RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 OR52I2Q8NH67 350 aa13.03□□□□□ -0.32
CCDC90B-201ENST00000260054 SETD6Q8TBK2 473 aa13.03□□□□□ -0.32
CCDC90B-201ENST00000260054 SCPEP1Q9HB40 452 aa13.03□□□□□ -0.32
CCDC90B-201ENST00000260054 Q9N2K0 584 aa13.03□□□□□ -0.32
CCDC90B-201ENST00000260054 MMP26Q9NRE1 261 aa13.03□□□□□ -0.32
CCDC90B-201ENST00000260054 OR6C3Q9NZP0 311 aa13.03□□□□□ -0.32
CCDC90B-201ENST00000260054 POLR3KQ9Y2Y1 108 aaPredicted RBP13.03□□□□□ -0.32
CCDC90B-201ENST00000260054 LINC00312Q9Y6C7 94 aa13.03□□□□□ -0.32
CCDC90B-201ENST00000260054 TRGV10A0A0A0MS01 117 aa13.02□□□□□ -0.32
CCDC90B-201ENST00000260054 PPIAL4CA0A0B4J2A2 164 aa13.02□□□□□ -0.32
CCDC90B-201ENST00000260054 A0A1W2PQ09 198 aa13.02□□□□□ -0.32
CCDC90B-201ENST00000260054 J3QRK9 145 aa13.02□□□□□ -0.32
CCDC90B-201ENST00000260054 FCER2P06734 321 aa13.02□□□□□ -0.32
CCDC90B-201ENST00000260054 PPIAL4GP0DN37 164 aa13.02□□□□□ -0.32
CCDC90B-201ENST00000260054 CCL3L1P16619 93 aa13.02□□□□□ -0.32
CCDC90B-201ENST00000260054 DTYMKP23919 212 aa13.02□□□□□ -0.32
CCDC90B-201ENST00000260054 OXA1LQ15070 435 aa13.02□□□□□ -0.32
CCDC90B-201ENST00000260054 TRIM16LQ309B1 348 aa13.02□□□□□ -0.32
CCDC90B-201ENST00000260054 PYDC2Q56P42 97 aa13.02□□□□□ -0.32
CCDC90B-201ENST00000260054 SMIM4Q8WVI0 70 aa13.02□□□□□ -0.32
CCDC90B-201ENST00000260054 CORO2AQ92828 525 aa13.02□□□□□ -0.32
CCDC90B-201ENST00000260054 OCSTAMPQ9BR26 566 aa13.02□□□□□ -0.32
CCDC90B-201ENST00000260054 ST6GALNAC5Q9BVH7 336 aa13.02□□□□□ -0.32
CCDC90B-201ENST00000260054 YLPM1P49750 1951 aaKnown RBP13.02□□□□□ -0.32
CCDC90B-201ENST00000260054 TEX15Q9BXT5 2789 aa13.02□□□□□ -0.33
CCDC90B-201ENST00000260054 ZANQ9Y493 2812 aa13.02□□□□□ -0.33
CCDC90B-201ENST00000260054 FLNAP21333 2647 aaKnown RBP13.02□□□□□ -0.33
CCDC90B-201ENST00000260054 IGKV1D-8A0A087WSZ0 117 aa13.02□□□□□ -0.33
CCDC90B-201ENST00000260054 IGHV2-70DA0A0C4DH43 119 aa13.02□□□□□ -0.33
CCDC90B-201ENST00000260054 B4DSR2 109 aa13.02□□□□□ -0.33
CCDC90B-201ENST00000260054 GABARAPH6UMI1 98 aa13.02□□□□□ -0.33
CCDC90B-201ENST00000260054 SULT1C2O00338 296 aa13.02□□□□□ -0.33
CCDC90B-201ENST00000260054 SMAD7O15105 426 aaKnown RBP13.02□□□□□ -0.33
CCDC90B-201ENST00000260054 MSMBP08118 114 aa13.02□□□□□ -0.33
CCDC90B-201ENST00000260054 CGB3P0DN86 165 aa13.02□□□□□ -0.33
CCDC90B-201ENST00000260054 CGB7P0DN87 165 aa13.02□□□□□ -0.33
CCDC90B-201ENST00000260054 IGHV4-31P0DP07 118 aa13.02□□□□□ -0.33
CCDC90B-201ENST00000260054 SSTR5P35346 364 aa13.02□□□□□ -0.33
CCDC90B-201ENST00000260054 MRPS10P82664 201 aaKnown RBP13.02□□□□□ -0.33
CCDC90B-201ENST00000260054 CR1LQ2VPA4 569 aa13.02□□□□□ -0.33
CCDC90B-201ENST00000260054 ZNF565Q8N9K5 539 aa13.02□□□□□ -0.33
CCDC90B-201ENST00000260054 FCAMRQ8WWV6 532 aa13.02□□□□□ -0.33
CCDC90B-201ENST00000260054 SDHCQ99643 169 aaPredicted RBP13.02□□□□□ -0.33
CCDC90B-201ENST00000260054 KLK11Q9UBX7 282 aa13.02□□□□□ -0.33
CCDC90B-201ENST00000260054 LPAR3Q9UBY5 353 aa13.02□□□□□ -0.33
CCDC90B-201ENST00000260054 UBE2J1Q9Y385 318 aaPredicted RBP13.02□□□□□ -0.33
CCDC90B-201ENST00000260054 C12orf77C9JDV5 145 aa13.01□□□□□ -0.33
CCDC90B-201ENST00000260054 GSTZ1O43708 216 aaPredicted RBP13.01□□□□□ -0.33
CCDC90B-201ENST00000260054 ENSAO43768 121 aaKnown RBP13.01□□□□□ -0.33
CCDC90B-201ENST00000260054 C17orf58Q2M2W7 97 aa13.01□□□□□ -0.33
CCDC90B-201ENST00000260054 MOB1BQ7L9L4 216 aa13.01□□□□□ -0.33
CCDC90B-201ENST00000260054 UBALD1Q8TB05 177 aa13.01□□□□□ -0.33
CCDC90B-201ENST00000260054 MSI2Q96DH6 328 aaKnown RBP13.01□□□□□ -0.33
CCDC90B-201ENST00000260054 ANAPC10Q9UM13 185 aa13.01□□□□□ -0.33
CCDC90B-201ENST00000260054 CELSR1Q9NYQ6 3014 aa13.01□□□□□ -0.33
CCDC90B-201ENST00000260054 POM121CA8CG34 1229 aa13□□□□□ -0.33
CCDC90B-201ENST00000260054 C15orf65H3BRN8 121 aa13□□□□□ -0.33
CCDC90B-201ENST00000260054 LANCL1O43813 399 aa13□□□□□ -0.33
CCDC90B-201ENST00000260054 LIPFP07098 398 aa13□□□□□ -0.33
CCDC90B-201ENST00000260054 CBX5P45973 191 aa13□□□□□ -0.33
CCDC90B-201ENST00000260054 DLX6P56179 175 aa13□□□□□ -0.33
CCDC90B-201ENST00000260054 ERVFRD-1P60508 538 aa13□□□□□ -0.33
CCDC90B-201ENST00000260054 HMGN3Q15651 99 aa13□□□□□ -0.33
CCDC90B-201ENST00000260054 C6orf183Q5T699 404 aa13□□□□□ -0.33
CCDC90B-201ENST00000260054 HOGA1Q86XE5 327 aa13□□□□□ -0.33
CCDC90B-201ENST00000260054 Q8N402 240 aa13□□□□□ -0.33
CCDC90B-201ENST00000260054 LINC01356Q8N9X3 169 aa13□□□□□ -0.33
CCDC90B-201ENST00000260054 SNAPC3Q92966 411 aa13□□□□□ -0.33
CCDC90B-201ENST00000260054 ZNF714Q96N38 554 aa13□□□□□ -0.33
CCDC90B-201ENST00000260054 TAF9BQ9HBM6 251 aa13□□□□□ -0.33
CCDC90B-201ENST00000260054 IFT46Q9NQC8 304 aa13□□□□□ -0.33
CCDC90B-201ENST00000260054 TAS2R3Q9NYW6 316 aa13□□□□□ -0.33
CCDC90B-201ENST00000260054 CALYQ9NYX4 217 aa13□□□□□ -0.33
CCDC90B-201ENST00000260054 MTFP1Q9UDX5 166 aa13□□□□□ -0.33
CCDC90B-201ENST00000260054 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.99□□□□□ -0.334e-7■■■■□ 26.6
CCDC90B-201ENST00000260054 KIR2DS1A0A191URI9 304 aa12.99□□□□□ -0.33
CCDC90B-201ENST00000260054 KBTBD11-OT1A0A1B0GTJ5 212 aa12.99□□□□□ -0.33
CCDC90B-201ENST00000260054 SCTP09683 121 aa12.99□□□□□ -0.33
CCDC90B-201ENST00000260054 ZNF728P0DKX0 622 aa12.99□□□□□ -0.33
CCDC90B-201ENST00000260054 GZMHP20718 246 aa12.99□□□□□ -0.33
CCDC90B-201ENST00000260054 SRSF7Q16629 238 aaKnown RBP eCLIP12.99□□□□□ -0.33
CCDC90B-201ENST00000260054 OR52W1Q6IF63 320 aa12.99□□□□□ -0.33
CCDC90B-201ENST00000260054 Q6ZS49 121 aa12.99□□□□□ -0.33
CCDC90B-201ENST00000260054 PRR18Q8N4B5 295 aa12.99□□□□□ -0.33
CCDC90B-201ENST00000260054 C11orf42Q8N5U0 333 aa12.99□□□□□ -0.33
CCDC90B-201ENST00000260054 GDPD1Q8N9F7 314 aa12.99□□□□□ -0.33
CCDC90B-201ENST00000260054 BEST4Q8NFU0 473 aa12.99□□□□□ -0.33
CCDC90B-201ENST00000260054 RFESDQ8TAC1 157 aa12.99□□□□□ -0.33
CCDC90B-201ENST00000260054 ARL11Q969Q4 196 aa12.99□□□□□ -0.33
CCDC90B-201ENST00000260054 THAP7Q9BT49 309 aaPredicted RBP12.99□□□□□ -0.33
CCDC90B-201ENST00000260054 RBMX2Q9Y388 322 aaKnown RBP12.99□□□□□ -0.33
CCDC90B-201ENST00000260054 WNK2Q9Y3S1 2297 aa12.99□□□□□ -0.33
CCDC90B-201ENST00000260054 ZNF729A6NN14 1252 aaPredicted RBP12.99□□□□□ -0.33
CCDC90B-201ENST00000260054 TRDCB7Z8K6 153 aa12.99□□□□□ -0.33
CCDC90B-201ENST00000260054 ORC5O43913 435 aa12.99□□□□□ -0.33
CCDC90B-201ENST00000260054 RBBP9O75884 186 aa12.99□□□□□ -0.33
CCDC90B-201ENST00000260054 MMP23AO75900 390 aa12.99□□□□□ -0.33
CCDC90B-201ENST00000260054 OMGP23515 440 aa12.99□□□□□ -0.33
CCDC90B-201ENST00000260054 GZMKP49863 264 aa12.99□□□□□ -0.33
CCDC90B-201ENST00000260054 ARF6P62330 175 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms