000263351 TRIM61Q5EBN2 209 aa14.13□□□□□ -0.15
ZNF541-201ENST00000263351 OR2B11Q5JQS5 317 aa14.13□□□□□ -0.15
ZNF541-201ENST00000263351 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.13□□□□□ -0.15
ZNF541-201ENST00000263351 LYSMD4Q5XG99 296 aa14.13□□□□□ -0.15
ZNF541-201ENST00000263351 CMTM1Q8IZ96 169 aa14.13□□□□□ -0.15
ZNF541-201ENST00000263351 COMMD1Q8N668 190 aa14.13□□□□□ -0.15
ZNF541-201ENST00000263351 MAFAQ8NHW3 353 aaPredicted RBP14.13□□□□□ -0.15
ZNF541-201ENST00000263351 CPT1CQ8TCG5 803 aa14.13□□□□□ -0.15
ZNF541-201ENST00000263351 TCTEX1D2Q8WW35 142 aa14.13□□□□□ -0.15
ZNF541-201ENST00000263351 HIST1H2BHQ93079 126 aa14.13□□□□□ -0.15
ZNF541-201ENST00000263351 HIST1H2BNQ99877 126 aa14.13□□□□□ -0.15
ZNF541-201ENST00000263351 HIST1H2BMQ99879 126 aa14.13□□□□□ -0.15
ZNF541-201ENST00000263351 RHBDL1O75783 438 aa14.12□□□□□ -0.15
ZNF541-201ENST00000263351 CDS2O95674 445 aa14.12□□□□□ -0.15
ZNF541-201ENST00000263351 DEFA4P12838 97 aa14.12□□□□□ -0.15
ZNF541-201ENST00000263351 GDF1P27539 372 aa14.12□□□□□ -0.15
ZNF541-201ENST00000263351 RAB11AP62491 216 aa14.12□□□□□ -0.15
ZNF541-201ENST00000263351 EXT1Q16394 746 aa14.12□□□□□ -0.15
ZNF541-201ENST00000263351 TMEM211Q6ICI0 200 aa14.12□□□□□ -0.15
ZNF541-201ENST00000263351 BEND4Q6ZU67 534 aa14.12□□□□□ -0.15
ZNF541-201ENST00000263351 CLDND2Q8NHS1 167 aa14.12□□□□□ -0.15
ZNF541-201ENST00000263351 TK1P04183 234 aa14.12□□□□□ -0.15
ZNF541-201ENST00000263351 CD55P08174 381 aa14.12□□□□□ -0.15
ZNF541-201ENST00000263351 METTL15P1P0C7V9 234 aa14.12□□□□□ -0.15
ZNF541-201ENST00000263351 UCP3P55916 312 aa14.12□□□□□ -0.15
ZNF541-201ENST00000263351 ZNF726P1Q15940 193 aa14.12□□□□□ -0.15
ZNF541-201ENST00000263351 KRTAP27-1Q3LI81 207 aa14.12□□□□□ -0.15
ZNF541-201ENST00000263351 ZNF880Q6PDB4 577 aa14.12□□□□□ -0.15
ZNF541-201ENST00000263351 OR10D4PQ8NGN7 298 aa14.12□□□□□ -0.15
ZNF541-201ENST00000263351 GPR146Q96CH1 333 aa14.12□□□□□ -0.15
ZNF541-201ENST00000263351 TMEM56Q96MV1 263 aa14.12□□□□□ -0.15
ZNF541-201ENST00000263351 TOLLIPQ9H0E2 274 aa14.12□□□□□ -0.15
ZNF541-201ENST00000263351 RNF115Q9Y4L5 304 aa14.12□□□□□ -0.15
ZNF541-201ENST00000263351 TMEM56-RWDD3S4R434 201 aa14.12□□□□□ -0.15
ZNF541-201ENST00000263351 PGLYRP1O75594 196 aaPredicted RBP14.11□□□□□ -0.15
ZNF541-201ENST00000263351 PDGFBP01127 241 aaPredicted RBP14.11□□□□□ -0.15
ZNF541-201ENST00000263351 ZNF16P17020 682 aaPredicted RBP14.11□□□□□ -0.15
ZNF541-201ENST00000263351 RAB5CP51148 216 aa14.11□□□□□ -0.15
ZNF541-201ENST00000263351 ZNF266Q14584 549 aa14.11□□□□□ -0.15
ZNF541-201ENST00000263351 ZNF383Q8NA42 475 aa14.11□□□□□ -0.15
ZNF541-201ENST00000263351 ADGRG7Q96K78 797 aa14.11□□□□□ -0.15
ZNF541-201ENST00000263351 PCED1AQ9H1Q7 454 aa14.11□□□□□ -0.15
ZNF541-201ENST00000263351 NAPSAO96009 420 aa14.11□□□□□ -0.15
ZNF541-201ENST00000263351 P04436 131 aa14.11□□□□□ -0.15
ZNF541-201ENST00000263351 FGF5P12034 268 aa14.11□□□□□ -0.15
ZNF541-201ENST00000263351 ID3Q02535 119 aa14.11□□□□□ -0.15
ZNF541-201ENST00000263351 AKR1C8PQ5T2L2 129 aa14.11□□□□□ -0.15
ZNF541-201ENST00000263351 PCSK4Q6UW60 755 aa14.11□□□□□ -0.15
ZNF541-201ENST00000263351 RPRMQ9NS64 109 aa14.11□□□□□ -0.15
ZNF541-201ENST00000263351 ZMAT5Q9UDW3 170 aaKnown RBP14.11□□□□□ -0.15
ZNF541-201ENST00000263351 ERRFI1Q9UJM3 462 aaPredicted RBP14.11□□□□□ -0.15
ZNF541-201ENST00000263351 GALR2O43603 387 aaPredicted RBP14.1□□□□□ -0.15
ZNF541-201ENST00000263351 IFNA17P01571 189 aa14.1□□□□□ -0.15
ZNF541-201ENST00000263351 IGKV1-39P01597 117 aa14.1□□□□□ -0.15
ZNF541-201ENST00000263351 TFF1P04155 84 aa14.1□□□□□ -0.15
ZNF541-201ENST00000263351 IGKV1D-39P04432 117 aa14.1□□□□□ -0.15
ZNF541-201ENST00000263351 LPAL2Q16609 132 aa14.1□□□□□ -0.15
ZNF541-201ENST00000263351 TUSC5Q8IXB3 177 aa14.1□□□□□ -0.15
ZNF541-201ENST00000263351 LINC00469Q8N7U9 141 aa14.1□□□□□ -0.15
ZNF541-201ENST00000263351 OR2V1Q8NHB1 315 aa14.1□□□□□ -0.15
ZNF541-201ENST00000263351 PPP1R3CQ9UQK1 317 aa14.1□□□□□ -0.15
ZNF541-201ENST00000263351 MRPS17Q9Y2R5 130 aaKnown RBP14.1□□□□□ -0.15
ZNF541-201ENST00000263351 CNOT4O95628 575 aaKnown RBP14.1□□□□□ -0.15
ZNF541-201ENST00000263351 HOXA5P20719 270 aa14.1□□□□□ -0.15
ZNF541-201ENST00000263351 ELLP55199 621 aaPredicted RBP14.1□□□□□ -0.15
ZNF541-201ENST00000263351 SLC25A24Q6NUK1 477 aa14.1□□□□□ -0.15
ZNF541-201ENST00000263351 HAPLN4Q86UW8 402 aa14.1□□□□□ -0.15
ZNF541-201ENST00000263351 OR2Y1Q8NGV0 311 aa14.1□□□□□ -0.15
ZNF541-201ENST00000263351 FRZBQ92765 325 aa14.1□□□□□ -0.15
ZNF541-201ENST00000263351 MALSU1Q96EH3 234 aa14.1□□□□□ -0.15
ZNF541-201ENST00000263351 KIAA1456Q9P272 454 aa14.1□□□□□ -0.15
ZNF541-201ENST00000263351 CXorf65A6NEN9 183 aa14.09□□□□□ -0.15
ZNF541-201ENST00000263351 SLC34A2O95436 690 aa14.09□□□□□ -0.15
ZNF541-201ENST00000263351 PMELP40967 661 aa14.09□□□□□ -0.15
ZNF541-201ENST00000263351 STARD6P59095 220 aa14.09□□□□□ -0.15
ZNF541-201ENST00000263351 WDR25Q64LD2 544 aaPredicted RBP14.09□□□□□ -0.15
ZNF541-201ENST00000263351 SP5Q6BEB4 398 aaPredicted RBP14.09□□□□□ -0.15
ZNF541-201ENST00000263351 TMEM105Q8N8V8 129 aa14.09□□□□□ -0.15
ZNF541-201ENST00000263351 ABHD5Q8WTS1 349 aa14.09□□□□□ -0.15
ZNF541-201ENST00000263351 IL36GQ9NZH8 169 aa14.09□□□□□ -0.15
ZNF541-201ENST00000263351 FAM166BA8MTA8 275 aa14.09□□□□□ -0.15
ZNF541-201ENST00000263351 COL8A2P25067 703 aa14.09□□□□□ -0.15
ZNF541-201ENST00000263351 FKBP2P26885 142 aaKnown RBP14.09□□□□□ -0.15
ZNF541-201ENST00000263351 NECAP1Q8NC96 275 aa14.09□□□□□ -0.15
ZNF541-201ENST00000263351 INTS12Q96CB8 462 aaKnown RBP14.09□□□□□ -0.15
ZNF541-201ENST00000263351 RBMXL1Q96E39 390 aaKnown RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms