RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 A0A0A6YYJ9 748 aa11.79□□□□□ -0.52
PDGFRB-201ENST00000261799 PGA4P0DJD7 388 aa11.79□□□□□ -0.52
PDGFRB-201ENST00000261799 C16orf92Q96LL3 132 aa11.79□□□□□ -0.52
PDGFRB-201ENST00000261799 OR5AC1P0C628 307 aa11.78□□□□□ -0.52
PDGFRB-201ENST00000261799 CDC34P49427 236 aaPredicted RBP11.78□□□□□ -0.52
PDGFRB-201ENST00000261799 LSM11P83369 360 aaKnown RBP eCLIP11.78□□□□□ -0.52
PDGFRB-201ENST00000261799 ZXDCQ2QGD7 858 aaPredicted RBP11.78□□□□□ -0.52
PDGFRB-201ENST00000261799 SLC26A10Q8NG04 563 aa11.78□□□□□ -0.52
PDGFRB-201ENST00000261799 OR4X1Q8NH49 305 aa11.78□□□□□ -0.52
PDGFRB-201ENST00000261799 OR4A5Q8NH83 315 aa11.78□□□□□ -0.52
PDGFRB-201ENST00000261799 NUMA1Q14980 2115 aa11.78□□□□□ -0.52
PDGFRB-201ENST00000261799 TIAF1O95411 115 aa11.78□□□□□ -0.52
PDGFRB-201ENST00000261799 MGPP08493 103 aa11.78□□□□□ -0.52
PDGFRB-201ENST00000261799 MAGEB1P43366 347 aa11.78□□□□□ -0.52
PDGFRB-201ENST00000261799 TMEM30BQ3MIR4 351 aa11.78□□□□□ -0.52
PDGFRB-201ENST00000261799 PIGYQ3MUY2 71 aa11.78□□□□□ -0.52
PDGFRB-201ENST00000261799 LILRB4Q8NHJ6 448 aa11.78□□□□□ -0.52
PDGFRB-201ENST00000261799 SIGLEC12Q96PQ1 595 aa11.78□□□□□ -0.52
PDGFRB-201ENST00000261799 SPSB2Q99619 263 aa11.78□□□□□ -0.52
PDGFRB-201ENST00000261799 NTN4Q9HB63 628 aa11.78□□□□□ -0.52
PDGFRB-201ENST00000261799 TDRD15B5MCY1 1934 aaKnown RBP11.78□□□□□ -0.52
PDGFRB-201ENST00000261799 OIP5O43482 229 aa11.78□□□□□ -0.52
PDGFRB-201ENST00000261799 COX5BP10606 129 aa11.78□□□□□ -0.52
PDGFRB-201ENST00000261799 CD59P13987 128 aa11.78□□□□□ -0.52
PDGFRB-201ENST00000261799 RPL13AP40429 203 aaKnown RBP11.78□□□□□ -0.52
PDGFRB-201ENST00000261799 KHDC3LQ587J8 217 aa11.78□□□□□ -0.52
PDGFRB-201ENST00000261799 ADIPOR1Q96A54 375 aa11.78□□□□□ -0.52
PDGFRB-201ENST00000261799 EEF1AKMT3Q96AZ1 226 aa11.78□□□□□ -0.52
PDGFRB-201ENST00000261799 TTC3P53804 2025 aa11.78□□□□□ -0.52
PDGFRB-201ENST00000261799 MYO18AQ92614 2054 aaKnown RBP11.78□□□□□ -0.52
PDGFRB-201ENST00000261799 CTSDP07339 412 aaPredicted RBP11.78□□□□□ -0.52
PDGFRB-201ENST00000261799 RAB9AP51151 201 aa11.78□□□□□ -0.52
PDGFRB-201ENST00000261799 BSPH1Q075Z2 132 aa11.78□□□□□ -0.52
PDGFRB-201ENST00000261799 DTD1Q8TEA8 209 aa11.78□□□□□ -0.52
PDGFRB-201ENST00000261799 IL11P20809 199 aa11.77□□□□□ -0.52
PDGFRB-201ENST00000261799 CELF2-AS1Q8N7Q2 184 aa11.77□□□□□ -0.52
PDGFRB-201ENST00000261799 FAM103A1Q9BTL3 118 aaKnown RBP11.77□□□□□ -0.52
PDGFRB-201ENST00000261799 DUSP21Q9H596 190 aa11.77□□□□□ -0.52
PDGFRB-201ENST00000261799 KLK11Q9UBX7 282 aa11.77□□□□□ -0.52
PDGFRB-201ENST00000261799 ZMAT5Q9UDW3 170 aaKnown RBP11.77□□□□□ -0.52
PDGFRB-201ENST00000261799 ANXA10Q9UJ72 324 aa11.77□□□□□ -0.52
PDGFRB-201ENST00000261799 hCG_38984A0A1B0GV85 526 aa11.77□□□□□ -0.52
PDGFRB-201ENST00000261799 NKX2-6A6NCS4 301 aa11.77□□□□□ -0.52
PDGFRB-201ENST00000261799 DHRS7CA6NNS2 312 aa11.77□□□□□ -0.52
PDGFRB-201ENST00000261799 HPRT1P00492 218 aa11.77□□□□□ -0.52
PDGFRB-201ENST00000261799 CD40P25942 277 aa11.77□□□□□ -0.52
PDGFRB-201ENST00000261799 FAM27D1Q5T7N8 215 aa11.77□□□□□ -0.52
PDGFRB-201ENST00000261799 LRRTM1Q86UE6 522 aa11.77□□□□□ -0.52
PDGFRB-201ENST00000261799 MSRB3Q8IXL7 192 aa11.77□□□□□ -0.52
PDGFRB-201ENST00000261799 ABHD12Q8N2K0 398 aa11.77□□□□□ -0.52
PDGFRB-201ENST00000261799 BVESQ8NE79 360 aa11.77□□□□□ -0.52
PDGFRB-201ENST00000261799 ZNF426Q9BUY5 554 aa11.77□□□□□ -0.52
PDGFRB-201ENST00000261799 NEUROG3Q9Y4Z2 214 aa11.77□□□□□ -0.52
PDGFRB-201ENST00000261799 CORTO00230 105 aa11.77□□□□□ -0.53
PDGFRB-201ENST00000261799 IFI6P09912 130 aa11.77□□□□□ -0.53
PDGFRB-201ENST00000261799 MPV17P39210 176 aa11.77□□□□□ -0.53
PDGFRB-201ENST00000261799 TNFSF10P50591 281 aa11.77□□□□□ -0.53
PDGFRB-201ENST00000261799 HMGA2P52926 109 aa11.77□□□□□ -0.53
PDGFRB-201ENST00000261799 FAM27E3Q08E93 113 aa11.77□□□□□ -0.53
PDGFRB-201ENST00000261799 KLF14Q8TD94 323 aaPredicted RBP11.77□□□□□ -0.53
PDGFRB-201ENST00000261799 MS4A3Q96HJ5 214 aa11.77□□□□□ -0.53
PDGFRB-201ENST00000261799 C7orf69Q9H7B7 122 aa11.77□□□□□ -0.53
PDGFRB-201ENST00000261799 CBLN4Q9NTU7 201 aa11.77□□□□□ -0.53
PDGFRB-201ENST00000261799 J3QR06 171 aa11.77□□□□□ -0.53
PDGFRB-201ENST00000261799 BMPR1BO00238 502 aa11.77□□□□□ -0.53
PDGFRB-201ENST00000261799 RBM11P57052 281 aaKnown RBP11.77□□□□□ -0.53
PDGFRB-201ENST00000261799 RIPPLY2Q5TAB7 128 aa11.77□□□□□ -0.53
PDGFRB-201ENST00000261799 FAM222BQ8WU58 562 aa11.77□□□□□ -0.53
PDGFRB-201ENST00000261799 A0A0U1RQV5 110 aa11.77□□□□□ -0.53
PDGFRB-201ENST00000261799 DXOO77932 396 aaKnown RBP11.77□□□□□ -0.53
PDGFRB-201ENST00000261799 YIPF6Q96EC8 236 aa11.77□□□□□ -0.53
PDGFRB-201ENST00000261799 MCM3APO60318 1980 aa11.76□□□□□ -0.53
PDGFRB-201ENST00000261799 IGKV1-8A0A0C4DH67 115 aa11.76□□□□□ -0.53
PDGFRB-201ENST00000261799 E9PLN8 166 aa11.76□□□□□ -0.53
PDGFRB-201ENST00000261799 NTF3P20783 257 aa11.76□□□□□ -0.53
PDGFRB-201ENST00000261799 PNKDQ8N490 385 aa11.76□□□□□ -0.53
PDGFRB-201ENST00000261799 OR2T10Q8NGZ9 312 aa11.76□□□□□ -0.53
PDGFRB-201ENST00000261799 ZNF488Q96MN9 340 aa11.76□□□□□ -0.53
PDGFRB-201ENST00000261799 VKORC1Q9BQB6 163 aa11.76□□□□□ -0.53
PDGFRB-201ENST00000261799 ARFGEF1Q9Y6D6 1849 aa11.76□□□□□ -0.53
PDGFRB-201ENST00000261799 OR2C1O95371 312 aa11.76□□□□□ -0.53
PDGFRB-201ENST00000261799 ACAA1P09110 424 aaPredicted RBP11.76□□□□□ -0.53
PDGFRB-201ENST00000261799 G6PCP35575 357 aa11.76□□□□□ -0.53
PDGFRB-201ENST00000261799 RELQ04864 619 aaPredicted RBP11.76□□□□□ -0.53
PDGFRB-201ENST00000261799 NRN1LQ496H8 165 aa11.76□□□□□ -0.53
PDGFRB-201ENST00000261799 GAPTQ8N292 157 aa11.76□□□□□ -0.53
PDGFRB-201ENST00000261799 TMEFF2Q9UIK5 374 aaPredicted RBP11.76□□□□□ -0.53
PDGFRB-201ENST00000261799 FXYD1O00168 92 aa11.76□□□□□ -0.53
PDGFRB-201ENST00000261799 GATCO43716 136 aaKnown RBP11.76□□□□□ -0.53
PDGFRB-201ENST00000261799 SOX15O60248 233 aa11.76□□□□□ -0.53
PDGFRB-201ENST00000261799 TUSC1Q2TAM9 212 aa11.76□□□□□ -0.53
PDGFRB-201ENST00000261799 C1orf162Q8NEQ5 155 aaPredicted RBP11.76□□□□□ -0.53
PDGFRB-201ENST00000261799 TMEM45BQ96B21 275 aa11.76□□□□□ -0.53
PDGFRB-201ENST00000261799 ZNF629Q9UEG4 869 aaPredicted RBP11.76□□□□□ -0.53
PDGFRB-201ENST00000261799 IGHV3-72A0A0B4J1Y9 119 aa11.76□□□□□ -0.53
PDGFRB-201ENST00000261799 MMD2Q8IY49 270 aa11.76□□□□□ -0.53
PDGFRB-201ENST00000261799 SIGLECL1Q8N7X8 197 aa11.76□□□□□ -0.53
PDGFRB-201ENST00000261799 C5orf17Q8NAS9 161 aa11.76□□□□□ -0.53
PDGFRB-201ENST00000261799 ZNF738Q8NE65 137 aa11.76□□□□□ -0.53
PDGFRB-201ENST00000261799 STXBP6Q8NFX7 210 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms