RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 URB1O60287 2271 aaKnown RBP10.26□□□□□ -0.77
CCNA1-201ENST00000255465 IGHV5-51A0A0C4DH38 117 aa10.25□□□□□ -0.77
CCNA1-201ENST00000255465 BLACEA4D250 179 aa10.25□□□□□ -0.77
CCNA1-201ENST00000255465 OR11H12B2RN74 326 aa10.25□□□□□ -0.77
CCNA1-201ENST00000255465 PSMB5P28074 263 aa10.25□□□□□ -0.77
CCNA1-201ENST00000255465 CCL20P78556 96 aa10.25□□□□□ -0.77
CCNA1-201ENST00000255465 ZNF154Q13106 437 aa10.25□□□□□ -0.77
CCNA1-201ENST00000255465 ANKRD55Q3KP44 614 aa10.25□□□□□ -0.77
CCNA1-201ENST00000255465 ZNF260Q3ZCT1 412 aa10.25□□□□□ -0.77
CCNA1-201ENST00000255465 C16orf82Q7Z2V1 217 aa10.25□□□□□ -0.77
CCNA1-201ENST00000255465 TRAPPC6BQ86SZ2 158 aa10.25□□□□□ -0.77
CCNA1-201ENST00000255465 OR11H1Q8NG94 326 aa10.25□□□□□ -0.77
CCNA1-201ENST00000255465 OR52M1Q8NGK5 317 aa10.25□□□□□ -0.77
CCNA1-201ENST00000255465 OR11H2Q8NH07 326 aa10.25□□□□□ -0.77
CCNA1-201ENST00000255465 MARCH1Q8TCQ1 289 aa10.25□□□□□ -0.77
CCNA1-201ENST00000255465 STARD4Q96DR4 205 aa10.25□□□□□ -0.77
CCNA1-201ENST00000255465 RAB11FIP5Q9BXF6 653 aa10.25□□□□□ -0.77
CCNA1-201ENST00000255465 LPAR5Q9H1C0 372 aa10.25□□□□□ -0.77
CCNA1-201ENST00000255465 OR51I2Q9H344 312 aa10.25□□□□□ -0.77
CCNA1-201ENST00000255465 ABI3Q9P2A4 366 aa10.25□□□□□ -0.77
CCNA1-201ENST00000255465 PXMP4Q9Y6I8 212 aa10.25□□□□□ -0.77
CCNA1-201ENST00000255465 MDC1Q14676 2089 aaKnown RBP10.25□□□□□ -0.77
CCNA1-201ENST00000255465 ACACBO00763 2458 aa10.25□□□□□ -0.77
CCNA1-201ENST00000255465 APC2O95996 2303 aa10.25□□□□□ -0.77
CCNA1-201ENST00000255465 TRAV8-7A0A075B6U6 113 aa10.25□□□□□ -0.77
CCNA1-201ENST00000255465 SIRPB1O00241 398 aa10.25□□□□□ -0.77
CCNA1-201ENST00000255465 CATP04040 527 aaKnown RBP10.25□□□□□ -0.77
CCNA1-201ENST00000255465 MAS1P04201 325 aa10.25□□□□□ -0.77
CCNA1-201ENST00000255465 FSTP19883 344 aa10.25□□□□□ -0.77
CCNA1-201ENST00000255465 NANOS3P60323 173 aaKnown RBP10.25□□□□□ -0.77
CCNA1-201ENST00000255465 RPL15P61313 204 aaKnown RBP10.25□□□□□ -0.77
CCNA1-201ENST00000255465 ARG2P78540 354 aa10.25□□□□□ -0.77
CCNA1-201ENST00000255465 ODF1Q14990 250 aa10.25□□□□□ -0.77
CCNA1-201ENST00000255465 PMCHL1Q16048 86 aa10.25□□□□□ -0.77
CCNA1-201ENST00000255465 PRSS53Q2L4Q9 553 aa10.25□□□□□ -0.77
CCNA1-201ENST00000255465 C2orf73Q8N5S3 287 aaPredicted RBP10.25□□□□□ -0.77
CCNA1-201ENST00000255465 LINC01555Q8NAE3 123 aa10.25□□□□□ -0.77
CCNA1-201ENST00000255465 OR2G3Q8NGZ4 309 aa10.25□□□□□ -0.77
CCNA1-201ENST00000255465 VN1R17PQ8TDU5 208 aa10.25□□□□□ -0.77
CCNA1-201ENST00000255465 TMEM255BQ8WV15 326 aa10.25□□□□□ -0.77
CCNA1-201ENST00000255465 EMG1Q92979 244 aaKnown RBP10.25□□□□□ -0.77
CCNA1-201ENST00000255465 RNF166Q96A37 237 aaPredicted RBP10.25□□□□□ -0.77
CCNA1-201ENST00000255465 WDYHV1Q96HA8 205 aa10.25□□□□□ -0.77
CCNA1-201ENST00000255465 POM121L2Q96KW2 1035 aa10.25□□□□□ -0.77
CCNA1-201ENST00000255465 C5orf66Q9H5L9 145 aa10.25□□□□□ -0.77
CCNA1-201ENST00000255465 G6PC2Q9NQR9 355 aa10.25□□□□□ -0.77
CCNA1-201ENST00000255465 CGGBP1Q9UFW8 167 aaPredicted RBP10.25□□□□□ -0.77
CCNA1-201ENST00000255465 MAP1BP46821 2468 aaKnown RBP10.25□□□□□ -0.77
CCNA1-201ENST00000255465 FREM2Q5SZK8 3169 aa10.25□□□□□ -0.77
CCNA1-201ENST00000255465 HEATR5AQ86XA9 2040 aa10.25□□□□□ -0.77
CCNA1-201ENST00000255465 IGF2RP11717 2491 aa10.24□□□□□ -0.77
CCNA1-201ENST00000255465 TMEM8BA6NDV4 472 aa10.24□□□□□ -0.77
CCNA1-201ENST00000255465 DDAH2O95865 285 aa10.24□□□□□ -0.77
CCNA1-201ENST00000255465 IFNA1P01562 189 aa10.24□□□□□ -0.77
CCNA1-201ENST00000255465 HLA-HP01893 362 aa10.24□□□□□ -0.77
CCNA1-201ENST00000255465 LIPFP07098 398 aa10.24□□□□□ -0.77
CCNA1-201ENST00000255465 PEBP1P30086 187 aaKnown RBP10.24□□□□□ -0.77
CCNA1-201ENST00000255465 TIMP3P35625 211 aa10.24□□□□□ -0.77
CCNA1-201ENST00000255465 GPR6P46095 362 aaPredicted RBP10.24□□□□□ -0.77
CCNA1-201ENST00000255465 RAB9AP51151 201 aa10.24□□□□□ -0.77
CCNA1-201ENST00000255465 SUPT4H1P63272 117 aaKnown RBP10.24□□□□□ -0.77
CCNA1-201ENST00000255465 ID2Q02363 134 aa10.24□□□□□ -0.77
CCNA1-201ENST00000255465 MFGE8Q08431 387 aaPredicted RBP10.24□□□□□ -0.77
CCNA1-201ENST00000255465 MSMO1Q15800 293 aa10.24□□□□□ -0.77
CCNA1-201ENST00000255465 HIST3H3Q16695 136 aa10.24□□□□□ -0.77
CCNA1-201ENST00000255465 GTF2H5Q6ZYL4 71 aa10.24□□□□□ -0.77
CCNA1-201ENST00000255465 RFLNBQ8N5W9 214 aa10.24□□□□□ -0.77
CCNA1-201ENST00000255465 FLVCR1-AS1Q8TAF5 88 aa10.24□□□□□ -0.77
CCNA1-201ENST00000255465 SFRP2Q96HF1 295 aa10.24□□□□□ -0.77
CCNA1-201ENST00000255465 SIGLEC12Q96PQ1 595 aa10.24□□□□□ -0.77
CCNA1-201ENST00000255465 TSPAN32Q96QS1 320 aa10.24□□□□□ -0.77
CCNA1-201ENST00000255465 FAM110AQ9BQ89 295 aa10.24□□□□□ -0.77
CCNA1-201ENST00000255465 NUDT9Q9BW91 350 aa10.24□□□□□ -0.77
CCNA1-201ENST00000255465 SMIM3Q9BZL3 60 aa10.24□□□□□ -0.77
CCNA1-201ENST00000255465 ZNF581Q9P0T4 197 aa10.24□□□□□ -0.77
CCNA1-201ENST00000255465 TBL2Q9Y4P3 447 aaKnown RBP10.24□□□□□ -0.77
CCNA1-201ENST00000255465 TRAV9-1A0A075B6T8 112 aa10.23□□□□□ -0.77
CCNA1-201ENST00000255465 B4GALT2O60909 372 aa10.23□□□□□ -0.77
CCNA1-201ENST00000255465 LILRA1O75019 489 aa10.23□□□□□ -0.77
CCNA1-201ENST00000255465 PITX3O75364 302 aa10.23□□□□□ -0.77
CCNA1-201ENST00000255465 RHBDL1O75783 438 aa10.23□□□□□ -0.77
CCNA1-201ENST00000255465 TRAPPC6AO75865 159 aa10.23□□□□□ -0.77
CCNA1-201ENST00000255465 BCL2P10415 239 aa10.23□□□□□ -0.77
CCNA1-201ENST00000255465 HRH1P35367 487 aa10.23□□□□□ -0.77
CCNA1-201ENST00000255465 CYB561P49447 251 aa10.23□□□□□ -0.77
CCNA1-201ENST00000255465 RAB31Q13636 194 aa10.23□□□□□ -0.77
CCNA1-201ENST00000255465 KIR2DS3Q14952 304 aa10.23□□□□□ -0.77
CCNA1-201ENST00000255465 RNFT1Q5M7Z0 435 aa10.23□□□□□ -0.77
CCNA1-201ENST00000255465 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.23□□□□□ -0.77
CCNA1-201ENST00000255465 RAB42Q8N4Z0 105 aa10.23□□□□□ -0.77
CCNA1-201ENST00000255465 DEFB125Q8N687 156 aa10.23□□□□□ -0.77
CCNA1-201ENST00000255465 MRPL24Q96A35 216 aaKnown RBP10.23□□□□□ -0.77
CCNA1-201ENST00000255465 HSPB9Q9BQS6 159 aa10.23□□□□□ -0.77
CCNA1-201ENST00000255465 BANF2Q9H503 90 aa10.23□□□□□ -0.77
CCNA1-201ENST00000255465 PEF1Q9UBV8 284 aaKnown RBP10.23□□□□□ -0.77
CCNA1-201ENST00000255465 PRSS50Q9UI38 385 aa10.23□□□□□ -0.77
CCNA1-201ENST00000255465 SPACA6W5XKT8 324 aa10.23□□□□□ -0.77
CCNA1-201ENST00000255465 AHCTF1Q8WYP5 2266 aa10.23□□□□□ -0.77
CCNA1-201ENST00000255465 TRAV26-1A0A087WT03 109 aa10.23□□□□□ -0.77
CCNA1-201ENST00000255465 DIRC3C9JPN6 131 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms